Acipenser ruthenus (sterlet): 117435510
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Entry
117435510 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117435510
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117435510
09142 Cell motility
04820 Cytoskeleton in muscle cells
117435510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
TS_C
DUF948
Motif
Other DBs
NCBI-GeneID:
117435510
NCBI-ProteinID:
XP_033914651
LinkDB
All DBs
Position
4:38631194..38703498
Genome browser
AA seq
3141 aa
AA seq
DB search
MKLVTNLEGKRREKGDSGWKRTITSICEKSFTVIFCESQTTPHAEGKMKIYLSLIVLMIC
ASSVECNQRGLFPAILNLASNAEITANASCGETGPEMFCKLVEHVPGRPIRNPQCRVCDS
TSPNPRERHPISNAIDGTNNWWQSPSIKNGRQNHWVTITLDLRQVFQVAYIIIKAANSPR
PGNWILERSIDGIEFQPWQYHAISDTECLTRYNVTPRIGPPTYKRDDEVICTSYYSRLVP
LEHGEIHTSLINGRPSADDLTPALLEFTSARYIRLRLQRIRTLNADLMTLSYRDPKDVDP
IVTRRYYYSIKDISVGGMCICHGHAQSCPWDETTKKLQCVCEHNTCGESCNKCCPGYHQK
PWKPGTLSVGNTCEKCNCHNKTEDCYYNQTVASSMMSMNIDGQFVGGGVCIDCTQNTAGI
NCETCVDGNYRPHKVSPYDENPCVECGCDLNGSQHPVCIKDDNHADLQNGLLPGKCHCKE
GYAGEKCDRCSFGYSGYPYCVKCNCSLIGSIHFDPCVEQCTCKENVMGDNCDLCKRGYYN
LQKSSPEGCTECFCFGVSDVCESISWPLTQVLNIDDWLMPVRPIPITSGTRFDHDDSNHI
SKESRILPPQSSWSAPESFLGNKLTAYGGYLNYTLSYDVPVESLHLQLMSNFDVVIEGNG
KTLHTRFNAQLLLQPYKEQTVAVEMLPRNFMDFYTSRAIERDRLMTVLANLTRLQIRASF
NNTSNAVLRLSSVSLDTATVNAIDLKPAMDVEHCECPWGYTGTSCESCSPGHYRVDGILF
GGICRLCECNGHATECDIHGVCSDCKHNTIGPHCEQCMPGFYGDPSDGMPDDCQVCACPL
NIPSNNFSPTCHLDSAGEVMCDQCVPGYEGPRCERCANGYYGDPTVPGELCVPCDCNGNV
NPLEPGHCDTRTGECLKCVENTAGSHCERCADGYFGDAIVAKNCQDCGCHVNSSYSSVCD
LESGKCKCRPNVTGEKCDQCMPGHFGLSSGLGCQTCNCNLAGSLSDTCDDEGQCPCVPGV
AGEKCDRCARGFYDFQDDGCTPCDCAHTHNNCNTETGQCICPPHTAGVKCELCEANHWGH
DSKLGCKPCDCSLVGSSSSQCDLSSGWCQCNSEFGAEKCNECALGFRAYPECTACNCSII
GTREEYCDEKQGVCGCDKDSSTCSCKVNVVGPGCDECKLGTFALSADDPLGCSPCFCFGV
SETCEELGGLVRIPIILTPDQETLHVVSQSDLSGTLDGVFLQSPDILLDAALVKQSLHTE
PFYWRLPEQFQGNKLLAYGGKLRYTAAFYALEGSGISNFEPQLLIKGGRTSKLNIYRDVP
APDNGVETSQEIDLKEREWKYFNSVSDQAVSHSDFMSVLSNIQYILIKASYGSDLQQSRI
SNISLEIAVDSDEMNAGRETARGIERCKCPSGYAGLSCQECAPGFYRQSLTELNVRGPRP
LIEPCVSCQCNNHSQTCDLDTGKCQGCQDNTADDHCDLCAPGYYGKVRGSISDCSLCACP
QGNTNSFSPTCVLEGVDDFRCNACMPGYEGQYCERCSLGYYGNPNEPGGSCQLCKCNPTG
SVHNLCDKLTGHCVCKPGVRGLLCDECEPRHILMGTECMSCNDNCTGVLLNDLENLELSM
QSVNLTGVILAPYSLLASLENTTDEIKMFLSPERNSSFLLKKAEEQLSGLTKDIDQLHQK
