Acipenser ruthenus (sterlet): 117962509
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Entry
117962509 CDS
T07327
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117962509
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117962509
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117962509
NCBI-ProteinID:
XP_034767835
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Position
39:complement(3160031..3212489)
Genome browser
AA seq
1463 aa
AA seq
DB search
MLLVSTHPVMDGENYLHPEGPLLDSPMFSLSNPSLLPTAMENHMSPSSSWATFSSHQATY
NLHYPMQSGNQQYFNTTSEMPMETFSPHHFQDGDLNLTSHVRNGDFSQDLSYFEELSNNS
LFSSPTDSLSEYADNQGFLNSDSLNQVPTIWDVSTPSQPPELNPSRFQGINSLEELSAII
NAPPLGGYQIPPQPIVEEEEEVDNEEAEEMGHAETYADYKPSKSTIGNSHPDIVVETSTL
SSVPPPNITYTVSIPDSTINNGLLSALQLEAIIYSCQQHEVILQNGQRAGFLVGDGAGVG
KGRTVAGIILENYLNGRKKALWFSVSNDLKYDAERDLKDIDAPNIPVHALNKIKYGDTAT
SEGVLFATYSALIGESQAGGQHRTRLKQILDWCGERFDGVIVFDECHKAKNATSTKMGKA
VLDLQNKLPLARVVYASATGASEPKNMIYMSRLGIWGDGTPFRTFEDFLHTIEKRGVGAM
EIVAMDMKVSGMYIARQLSFAGVSFRVEEISLDKEYMLVYNKAARLWAEALAVFQRAADL
LGLESRKSLWGQFWSAHQRFFKYLCIAAKVRRLVELANKELADGKCIVIGLQSTGEARTR
EVLDENDGRLNRFVSAAEGVFQSLVQKHFPTEKRKREKGPANKRKRKPKGRQTKFLKHCT
EIGGVINISDDSSTESDVMDSDSNSSPDSLHDNDDVIFVDHINCYAAKLQEMKQDLLNKI
AVLGQELPLNTLDALIDKLGGPEGVAEMTGRKGRVVRMPDGSVRYESRAEQGLSIDHVNI
KEKERFMSGEKFVAIISEAASSGISLQADRRIKNQRRRVHMTLELPWSADRAIQQFGRTH
RSNQINAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYG
TRALDKIIKAIMGQIESKVPTPKGYPGGDAMFFRDMKRGLMDVGIFCREPRFGVGVEKDC
SITKFLNRILGLEVYKQNSLFQYFTDNFDYLIEKDKKEGKYDLGILDLAPGNDEIYEETQ
EKFLTPGNPQDGQVVLYKITVDRGMKWEEALSKFEKLTGPDDGFYLSYKLRGTYPNALLA
EQGRGKNFNLYKANIGKQVQHESLDNLFKRYRKVSPEEAKDAWESQYSFSRRKCSHATWN
GECKLIREGKECWQGMRLRQYYMLCGALLRVWKKVADAVSDITSSSILQIVRLKTKQHTK
QVGIKIPESCIARVREELTQMNEALRRKIEERQEKARREERELLEKDFLEKLYAANASVS
DSRATSTQPLDLSLTQPMVLHNHYSHSLDVLDLTISPIPLQDSSAGLGLEPTKGSGSSSS
GSTAPQGEFSLESLITQPQQQQLQSSQVGLPSLITQNFPGFSLDSTLGLPQSYQLPSQLA
ITDSAAAPAAAPGSASSSASLSLSSSSQQLQPGFLQTPQLSNGQSELDAINFREVLDNMF
RTTQENQRQSVIQYGLMPFWDDD
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgctcttggtctctacacatcctgtcatggacggggagaattacctgcacccagaggga
cccctactagacagcccgatgttcagcctgtcaaacccttcacttctccccacagcaatg
gagaaccatatgtctccatctagttcgtgggccacgttctcctcacatcaggctacatat
aacttgcactaccctatgcaatctggaaaccagcaatattttaataccacttcagagatg
cccatggaaacgttcagtccgcaccatttccaagacggggatttaaacctcaccagccat
gtgagaaatggagacttttctcaggacctttcgtacttcgaggaattatccaacaactcc
ctgttctcttcacccaccgactccctgtctgagtacgccgataaccaaggcttcctcaac
tcagacagcctgaaccaagtgccaacgatatgggacgtgagcacgccgtcgcagccccca
gagctgaaccccagcaggtttcaaggtataaacagtttggaagaactctctgccatcatc
aacgctcctcctctcggaggctaccagatacccccccagccgatagtggaggaggaagag
gaggttgacaatgaagaggcagaggaaatgggacacgcagagacctacgcagactacaaa
ccatccaaatctacgataggaaactctcacccagatatcgtggttgaaacaagcacatta
tccagtgtaccccctccgaatattacatatactgtctccatccctgacagtacaataaac
aacgggctactgtctgcactgcagctggaggctatcatatattcatgccagcaacatgag
gtgattttgcagaatgggcagagagcaggctttctggtgggggatggagccggcgtgggc
aagggcaggaccgtggcaggcattattctcgaaaattacttaaacggaagaaagaaagca
ctgtggttcagtgtctccaatgatctaaagtacgacgcagagcgagatctcaaagatatt
gatgctccaaatatccctgtgcatgccttaaacaagattaaatacggtgacacagctacc
tcagaaggagtgctgtttgcgacatactctgcactgattggagagagccaggcagggggg
cagcacagaacaagactaaaacagatcctggactggtgtggggagcgatttgacggagtc
attgtgtttgacgagtgtcataaagccaaaaacgccacgtcgacgaaaatgggcaaggct
