Acipenser ruthenus (sterlet): 117963186
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Entry
117963186 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117963186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117963186
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117963186
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117963186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
WWE_5
zf-rbx1
zf-RING_11
zf-RING_2
zf-RING_5
zf-RING_Vps41
PHD_NSD
zf_RING_Vps8_fungal
zf-UDP
zf-RING_16
zf-ANAPC11
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
117963186
NCBI-ProteinID:
XP_034758115
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All DBs
Position
19:21192465..21249094
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AA seq
622 aa
AA seq
DB search
MMLRPGSAMMIHVNGLGYAPQNLARVVVWEWLNEHGRWRPYSAAVCHHIENVLKGDSRGT
VVLGQVEPQLAPYIIDLQSMHQFRQDTGTMRPAQRNFYEPSSAPGKGVVWEWENDSGSWT
PYDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMTQTNRQSQRKRRLRRRMDLAYPL
TTGSIPKSQSWPVGTSSGQPCSCQQCILVNSTRAASNAILASQRRKVYTGANGAPGTLTL
VRQSNTFAGTTLWSPTSSVSSGSAKPEQVQSPATGTTYPRVPALPAPTPASGQNNLNRPG
PQRSALVSTRGSIPPGVPALPVKNLTGSGPVHPALAGMTGILMCAAGLPVCLTRAPKPIL
HPPPINKSDMKPVPGVNGTCRKTKKKHLKKGKNPEDVVKRYMEKVKMVPDEDCTICMERL
TTSSGYEGVLSHKGIKSDLVGKLSKCGHIYHLLCLVAMYNNGNKDGSLQCPTCKAIYGEK
TGTQPPGKMEFHVIPHCLPGYPEFKTIRIVYDIPAGIQGTEHPNPGKKFSARGFPRHCYL
PDLEKGRKVLKLLIVAWDRRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGYPDP
KYLSNVLAELSAQGVTEEGLKD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcgtcctggctctgcaatgatgatccacgtgaacggactggggtatgcaccc
cagaacctggcccgggtggtggtgtgggaatggctgaacgaacacggtcggtggaggccc
tacagtgctgctgtgtgccaccacattgagaacgtgttgaagggggactcgcggggcacg
gtggtgctgggccaggtggagccacagttggccccttacatcatagacctgcaatcaatg
caccagtttcgacaggacacaggcaccatgcggcccgcgcagcgtaacttctacgagccc
tcctcggccccggggaagggggtggtgtgggagtgggagaacgacagcggctcctggacc
ccctatgacatggagatctgtgtgactatccagaatgcctatgagaagcagcacccctgg
ctggacctcacctcgctgggcttctgctacctcatcgacttcaacagcatgacccagacc
aaccggcagagccagcgcaagaggaggctacgccgcaggatggacctggcctacccgctc
accacgggctccatccccaagtcccagtcctggcctgtcggcaccagctccggccagccc
tgctcctgccagcagtgcatcctggtcaacagcacccgggccgcttccaacgccattctg
gcctcccagcgccgcaaagtctacaccggggccaacggggcccccgggaccctcactctg
gtcagacagagcaacacctttgccggcaccaccctctggtcccccacttcttcggtcagc
agcggctcagccaagccagagcaggtccagtccccagctacgggaaccacctaccccagg
gtccctgctctccctgcccccacccccgcctctgggcagaacaacctgaaccgaccgggc
ccccagcgctctgccttggtgagcacgagaggatccatcccaccaggggtccctgcactt
cctgtgaagaacctcactggctctggcccagttcacccagcactggcaggcatgaccggg
atcctgatgtgtgcggcgggcctccctgtgtgtctgaccagggctcccaaacccatcctg
caccccccgcccatcaacaagagcgacatgaagcccgtcccgggggtgaacggcacctgc
cgcaaaaccaagaagaagcacctgaagaaagggaagaacccagaggatgtggtgaagagg
tacatggaaaaagtgaagatggttcccgatgaggactgcactatctgtatggagagactg
accacctcgtccggctacgagggggtgctcagccacaaagggatcaagtcggacctggtg
ggcaagctgagcaagtgtggccacatctaccacctgctgtgtctggtagccatgtacaac
aacggcaacaaggacggcagcctgcagtgccccacctgcaaggctatctatggtgaaaag
acaggcacacagccccctgggaagatggagtttcacgtcatcccccactgcctgcccgga
taccccgaattcaaaaccatccgcattgtctacgatatccctgccggcatccagggcacc
gagcacccaaatccagggaagaagttcagcgccagaggattcccccggcactgctacctg
ccagacttagaaaagggaaggaaggtcctaaagctgttgatagttgcctgggaccgtcgc
ttgatctttaccatcggcacgtccaacaccactggggagtcggacacggtggtctggaac
gagatccaccacaagacagaatttggctccaacttgacaggacacggctacccagatccc
aaatacctgagcaatgtcctggcagaactctccgctcagggagtgaccgaagaggggctg
aaagactga
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