TTQAYGDGQDLNKSTERMVNQSQELLDSITKVQTAIQALVELGSNLNNTLGNNLVLTNST
QLLDEVSAVLEKMRNKAFTQQHQNATHEFKAAEALLLQVQREFQKPQKDVMELKERIVTI
LSEHSSKLQDAQNLVNESFTKANETNHILHAMSSNLAVFYDKKQNVSSNHFLTTEMIEEA
QATMTEGLNIATDVVNATSQLEGHKDELALWNPKLRKQVDNLVMQMTKRSVLDLVYKAED
HAAGLKKLADSLHNVLSGVRNVSFNATNAAQANSNIKINIEKAERLAEQANSTAAAAWSL
ALFADHSLKDAGAKSLQQSSRLLSEAADLNNKTNGLISDLNGLKEQVDKIRYNAQNISKQ
LSEPLQLLSSIPNNVSVKVLEAKEHAMGANVSAVAALQHLEDFSQKLEESSSAMIRANET
VKRTNELFSDSAKTANAAEKKVQEVETQTNLLFERLKPLKMLEDTLSRNLSEIKELIDQA
RKQAASIKVAVAAEQDCVRAYKPDISSSNYNTLTLIVKTSESDNLLFYLGSSTNVDFMAL
EMRRGKVSFLWDVGSGFAKLEYPDIQINNDKWHSIHATRFGKTGSLTVQELKSSQTPTVK
TATSPGTSTVLDVNKSTLVFVGGLGGQIKKSSAVKMTHFKGCMGGASLNGNNIGLWNYAE
REGKCRGCFMSPQDEDTSFHFDGSGYSVVEKALRSTVTQIVMLFKTFSPNGLLLYLASNG
TRDFTSIELVDGKVRLTFELGSGPLSLITDKTYNSGNWYKIAFHRTKQKGYLAVMDAYIP
TNRETKEGTTSGSASDLNRSDKDPIYIGGLPRSRPVRRQLVTRSYVGCIKNLEIARSNFD
LLKESYGVKKGCVLEPIRSVTILNEGFLELHPMSLAPESELMATFSTKNDTGIILAGISK
GGKRRRRQTHLPFFAVMLINGQVEVHMNTGEKGHTRKAVVKSPAGTYSDGEDHSVILHRS
KRLLTVQVDEGSLTEMRLAPSAESSPLNVSSFYIGGVPPGDGADMLKTGKSFYGCIRNMG
YNMELLDLTTAVSYHNVDMDSCLLAERPKPVIQPEEGDLESELQPSPTPARPVSTIEQSS
KTQGPAKCVEEEIPAIVPNAHQFGLTKTSHMVLSFDESTVRKKFSIQLTFRTFASDGLVY
FMAHQNQVDYAALQLMEGHLYFIYDLGKGSARVTRPHVVNDGQWHTVKTDFAKKKATITV
DGKESSPVEAVGEGNTLDVEGKLYLGGLPLDFTAKNIGNVTHSVPACINNVMLNNKPLDR
DNPISVYAVNRCYETAQKGTHFDGTGFAALAKGYKVRSDLIISFEFRTPLQNGVLLGISS
AKVDAVGLELVSGKILFHVNNGAGRITTTYSPSDSSSLCDGKWHKLQANKSKHWFSLTID
GQTVRANNPYPQSTSAETNNPIYVGGFPANVKQNCLTIKTPFQGCMRSLRLVKGQHSEAY
DFSGAFELRGVFPNSCPGAQH
NT seq
9426 nt
NT seq
+upstream
nt +downstream
nt
atgaagctagtgacaaacctagaaggaaaaagaagagagaaaggggattccggttggaaa
cgaacaataacaagtatttgcgaaaaatcattcactgtcatcttctgtgaaagtcaaact
actccacatgcagaggggaaaatgaaaatctacttatcattaattgtgctgatgatatgt
gcatcctccgtggagtgcaatcaaagaggtctttttcctgccattctgaatttggccagc
aatgcagaaatcactgccaatgccagctgtggagagactggacctgagatgttctgtaag
cttgtggagcatgtcccaggcagacctattcgcaacccacagtgccgggtctgtgacagc
acaagtccgaatcccagagagcgacatccaatctcaaatgcaatagatggcaccaacaac
tggtggcagagtcccagcatcaagaacggcaggcagaaccactgggtaacaatcaccctg
gatttgcgacaggtcttccaagtggcatatatcatcatcaaggctgccaactctcctcga
cctgggaactggattctggaacgttctattgatggcattgagtttcagccttggcagtac
catgctatcagtgacacagagtgcttaacacggtacaatgtcacaccaaggataggacca