gttctggaccttcaaaacaagcttcctttagcaagggtggtctatgccagtgccacaggt
gcctctgagccaaagaacatgatctacatgagtcgactggggatctggggggatggcacc
cccttcaggacgttcgaggacttccttcacaccattgaaaaaaggggtgtgggtgcgatg
gagatcgtagccatggatatgaaagtgagcgggatgtacatcgcccggcagctcagcttc
gctggcgtctccttccgggtagaggagatcagcctggacaaagaatacatgttggtctac
aacaaagcagcacgtctgtgggctgaagccctggctgtgttccagcgagctgctgacctg
ctggggttggaatcgcggaagtccctgtggggccagttctggtcggcacaccagcgattc
tttaaatacctctgcatagcagccaaggtgcgccgcctggtggagctggcaaacaaggag
ctggctgacggcaagtgcatcgtgatcggtctgcagtccactggggaagctcgaacccgc
gaggtcctggatgaaaatgacgggcgcctgaaccgattcgtgtctgcggcagagggagtg
tttcagtcgctggtacagaagcattttccaactgagaaaaggaaaagggagaaggggccg
gcaaataaaaggaaacgtaaacccaaggggcggcagacgaagttcctgaagcactgcact
gagattgggggtgtgatcaacatcagcgatgacagcagcacggagtctgacgtcatggac
agtgactctaactcctcccccgactccctccacgacaacgatgatgtcatttttgtcgac
cacattaactgttatgctgcaaaactacaagaaatgaagcaagaccttctgaataagatt
gcagtgctgggacaagaactacctctgaataccctggatgcgttgatagacaagttaggc
ggacccgaaggtgtggcggagatgaccgggcggaagggccgtgtggtgcggatgccagac
ggcagcgtgcgctacgagtctcgagcagagcagggcctgtccatcgaccacgtgaatatc
aaggagaaggagcgcttcatgtcaggagagaaatttgtagcaataatctcggaagcagcc
agctctgggatctcattacaggctgacaggcgaataaagaatcaaaggcggagggtccac
atgaccctggagctgccctggagcgcagaccgagccattcagcagttcggtcggactcac
cgctccaatcagatcaatgcccccgagtatatctttctgatctccgagctggcgggggag
aggagatttgcgtccatcgtcgccaagcggctggaaagtctgggtgccttaacccacgga
gacagaagggcgacggagtcgcgagacctgagcaagtacaactttgaaaacaagtatggt
accagggctttggataagattattaaagccattatggggcagattgagagcaaggtgccg
actcctaaaggttatcccggtggagacgccatgttctttagagacatgaagcgtggactg
atggacgtgggaattttctgcagagaaccccgatttggagtcggcgtcgagaaagactgt
agcatcacaaagttcctgaaccgcatccttggcctggaagtttacaagcagaactccctc
tttcagtacttcactgacaactttgactacctgatcgagaaggacaagaaggagggcaaa
tacgacctgggaatcctggacttggctccaggaaatgatgagatctacgaggaaacccag
gaaaagttcctcactccaggaaaccctcaggacgggcaggtggtgctctataagatcacc
gtggatcgaggcatgaagtgggaagaagccttgagcaaattcgaaaagctgaccggacct
gatgatggcttctatctctcatacaagttgaggggaacttaccccaacgcgctcctggca
gaacaaggccgggggaaaaacttcaacctgtacaaagcgaacatcgggaagcaggtccag
catgagagcttggacaacctcttcaagaggtaccgcaaggtgagcccagaagaagccaaa
gatgcctgggaaagtcagtacagtttctcccgccggaagtgcagccacgccacttggaac
ggggagtgcaagctgatccgagaggggaaggagtgctggcagggcatgcggctgcggcag
tactacatgttgtgcggggcgctgctgcgcgtctggaagaaagtggccgacgcggtttct
gacatcaccagctccagcatcctgcagatcgtccgactgaagaccaagcagcacaccaag
caagtcggtatcaagatcccggagagctgcatcgcccgtgtgcgggaagagctgactcag
atgaacgaggcgttgaggaggaaaatcgaggagcgccaggagaaggcccgtcgggaggag
agggagctgctggagaaggacttcctggagaaactctacgctgctaacgccagcgtctcc
gactcccgcgccacctccacccagcccctcgacctctccctaacccagcccatggtcctc
cacaaccactacagccacagtctggacgtcctggacctcaccatcagccccatccctctt
caggacagcagtgcggggctggggctcgaacccaccaagggcagcggctcctccagctcc
ggaagcaccgccccgcagggagagttcagcctggagtctctcatcacgcagccccagcag
cagcagttgcagtcaagccaagtcggcctcccgtctttgatcacgcaaaactttccaggc
ttctctcttgattccaccctgggcctccctcagtcttaccaactacccagccagctggct
atcactgacagtgctgctgcccccgctgctgcccctggttctgcttcttcctctgcttca
ttgtcattatcatcatcttcacagcagctgcagccaggcttcttacagactccccaactg
tccaacgggcaaagcgaattggacgccatcaacttccgcgaggttttagataatatgttt
cggaccacccaggaaaaccagcgtcagtctgtcattcagtacgggttgatgcctttctgg
gatgacgattaa
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integrated database retrieval system
