Acipenser ruthenus (sterlet): 117962612
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Entry
117962612 CDS
T07327
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117962612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117962612
Membrane trafficking [BR:
arut04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117962612
Endosome - Golgi transport
Arf GTPase associated proteins
117962612
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117962612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
PH_11
SAM_1
PH_3
SOS1_NGEF_PH
PH_8
PH_13
PH_6
SAM_2
PH_9
OrsD
Motif
Other DBs
NCBI-GeneID:
117962612
NCBI-ProteinID:
XP_034779088
LinkDB
All DBs
Position
9:complement(50560269..50624045)
Genome browser
AA seq
1501 aa
AA seq
DB search
MSSEESSLPVSEWLTVLRLNQYISSFERFGYELVSDCRGVTNEELHHAGVVLPGHQKRIL
ASLDKIFSEEPQNQKPIPKKRNIFLSPPPRNDSQDALPMDGDMMEAGSPKTNDSVIHDKA
PPPIPPRVTPNRPPVKFTPAVAPGHLRCPNTLPLEATTSEQQLLKKCTPSPVSEEFHLYE
QCSSDQTSKVVPPLPAKRYVVGAKETRAPPPLPKRPPVAPPRTVPSSNSPSLSNLSPVND
PEEGEKVPVVPPRTKLSYQPFSLPDLPQRKSPKLSKTKSSSTDSSEGYEYFDQIDDNLFD
PVEMSEKEDFLTVEKGKRLNSLYSDDEHLDEDNDSYEAISNNGKSWQDYGQSMLQQRVST
RSVVSLNIGAKGDVSTVPQLSPVIKHGWLCKNPPQGSYIYQKRWVKLDAEYLRYFDSDKD
MYSKRIIPTASITSVANVGDQKFEVVTNNRTFVFKAESDSDRNEWVKVLQETVRDHNVTN
RVSLLQQSSAASEEKQGALELRGLRSKLYVVVSGDKVFLYKNNEDYQLGIGITSIEMNLG
NVKDADRRAFDLTTPYRTFSFVADSDKQKEEWMEAMQNSIGEALSNYEVAEKIWKEESNC
FCADCGAAQPEWAAINLCVVFCKRCAGEHRGLGPSISKVRSLKMDKKVWTEELVELFQVL
GNRRSNAFWAANVPPSEALSPASTSEERRRFISAKYREGKYRRYHPLFGNQEALDKALCI
NMQSSDVGETLSLVFCGANVNCDTGDPDCPSPISLAKSFDQKLQVEFLAQNKNTEIPRSE
VGGHLDRQYYVAPPSITHNGFLFKTGSMGKPVTERKAKEEFSQRWCTLNDGVFSYFESPR
NSTPNGDLRMKEIACLAVGVPETHGYDHTFEIYTDSERLYLFGTDNSDAMREWVKSIAKS
FIPSSAEDLLNRDFERIGRLQYKDGLNLQSPKVGWFALVGSTLHVCFEDSEEEEAIHLKK
LQELSIQQENEVLVLVERRRTLYIQGERKLDFQGWSSSIQRAAGSSGHTLCEQQLTEADI
PVIVDRSIDYITQCGLTSEGIYRKSGVNSKIAALLESFRRDARNVRLKEGDHQVDDVSNV
LKRFFRDTEEGMFTSQAANDWLSTPAMADDCQRVLHYQALLNNLPRVNKATLRALVNHLY
CVQCFSDINQMNLHNLAIVFGPTLFQTDGKDYNAGRVVEDLISHYVAIFNVNEQQLKKQL
DEISAIIKLRDLNSSSKVPPAGDFICTVYLEEKKETAEQHIKIPATMTAAELAFEILDRR
KITVREKDYWCCFEVNEKEETERSLHYQEKVLPILHSLGTESYLVVKKHFSMEAMLIYLA
SKVDDSKHGMIKFREDRHLLGLGLSAFHDRYFILNRTSLRLYKEVRSLQKLQRAEQQCSH
RPEKEWPVKSLKIYQGIKKKLRPPTCWGLTVVYANEKHEKQQRYLCCDTQTEMREWLSTF
LSIQHDGNVWPSDSMKVCASRVPLDARLGNISLIPLRGSENEMRNSVAAFAADPLALFGK
V
