Acipenser ruthenus (sterlet): 117962374
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Entry
117962374 CDS
T07327
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04260
Cardiac muscle contraction
arut04261
Adrenergic signaling in cardiomyocytes
arut04814
Motor proteins
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117962374
04820 Cytoskeleton in muscle cells
117962374
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117962374
04261 Adrenergic signaling in cardiomyocytes
117962374
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117962374
04147 Exosome [BR:
arut04147
]
117962374
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
117962374
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of microglial cells
117962374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
CCDC39
TMF_DNA_bd
PUMA_CC
CALCOCO1
Sec2p
Rod_CreS
HAUS1
DUF3450
KIF21A_4th
DUF1664
EzrA
ERM_helical
DUF745
ADIP
Fez1
Lebercilin
FKBP15
CENP-F_leu_zip
Terminase_7
Motif
Other DBs
NCBI-GeneID:
117962374
NCBI-ProteinID:
XP_034763236
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All DBs
Position
27:22800340..22815414
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AA seq
326 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDEINELEKKLRVTEDDRDRL
LEGFQSAEEKLLSSDENATKLDDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKA
TDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDE
EKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELSEGKCAELEEELK
TVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERTVAKLEKSIDDLEE
KLAQAKEENLNMHQMLDQTLLELNNL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggaaaatgccttggac
agagctgagcaggctgagtcagacaagaaggcagccgaggacaggagcaaacagttagag
gatgaaattaatgaattggaaaagaaattacgtgttaccgaagacgacagagatagactg
ctcgaggggttccagtctgctgaagaaaaattgctaagttctgacgaaaacgccacaaag
cttgacgatgagctggtgtcactgcaaaagaaactcaagggcactgaagatgaactggac
aaatactccgaggctctcaaagatgcccaggagaaactggagctggcggagaagaaagcc
accgatgctgaggctgatgtagcttccctgaacagacgcatccagctggttgaggaagag
ttggatcgtgctcaggagcgactggccactgccctgcagaagctggaggaggctgagaag
gcagctgatgagagtgagagaggcatgaaggttattgagaacagagccctgaaggatgag
gagaagatggagctgcaggagatccagcttaaagaggccaagcacattgctgaggaggct
gaccgcaaatatgaagaggttgcacgtaagctggtgatcattgagagtgatctggagcgt
actgaggagcgtgctgagctgtcagaaggcaaatgtgctgagcttgaagaagaattgaaa
actgtgaccaacaacctgaagtcactggaggcacaggccgagaagtactctcagaaggaa
gacaaatatgaagaggagatcaaggttctctctgacaagctgaaggaggctgagacccgt
gctgagttcgctgagaggaccgttgccaagcttgagaagagcattgatgacttggaagag
aaactggcacaggctaaagaagagaacctcaatatgcaccagatgctggatcagactctt
ctggaactgaacaatctgtga
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