Acipenser ruthenus (sterlet): 117962483
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Entry
117962483 CDS
T07327
Name
(RefSeq) neurexin-1-like isoform X1
KO
K07377
neurexin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117962483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117962483
Membrane trafficking [BR:
arut04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117962483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
117962483
NCBI-ProteinID:
XP_034770978
LinkDB
All DBs
Position
54:1074803..1501413
Genome browser
AA seq
1704 aa
AA seq
DB search
MATFFPSKVLSRLGIFMAFLVFGGAMALEFGGAPGQWARYARWEAGSMGELSFSIKTNAS
KALVLYLDDGGNCDFLELLISDGRLQLRFAISCAEPATVHLDTPVSDDRWHMVLLTRNYR
ETMLVVDSEAKVSEVKSKRRDMSVVSDLFVGGIPPDVRLSALTSSTVKYEPPFRGLIANL
KVGETPPNLLSSQGIQSDLEYLCTKQNPCLNGGLCSIHHGEVRCDCSLTRYQGKFCNEEE
HSVEGLAHLMLNSQGDTSQAGKEESVATFKGNEFFCYDLSHNPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNNWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LKDVVYKNNDFKLELSRLAKEGDPKMKVEGDLVFRCENVAALDPVTFESPEAYIALPKWN
TKKTGSISFDFRTTEPSGLLLFSHGRLQAPKESRAERLQKADYFAMELLDGYLFLLLDMG
SGAIKMRASSKKVNDGEWCHVDFQRDGRKGSISVNSRSTPFLAGGDSEILDLDSEMYLGG
LPESRAELILPPEVWTAFLNYGYVGCVRDLFIDGKSRDVRGLAEVQSVRGVSSFCSRETH
KQCGANPCHNTGHCREGWNRYICDCVGTGYLGKNCEREATVLSYDGSMYLKIMMPLVMHT
EAEDVSLRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPET
LFAGQKLNDNEWHAVRVVRRGKSLQLSVDNVTVEGQMAGAHTRLEFHNIETGIMTERRFI
SVVPSNFIGHLQSLSFNALPYLDLCKNGDISYCELNARFGMRSIIADPVTFRSKGSYLAL
ATLQAYASMHLFFQFKTTATDGLLLFNSGDGSDFIVVELVKGYIHYVFDLGNGPSLMKGN
SDKPLNDNQWHNVVVSRDASNVHTLKIDSRIVTQHSNGARNLDLKGELYIGGVSKGMYNK
LPKLIASRDGFQGCLASMDLNGRLPDLIADALHRVGQVERGCEGPSTTCTEDSCANQGVC
LQQWDGYTCDCSMTSYGGPVCNDPGTTYIFGKGGALITYTWPPNDRPSTRADRLAVGFST
QLKDAILVRVESASGLGDYLQLHIEEGRIGVIFNVGTDDITIDENAVAVNDGKYHVVRFT
RSGGNATLQVDNQPVIERYPSGNFDSERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNS
QAAINIGGQERGRPFQGQISGLYYNGLQVLKLAAEGDPNVRAEGNLRLVGEVPSVLTTDT
TSTTPLADMSTTIMETTTTMATTTTRRQRSPTMRDSIAQVSRDSLDQNTDDLLVASAECP
SDDEDLEECEPGTGGELVLPIITEDSLDPPSIATRYPVIPAPPTYRPFLTLLETTKESLT
LPSANQRPPCPLDQEDNDCEDAIEVSGYGSGEVFDSSLPPTDDEDFYKTFPLVTDRTLLP
PPAVNGGAEGKISRDRHFSKPNSKSSTATTSNSPPENQGPAQGASPDLLLRKTKNSIPAG
KMNTRDQVLLLPMPTSYDLDHNGRHRHQPDITYPPNFHNLPTANPTGPGERGPPGAVEVI
RESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGAVV
KEKQPGVAKTTGKNKKDKDKEYYV
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggccacattttttccatctaaggtcctgtcccgtttgggtatcttcatggcctttttg
gtgtttgggggagcaatggcgctagaattcgggggtgccccaggacagtgggctaggtac
gcccgttgggaagcgggttcaatgggagaactcagtttcagcatcaaaacaaatgcttcc