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgaggagtcctccctcccggtctctgagtggctcacagtgctgcgtctgaac
cagtacatcagttcctttgagaggttcggctatgagctcgtctcggactgccggggggtt
accaacgaggaacttcaccatgcaggagtggtcctcccaggtcaccaaaagcgaatcctg
gctagccttgacaagatcttttcagaagaaccacaaaaccagaagccaatccccaaaaag
aggaacatatttctcagcccaccgcccagaaacgactcccaggatgctttgccaatggat
ggtgacatgatggaggctggcagccccaaaactaatgactctgtcatccatgacaaggct
ccccctcccattccacctagggtgacacccaatcggccacctgtcaaattcactcctgct
gtagctcctggacatctccgatgccccaatacactgcccttggaggccacaacttcagaa
cagcaactcctgaagaaatgcacgccctccccagtttctgaggagtttcatctttatgag
cagtgttcctctgaccagacgagcaaagttgtgccaccgcttccagcaaaacgttatgtc
gtgggtgcaaaagagactcgggctccgccgccactgccaaagcgtccaccagtggctcca
ccaagaactgtgccgtccagtaattccccttcactaagcaatctgtctccagttaatgat
ccagaggagggtgagaaggtcccggtggttcccccaaggaccaaactgtcttatcagcca
ttcagcctacctgacctaccccagagaaaatctcctaaactctcaaagaccaaatcttct
tcaacggacagctcagagggctatgaatattttgatcagattgacgacaatctgtttgac
cccgtagagatgtcggaaaaggaagatttcctgacggtagaaaaggggaagcgattgaac
agcctctacagcgatgacgagcatctggacgaagataacgatagctatgaagccatatca
aataatggaaagtcctggcaggactatggtcagagtatgctccagcagagagtctctact
cgctcagtggtcagcctgaatataggagcgaaaggagatgtcagcacagtgcctcagctc
tcgcctgttattaaacatggctggctgtgcaagaatcctccacagggctcgtatatctac
cagaaacgatgggtgaagcttgatgcagagtacttgagatattttgacagtgataaggac
atgtattcaaagcgaatcatcccaacggcttctattactagtgttgctaatgtgggggac
cagaagtttgaggtggtcacgaacaataggacgtttgtcttcaaagccgagagtgactct
gatcgtaatgagtgggtaaaggttttgcaagagactgtccgagaccacaatgtgacgaac
cgggtgtccttgttacagcagtccagcgcagccagcgaggagaagcaaggcgccctggaa
ctaaggggcctgcgctccaaactctacgtggtggtgtcaggggataaagtctttctctat
aagaataatgaggattaccagctagggatcggcatcacttccatagagatgaacctggga
aatgtgaaggatgcagatcgcagggccttcgacctcaccaccccctacaggaccttcagt
tttgtggcagattcagacaagcagaaggaggagtggatggaggccatgcagaactccatc
ggagaggctctgtccaactatgaggtggctgagaagatctggaaagaggagtccaattgc
ttctgtgccgactgtggggccgcgcaacctgaatgggctgccatcaacctctgtgtggtg
ttctgtaagcgttgtgcaggtgagcacagaggtcttgggccaagcatctcaaaagtacgg
agtctgaagatggacaaaaaagtttggactgaggagcttgttgagttgtttcaggtgctg
ggtaatcggcggagcaatgcattctgggcagcgaacgtgcccccgagtgaggcgctgtca
ccagcaagcaccagtgaagagaggcggagatttatcagtgccaaataccgggaggggaag
taccggcgttatcatccactgtttgggaaccaggaggctctggacaaggctctgtgcatc
aatatgcagtcaagcgatgttggtgagacgctctccctagtgttttgtggggcaaatgtg
aactgtgacacaggagacccggactgcccctcccccatctccctggccaagagctttgat
