Acipenser ruthenus (sterlet): 117435659
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Entry
117435659 CDS
T07327
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117435659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117435659
03036 Chromosome and associated proteins [BR:
arut03036
]
117435659
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117435659
Coactivators
SAGA/TFTC/STAGA complex
117435659
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117435659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
BD-FAE
Motif
Other DBs
NCBI-GeneID:
117435659
NCBI-ProteinID:
XP_033914888
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All DBs
Position
4:33694194..33765801
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AA seq
891 aa
AA seq
DB search
MDVTGGVCVPSANGTFAKMPTPDTSNNHVEVTQIQPESYNKIQSVNGGNVSVNFMSCQSS
AMFVDTNSAALTTATTRPSDVKAVSNDQTTLVSAATMSDSAPNNQTFPQSPCKPQTGIIV
PKSPGSVIQKSVVISSSSNSEITTNTLNTSANMPASLDSTVPKIVVHTSKPGASVHAIIG
SKSVQESTTMTSVSHCQHSQTVHLSGQTSKGKSLAPASQTGMVTTTSVASTSKVTRVAAI
TQTPGKGTVLAVPRVSTPQQNGIARAPQTTTIQLPANFKIPQGMVLIRSDKGQLMLVSQQ
ALAQAQAQGARLPRPAVTTPTLRAPTPQAAATTTLRKQESATIVKNQSQQISPAVTSVQR
MPVVKTTGIAVSATSVQTVRPPATTPAPAPTTIEGSKAESIAQSPVSAETVENAKKCKNF
LVTLIKLASSGTHSAEMAKNVKELVWNLLDAKIEPEEFTDRLYTELKSSPQPYLVPFLKR
SLPAVRQLTPNSQLFIQQCVLQKDGIVSTAAITAQQAVKQTSVTVIANSKTREPAELAQS
VKPAHPVKPAQPAQLIVQQTRGDVVKPPASIAQSQQSTQIVNRIQLKTPVTTTFQSSPCP
AGIVVKQASLLGPKVIRVHAPLIQKNNLKENGAALFRDEDDINDVASMAGVNLNEENARI
LATNSELVGSVIRSCRDEPFLLTSVLQKKILETGKRHGITEVNPDVVSLVSHATQERLWT
LVEKMTVAAQHRTRSYKDDSRNVLLNDTRSQLKFFEQLDRLEKQRKDEQEREMLLRVAKS
RSNKEDPDQLRLKQKAKEMQQLELAEMQQRDANRTALAAIGPRKKRPLDSLGYGSGSEIG
SGDVTGASQSAIPKQFSRLRTTRASLKDLIFCMEQEQAMRQSITLYRAFLK
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgacaggtggggtttgtgtcccctctgcgaatggaacatttgcaaaaatgcca
acgccggatacttcaaacaatcatgttgaagtaacacaaatacaaccagaaagttacaac
aaaatccagagtgtcaacggtggaaatgtgtctgtaaacttcatgagctgccagtcgagt
gcaatgtttgttgatacaaatagtgcagctttgaccacagctacgactcgtccaagtgac
gtcaaggcagtttccaatgaccagacaacacttgtatcagcagcaactatgtcagattct
gctccaaataatcaaacttttccacagagtccctgtaaaccacaaacgggaattattgtg
cccaaatcacctggttctgtaatacagaaatcagttgtaatttcttctagttcaaatagt
gagataactacaaatactttaaatacatctgcaaatatgccagcatcattagacagtaca
gtacccaaaatagttgtacatacaagtaagcctggagcaagcgtacatgcaatcataggt
agtaagtcagttcaggagagtacaaccatgaccagtgtcagccattgccaacattcgcag
actgtacatttatcaggacagacaagcaagggcaaaagtttggcacctgcatctcagact
ggaatggtaacaacaacttctgtggcatctacctcaaaagtgacaagagtagccgccatc
actcagacacctgggaaggggactgtacttgctgtaccaagagtgagtactcctcagcaa
aatgggatagcacgggctccacagaccactacaatacagctacctgcaaactttaaaatc
ccacaagggatggtacttatcagaagtgacaaaggtcagctgatgttggtatctcaacaa
gccttagcccaagctcaagcacaaggtgctcgactccccaggcctgccgttactacgcct
actctacgagctcctacgccacaggccgctgcaacaacaactcttagaaaacaggagtct
gcgaccattgtcaaaaaccaatctcaacaaatcagccctgccgtcacgtcagtgcaaagg
atgccagtagtaaagaccacaggaattgctgtttctgcaacatcagttcaaacagtgaga
cccccagccacaaccccagccccagctcctaccacaatcgagggatccaaagcagagtct
attgcacagagccctgtctctgcggagacagtagagaatgcaaaaaagtgcaagaatttt
cttgtgacattaattaagctagcctccagtggaacccattctgctgaaatggcaaagaat
gttaaggagttggtgtggaaccttctggatgcaaaaattgaaccagaagaatttacagac
aggttgtacactgaactgaagtcctccccacagccttaccttgtgccgttcctcaagaga
agtttaccagctgttcgccagctgaccccaaactctcagctcttcatccagcagtgtgtt
ctgcagaaagatggcattgtctccacagccgcaatcacagcacaacaggctgtgaaacag
acttctgtaacagttattgccaacagcaaaaccagagaacctgcagagctcgcacagtca
gtgaaacctgcacacccagtgaaacctgcacagccagcacagctgatagttcagcaaaca
agaggagatgtggtaaaaccaccagcaagcattgcgcaatcccagcaatcaacacagatt
gtgaacagaatccagctcaagactccggtgacaaccactttccagtccagtccatgtcct
gcaggcattgttgtaaagcaggcatcacttctaggacctaaagttatccgtgtgcatgca
cccctgatccagaaaaacaatctcaaagaaaatggagcagcccttttcagagatgaagat
gacatcaatgacgtggcttctatggctggagtcaacttgaatgaagagaatgcacgtatc
ttagccacaaactctgagttggtgggatcggtaataagatcctgcagagatgagccgttc
cttctaacatctgttctgcaaaagaaaattttggaaacaggtaagagacatggcattaca
gaagtaaatccggatgttgtgagtcttgtctctcatgccacacaggagcgcttatggaca
ttggtagaaaaaatgactgtggcagcacaacatcggacaagatcatacaaggatgatagt
cgaaatgtgctgctgaatgacactcgatctcagctgaagttctttgagcagcttgatcgt
ttggaaaaacaaagaaaagatgaacaggaaagagaaatgttgctacgtgttgcaaagagt
cgctccaataaagaagatccagaccaactgagattaaaacagaaagcaaaagagatgcag
cagttggaactggcagagatgcaacagagagatgcaaatcgaacagcgcttgcagccatc
gggccaaggaaaaaacgaccattggactccttaggctatggatctggtagtgagattggc
agcggagatgttactggtgcctctcagtcagcgattccaaagcagttctcccgtctaagg
acaacccgtgccagtctcaaggacctcatcttctgcatggaacaggagcaagccatgagg
caatcaatcaccttgtatcgtgccttcctcaaatag
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