aaagccctggtgctgtatcttgacgacggagggaactgtgatttcttggagcttctcatc
tcggatggccgtttgcagctacgcttcgccatctcctgcgcggagcccgctaccgttcac
ttagacacgccggtcagcgatgaccgctggcacatggtcctgctcacccggaactaccgc
gagaccatgctggtagtggacagcgaggctaaggtgtccgaagtgaagtccaagcggcgg
gacatgtctgtggtcagtgatctgtttgtcggaggcattcctccggatgtcaggctctca
gctctcacctccagcactgtcaaatacgagccccccttccgaggcctgatcgccaacctg
aaagtgggcgagactccccccaacttgctcagcagccagggaatccagagtgacttggag
tatctgtgtaccaagcagaacccctgcctcaatggggggctctgctccatacaccatggg
gaagttcgttgtgactgcagtcttaccaggtaccaggggaagttctgcaatgaagaagag
cattctgtggaaggtctggcgcacctgatgttaaacagccaaggagacacatcacaggct
gggaaagaagaatcggtggcgaccttcaagggcaacgagtttttctgctacgacttgtcc
cacaaccccatccagagcagcacggacgagatcacgctgtcgttccgcacgctgcagcgc
aacggcctcatgctgcacacgggcaagtcggccgactacgtcaacctgtccctgaagagt
ggagcggtgtggctggtcatcaacctgggatccggggccttcgaagcgctggtggaaccg
gtgaacggcaagttcaacgacaacaactggcacgatgtgcgagtgacgaggaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatctctgttgacgggatactgacgacc
acagggtacactcaggaggattacaccatgcttggctcggacgatttcttttacattggg
gggagtcccaacacagctgacctccctggatctccagttagtaataacttcatgggctgt
ctcaaagacgtggtctacaagaacaacgactttaaactagagctgtcccgactcgcgaag
gaaggggaccccaaaatgaaggtcgagggggatctggtgttccgctgcgagaacgtggcg
gcccttgaccccgtgaccttcgagagccccgaagcgtacatcgccctgcccaagtggaac
accaagaagacgggctccatctccttcgatttcaggaccacggagcccagcggtctcctg
ctgttcagccacggcaggctgcaggcccccaaagaaagccgtgccgagcgtttgcagaag
gcggattacttcgcaatggagttgctggacggctacctgttcctgctgttggacatgggc
tcaggggctatcaagatgagagccagcagtaagaaggtgaatgatggggagtggtgccat
gtggacttccaaagagacggacgcaaaggctccatttcggtgaacagccgtagcacccca
ttcctggcggggggggacagtgagatcctcgacttggacagtgagatgtacctggggggt
ctcccggagagccgagcggagctcatcctgcccccagaggtgtggactgccttcctcaac
tacggctacgtgggctgtgtgcgggacctcttcatcgacgggaagagccgggacgtgcgc
ggcctggctgaggtgcagagcgtgcgcggggtcagcagcttctgctctcgcgagacgcac
aagcagtgcggagccaacccctgccacaacacgggccactgcagggagggatggaaccgc
tacatctgtgactgtgtggggaccggctacctggggaagaactgcgagagagaagctaca
gtgctgagttatgatgggagcatgtatctcaaaatcatgatgccactggtgatgcacaca
gaagcagaggacgtctccctgcgcttcatgtcccagagagcctatgggctgctcatggct
accacttccaaggaatcggctgacacccttcgcctggagctggacggtgggagggtcaag
ctgaccgtcaacctagactgtatcaggatagactgtaacctcagtaaaggccctgagact
ctgtttgcaggacagaagctgaacgacaatgagtggcatgctgtgagagtggtgcgcagg
gggaagagcctgcagctctcagtggataacgtcacggtggaagggcaaatggcgggtgcc
cacactcgtctagagttccacaacattgagactggcatcatgaccgagcggcgattcatc
tccgtggtgccctccaactttatcgggcacctacaaagcctctccttcaatgctctgccc
tatctagacctgtgcaagaacggagacatcagctactgtgagctgaatgccaggttcggc