ccaacctacaagagggacgatgaagttatctgcacatcctactattccaggctggtcccg
ctcgaacatggagagatccacacatccttgatcaatggcagacctagtgcagatgacctc
accccagccctgttggaattcacctcggctcgatacatccgccttcgcctgcagagaatt
agaacactcaacgctgacctcatgactctcagctaccgggaccccaaagacgtagaccca
attgtaacccgcaggtattactactccatcaaggatatctctgttggaggaatgtgtatc
tgccatggacatgctcaaagttgtccctgggatgaaacaacaaagaaactacagtgtgta
tgtgagcacaatacttgtggggagagctgtaataaatgttgccccggctaccaccagaaa
ccctggaaacctggaactctctcagttggcaacacttgtgaaaaatgcaactgtcataac
aaaacagaagactgttactacaaccaaactgtggccagtagcatgatgagcatgaatatc
gatggtcagtttgttggtggaggtgtctgcattgactgtacccagaacaccgctggcatc
aactgtgaaacctgcgttgatggcaattacagaccacacaaggtatctccttatgatgag
aatccatgtgttgagtgtgggtgtgacttgaatgggtctcagcatccagtttgcataaag
gatgacaatcatgcagatctccagaatggtttgcttccagggaagtgtcactgcaaagag
ggctatgctggagagaagtgtgatcgctgttcctttggttacagtggatatccctactgt
gtgaagtgtaactgcagtttgataggcagtattcattttgacccctgtgtggagcagtgc
acatgcaaggaaaatgtaatgggtgacaactgtgacctctgtaaacgagggtattacaac
cttcaaaagagcagccctgaaggctgcacagagtgtttctgtttcggagtgtccgatgta
tgtgagagtatttcctggcctctaactcaggttttaaacattgatgactggttgatgcct
gttcgtccaattcccattaccagtggtaccagatttgatcatgatgactcaaaccacatt
agcaaagaaagcaggatattaccaccccagtcctcctggtcagctcctgaaagctttttg
ggaaacaagctgactgcttatggagggtacttgaactatacattatcttatgatgttcct
gtggagagcctgcacctccagttgatgtctaattttgatgttgttattgagggaaatggc
aagactttgcacacaaggttcaatgctcagttgctgctgcagccctacaaggagcagact
gttgctgtggagatgctgccaaggaacttcatggacttctacaccagtagagccatagag
agggacaggctgatgactgtcctggcaaacctaacccgtctgcagattcgggcatccttt
aacaacaccagcaatgcagttctaaggttaagttctgtatctttggacacagctactgtg
aatgctattgatctaaagcctgcaatggatgtggagcactgtgagtgtccatggggttat
actggaacgtcttgtgagtcttgcagccctggtcattatcgagttgatgggattctgttt
ggaggcatttgccggctatgtgaatgcaatggccacgccactgaatgtgacattcatggt
gtctgctctgattgcaagcacaacaccatagggccccactgtgagcagtgcatgcctggt
ttctatggtgacccatccgatgggatgcctgatgactgccaggtctgcgcctgtccgctc
aacatcccatccaacaatttcagccctacctgccacctggacagcgctggagaagtgatg
tgtgatcagtgtgtgccaggttatgagggacctcggtgtgaaaggtgtgcaaatggttac
tatggggatcctactgtgccaggggaattgtgtgttccttgtgactgcaatggcaatgtg
aacccacttgaacctggccactgtgacacacggactggagaatgtctgaaatgtgttgag
aatacagcaggaagccactgtgagaggtgtgcagacgggtactttggagatgctattgtt
gctaaaaactgccaagattgtggctgccatgtgaacagctcctactccagtgtctgtgat