caaaagctgcaggtggagttcctggcccagaacaaaaacacagagatcccgaggtcagag
gtgggaggtcacctggaccggcaatactatgtggctccaccctcaatcactcacaatgga
tttctgttcaagacagggtcaatgggaaagccagttacagaacggaaagctaaagaagag
ttcagccagcgttggtgcaccttgaatgatggggttttcagttacttcgagagccctcgg
aattccacccccaatggggatctccgaatgaaagagattgcatgtcttgctgtcggtgtt
ccagaaacacatggttacgatcacacatttgagatttacacagactcggaacgcctctat
ctgtttggaacagacaactcggatgctatgagagagtgggtgaaatccattgccaagtcg
tttatcccatccagtgcggaagacttgctgaatcgggattttgagcggatcgggcggctg
cagtacaaagacgggttgaacctccagagccccaaggtgggctggtttgcattggtgggc
tccactctgcatgtctgcttcgaggacagtgaagaggaagaagctatccatctgaagaag
ctgcaggagctctcgattcagcaagaaaatgaagtgctggttttggtggagagaaggagg
accctgtatatccaaggggaacggaagctagatttccagggctggtccagctccatacag
agggcagccgggagctcgggacatacactatgcgagcaacagctaacagaggctgacatc
cccgtgatagtggacaggtcaatcgactacatcacgcagtgtggcctgacctcggagggg
atctaccggaagagtggagtgaactccaagattgcggcgctgctggagagtttccgacgg
gatgcgcggaacgtgcgcctgaaggagggcgatcaccaggtggatgacgtctccaacgtc
ctcaagaggttcttccgagacacagaggagggcatgttcaccagccaggctgcaaacgat
tggctcagcacgccagctatggcagacgattgccagcgggtccttcattaccaggcactg
ctcaacaacctgccaagagtcaacaaggccactctgagagcccttgtcaatcatctctac
tgtgtccagtgcttttcagacataaaccagatgaacctccacaatctggccatcgtattc
ggtcccacactcttccagacagacggcaaggactacaatgcagggagagtcgtcgaggac
ctcatcagccactatgtggccatttttaatgtcaatgagcaacagctcaagaaacaactg
gatgaaatctcagccatcatcaaattacgggacctcaactccagcagtaaagtgcctcct
gctggtgatttcatatgcacagtttaccttgaagaaaaaaaggagacagctgagcagcac
ataaagatcccagccaccatgacggcagcagaactagcttttgagatccttgaccgcagg
aaaatcactgtccgagagaaggattactggtgctgcttcgaggtgaacgagaaggaggag
acagagcgttctctgcactaccaggagaaggtgttgcccattctgcactctctgggcact
gaaagctacctagtggtgaagaaacatttctctatggaagccatgctcatctacctagca
agcaaagtggatgactcaaagcatggcatgataaagttccgtgaggacagacatttgctt
ggccttggcttgagtgctttccatgatcggtacttcatattgaacagaacatcactacga
ctctataaggaagtgcggagtcttcaaaaactgcaaagggcagagcagcagtgcagtcac
agaccagagaaagagtggcccgtcaaatctctcaagatataccagggaatcaaaaagaaa
ctgcgaccaccaacctgttggggtcttacagttgtatatgcaaatgagaaacacgaaaaa
cagcaaaggtacctgtgctgtgacacccagacagagatgagggagtggctttccaccttt
ctaagtatacagcacgacgggaatgtgtggccctcagactcgatgaaggtgtgtgcgtcc
cgggttcctctggacgccaggttgggtaacatctctctgatcccgttgaggggcagtgag
aatgagatgagaaacagcgtggctgcttttgctgctgatccgcttgctctctttgggaaa
gtctga
DBGET
integrated database retrieval system