atgcgcagtatcatagcagatccggtcaccttccggtctaaagggagctacctagctctg
gctactttgcaggcttatgcctctatgcaccttttcttccagttcaaaaccaccgccacg
gatgggctgctgctgttcaacagtggagatggcagcgatttcattgtggtggagcttgtt
aaggggtatatccactatgtctttgacctgggtaacggcccttctttaatgaaggggaat
tcggacaagcccctcaatgataaccagtggcacaacgtggtggtgtcccgggacgctagc
aatgtgcacacactcaaaatcgactcccgcatcgtcacccagcactccaatggagcacgc
aacctggacctgaaaggagagctgtacattggtggtgtcagtaaggggatgtacaacaaa
ctaccgaaactgatcgcgtcccgggacggcttccagggatgcctggcgtcgatggacctc
aacgggagactccccgacctcattgcagatgccctccatcgcgtggggcaggtcgagcgg
ggctgtgagggtcccagcaccacttgcactgaggattcatgtgccaaccaaggggtgtgt
ctgcagcagtgggacgggtacacatgtgactgcagtatgacatcatacgggggaccggtc
tgcaatgaccccggtaccacctacattttcgggaaaggaggtgccctcattacctacacc
tggcctcctaatgaccggcccagcacgcgagcagaccgcctggctgtggggttcagcacg
cagctcaaagatgccatcctggttcgggtggagagtgcatctggactgggagactacctg
cagcttcacatagaagagggaaggatcggagtgattttcaacgtgggcacggatgacatc
accatcgacgagaacgcagtcgcggtgaacgacggcaaataccacgtggtgcggttcacg
cgaagcggaggcaatgccacgctacaggtggacaaccagccagtcattgagagataccca
tctggaaactttgatagcgagcggctggctattgctagacaaagaattccatacagactt
ggtcgggtagttgatgaatggctactcgacaaaggacggcagctgaccatctttaacagc
caggctgcgattaacattgggggtcaggaaaggggtcgccccttccaaggtcagatctcg
gggctctactacaatggcctgcaggtcctcaagctggcagcggagggggaccccaatgtg
cgggccgaggggaacctgcggctggttggggaggtgccctcggtcctgaccaccgacacc
acgtccaccaccccgctggctgacatgtccaccacaatcatggagaccacaacgaccatg
gccacgaccaccaccaggaggcagcgttcacctaccatgagggacagcatcgctcaggtg
agcagggatagtctggatcagaataccgatgatctgcttgttgcttcggcagaatgcccc
agcgacgatgaagatttagaggagtgtgagcctggaactggaggtgaattagtgttgccc
ataattacagaagattccctagaccccccttcaatcgccacccgctaccccgtcatcccc
gctccccctacttaccgtccattcctaaccctcctcgagaccaccaaagaatccctcacc
ctcccctccgccaaccagcgccccccctgcccccttgaccaggaagataacgattgcgag
gatgccatcgaagtctcgggctacggctctggggaggtctttgactccagtttgcccccg
accgacgatgaggatttttacaaaacttttcccttggtcacagacaggaccttgttacct
ccgccggcagtcaacgggggggccgaaggcaaaatctcccgggaccgccacttttccaag
cccaattccaagtcctccaccgccaccacttccaactcccctcccgaaaaccagggccct
gcacagggggccagccccgaccttctcctgcgtaaaactaaaaacagcatccccgccggc
aaaatgaacacccgcgatcaagtcctcttgctccccatgcccacttcctatgaccttgat
cataacggtagacacagacaccagcccgatataacctatccccccaatttccacaatctg
cctacagccaatcccacgggccccggagaaaggggtcccccaggagccgtggaggtgatc
cgggaatccagcagcaccaccgggatggtggtgggaatagtggccgcagcggcgctctgc
atcctcatcctcctctacgccatgtataagtaccgcaaccgcgacgaaggctcttaccag
gtggaccaaagccgcaattacatcagcaactcggcgacacaaagcaacggtgccgtggtg
aaggagaagcagcccggcgttgccaagacaacgggaaagaacaagaaggacaaagataaa
gagtattacgtctga
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