ctagagagcggaaagtgcaagtgcaggcccaacgtcactggggagaaatgtgaccagtgt
atgcctggtcacttcggcttgagcagtggtcttggttgtcagacctgtaactgcaatctg
gcagggtcactctctgacacctgtgacgatgaaggacagtgtccctgtgtcccaggagtg
gccggagagaaatgtgacaggtgtgcccgtggcttttatgacttccaagatgacggctgc
acaccctgcgactgtgcccacacacacaacaactgtaacacagagacgggccagtgcatc
tgcccacctcacactgcaggagtgaaatgtgagctctgcgaggccaaccactggggtcat
gattctaaactgggatgcaagccgtgtgattgcagtcttgttggctcgtccagctctcag
tgcgacctgtccagtggttggtgtcagtgcaattcggagttcggggcagagaagtgtaac
gagtgtgctctgggattcagagcctacccagagtgcacagcctgcaactgcagcattatt
ggtacaagagaagagtactgtgatgagaagcagggtgtgtgtggctgcgacaaggactcg
agcacttgttcttgcaaggtaaatgtggttggccctggatgtgatgagtgcaagctgggg
acctttgccctttctgctgatgacccgttgggttgcagcccttgcttctgctttggagtg
tccgagacttgtgaggaactcggaggacttgttaggattcctatcatccttacacctgac
caggagaccctgcatgtagtcagtcagagtgacctgtctggaacgctggatggtgtgttc
ctgcaatctccggacattctgctggacgctgcactggtcaagcaatcactacacactgag
cctttctactggagattaccagagcagtttcagggcaataagttgttggcctatggagga
aagctgaggtatactgcagctttttatgcccttgaaggctctggcatctctaacttcgag
cctcagttgcttattaaaggaggacgcacgagtaagctcaatatatacagggatgtgcct
gctcctgacaatggggtggaaaccagccaagagattgacctgaaggagcgtgaatggaag
tatttcaactcggtctccgaccaggctgtctctcactctgatttcatgtctgtgctcagc
aacattcagtacattctcatcaaagcctcctatgggagtgatttacagcagagcaggatt
tccaacatttctttagagattgcagtggattcagatgaaatgaatgctggtagagaaaca
gcacgtggcatagagagatgtaaatgcccatcaggttatgctggcctttcatgtcaggag
tgtgccccaggattctacaggcagagtctgacagagctcaatgttcgggggccacgtcca
ctgattgaaccctgtgtgtcgtgccagtgcaacaaccacagccagacttgtgatctggac
actgggaaatgtcagggttgtcaagacaacacagcagatgaccactgcgatctttgtgca
ccaggatactatggaaaagtccgggggtcaattagtgactgctcgctctgtgcctgtcca
cagggcaacacaaacagtttcagccccacttgtgttctggagggtgtagatgacttcagg
tgtaatgcctgcatgccaggatatgaaggacagtactgtgaaagatgctctttgggttac
tacgggaacccaaatgagcccggtggtagctgtcagctgtgcaaatgcaatccaactgga
tcggttcacaatctctgtgacaaactcacaggccactgcgtgtgcaagccaggagtgagg
ggtctcctttgtgacgaatgtgaacccagacacatcctgatgggcactgaatgcatgtcg
tgcaatgataactgcacaggagtgctgctgaacgacctggagaacttggagctgtctatg
cagtctgttaacctgacaggagttatcctagcaccttacagtctgctggcttcattagag
aataccactgatgaaataaagatgtttttatcccctgagaggaattccagcttcttgtta
aagaaggctgaagaacagctgtctgggcttactaaagatatcgatcagctgcatcagaag
accacgcaggcttatggcgatgggcaggatcttaataaatctacagaaaggatggttaac
cagagtcaagagcttttggattctattaccaaagttcagacagctattcaagctcttgtc
gaactagggagtaacctgaataacactcttggcaataatctggtgctaaccaacagcaca
caactactggatgaggtctctgcagtgctggagaagatgagaaacaaagcttttacccag
cagcatcagaatgccacacatgagtttaaagctgccgaagcccttctcctgcaggttcag
agggagtttcagaagccgcagaaagacgttatggagctgaaggagagaatagtcactatc
ctctctgaacacagcagcaagctgcaagatgcccaaaacctggtgaatgagtctttcacc
aaggccaacgaaacaaaccatattcttcatgccatgtcaagcaatctggcagttttttat
gataagaaacagaatgtcagtagcaaccacttcttgacaactgagatgattgaagaagca
caagcaacgatgactgagggcttgaatattgcgaccgatgttgttaatgcaacttctcag
ctagaggggcacaaagatgagctggccctttggaaccctaagctgagaaaacaagtagat
aaccttgtgatgcagatgacaaagagaagcgtgctggacctggtgtacaaggcagaggac
catgctgctggactgaagaaactggcagactcacttcacaatgtgctttcaggtgtaagg
aatgtttcgttcaatgcaacaaatgctgcccaagccaactctaatatcaaaatcaacatt
gaaaaagcagagcgtttggcagaacaagcaaacagcactgcagctgctgcctggagtttg
gccctgtttgctgaccactctttgaaagatgctggagcaaaatctctgcagcaaagctcc
aggcttctatctgaggccgctgatctgaacaataagacaaatggtctcataagtgattta
aatggactgaaggagcaggtggacaagattcgatacaatgcccaaaatataagcaaacag
ctcagtgaaccactgcagctactgagctccattcccaacaatgtcagtgtgaaagtcttg
gaagcaaaggagcatgctatgggagcaaatgtctcggctgttgcagctctccaacacctt
gaagatttcagccagaaactagaggaatcctcttcagcaatgatcagagccaatgaaact
gtgaagcgaacaaatgaacttttcagtgattctgcaaagactgctaatgcagcagagaaa
aaggttcaagaagtggaaacgcaaaccaacctgctctttgaacggctgaaaccgctgaaa
atgctggaagataccctgagcaggaacttgtctgagattaaggaactgatagaccaggca
cgaaaacaagcagcttcaattaaagtggcagtggctgctgaacaagactgcgtacgtgcc
tacaaaccagacatctcctccagcaactacaacactctgacgctgatagtgaaaacatcg
gagtctgacaacctgctcttctacttgggcagcagcactaatgttgattttatggctctg
gaaatgcgacgtggaaaagtgtcttttctctgggatgtaggctctggatttgcaaagttg
gagtaccctgacattcagattaacaatgacaagtggcacagcattcatgcaaccaggttc
ggaaagactggttctcttactgttcaggaattgaaatcttcacagacccccactgtaaag
acagcaacctcccccggcacatcgactgtgctagatgtgaataaatccactcttgtcttt
gtggggggtcttggtggtcaaattaagaaatcttcggctgtgaaaatgacccacttcaaa
ggctgtatgggaggggcttcgctcaacgggaataatattgggctgtggaattacgcagag
agagaaggcaaatgtaggggctgcttcatgagtccccaggatgaagacacttccttccat
tttgatggcagtgggtattccgttgttgaaaaggctcttcgctcaacagtcacacaaata
gtgatgcttttcaaaaccttctctccaaatggattgctactttacctcgcttctaatgga
acgagagatttcacatctatcgagctggtggatggcaaagtcaggctgacctttgagcta
ggatcaggaccactcagcctcatcacagataagacatacaacagtggaaactggtataaa
attgctttccaccgtaccaaacagaaaggttacttggctgtgatggatgcatatattcct
acaaatagagaaactaaagagggcactacctctggttctgcctcagatctcaatcgttca
gacaaggaccccatttatattggtgggctgcctcgctcaagacccgtcaggagacagctt
gtgaccagatcttacgtgggctgcatcaaaaatctggagattgcccgctctaactttgac
ttgctgaaggagtcctatggggtcaagaagggctgcgtattggagccaattcgcagtgtg
acaatcttgaatgagggattcctcgaacttcaccccatgtctctggcacctgaatcagaa
cttatggcaaccttctccacaaagaacgacaccggcattatcctggcgggaatcagcaaa
ggaggaaagcgcagacgaaggcagacacacctgcccttctttgcagttatgcttatcaat
ggccaagtggaagtccacatgaatacaggagagaaaggccacactagaaaagctgtggtc
aaatctcctgctggaacctacagtgatggagaggaccattctgtcatcctgcatcgcagc
aagaggttgttgactgtgcaggtggatgagggaagcctgactgagatgagacttgctccg
tcagcagagagcagccctctcaatgtctccagcttctacattggaggtgttccacccggc
gatggcgctgacatgctcaagacgggcaaatccttctacggctgtatcaggaacatgggc
tacaacatggagctcctggacctcaccactgcagtgagctatcataacgtggacatggac
agctgcctgctggcggagaggcccaagccagttatccagccggaggagggtgatctagag
tctgagctccagccgtctcccactccagccaggcctgtctccactatagaacagagctcc
aaaacccagggcccagccaagtgtgtagaagaagagattccagcaatagtccccaatgcc
caccagtttggcctgaccaaaactagtcacatggttctgtcttttgatgagagcacagta
agaaaaaagttttccatccagttaaccttccgaacctttgcatcagatggcctggtttac
ttcatggcccaccaaaaccaggttgattatgcagctctgcagttgatggaggggcacctg
tatttcatctatgaccttggcaagggttcagcgagagtgacacgcccacatgtagttaat
gatggccagtggcacacagtgaaaacagattttgctaagaagaaagctacaatcactgtt
gatgggaaggagtcatctcctgtcgaggctgtgggagagggaaacaccttggatgtggaa
ggaaaactttacctgggaggtctccctctggacttcactgccaagaatattggaaatgtg
acacacagtgttcctgcctgcatcaacaatgtaatgttgaataacaagccactggacaga
gacaatcccatctctgtatatgcagtaaacaggtgttacgagacggctcaaaagggaaca
cactttgatggaactggatttgcagctttagcaaaaggctacaaagtcaggtcagacttg
attatctcatttgagttccgtacgccactgcagaatggagtactgctgggaataagcagt
gccaaggtggatgcagtaggactggaactcgtcagtggcaagattttatttcatgtgaac
aatggggcaggaagaataaccactacctacagtccaagtgactccagcagcctctgtgat
gggaagtggcacaaactccaggctaacaaaagcaagcattggttcagtctaaccatcgat
ggacaaacagttcgggcaaacaacccctatccccagtctacatctgctgagaccaacaac
ccaatctatgtgggaggttttcctgccaatgtgaagcagaactgcctaactatcaagact
ccattccagggctgcatgaggagcctcaggctcgtcaaaggacagcacagcgaggcctac
gacttcagcggagcttttgaactgcgtggggttttccccaactcctgcccaggtgctcag
cactaa
DBGET
integrated database retrieval system
