Acipenser ruthenus (sterlet): 117963335
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Entry
117963335 CDS
T07327
Name
(RefSeq) TATA-binding protein-associated factor 2N-like isoform X1
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117963335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117963335
03019 Messenger RNA biogenesis [BR:
arut03019
]
117963335
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117963335
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117963335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
FMN_red
Motif
Other DBs
NCBI-GeneID:
117963335
NCBI-ProteinID:
XP_034758866
LinkDB
All DBs
Position
20:complement(28389327..28406505)
Genome browser
AA seq
425 aa
AA seq
DB search
MSSGSGYGQPGAPQQSYAAYGAPASQGYQQSTQGYGQAADASASYGQSYAGYGGNYAQAQ
PAESYGQTAQSCTSSYGSQAGYGQPPQPQAYGGYGQQSTEAPAGQGAKSQSAYGQQSDYS
QPPNHDNYGRRAPSGEENSRGSMSRYGRDEGSSGRSDGYRGRVRGGFDRDSRSPPSGMGG
GDRGGFKNFGGSRDLAQRSDSGGDQDNSDNNTIFVQGLGDSVNPEEVAEYFKQIGIIKIN
KKTGLPMINLYTDKATGRLKGEATVSFDDPPSAKAAIDWFDGKEFNGKPIKVSFATRRPE
FMQRGGARGGGGRGETCAFSGSRGFGRGSFGASPGGEPKNGDWLCPNSSCGNMNFARRTE
CNQCSTSKPGDAYGDRGGGRGGYGGDRGGFRGRGGFRGGRGGDRGGFGGKMGGRDDYRDR
RDRPY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgggttctggttacggtcagcctggagctccgcagcagagttatgcagcttat
ggtgcaccagcaagccaaggctaccagcagagtacacagggctatggccaagctgctgat
gcatcagcttcgtatggacaaagctatgcgggttatggcggaaactatgcacaggcacag
ccagctgaaagttatggtcagacagcacagagttgtacatcaagctatgggagtcaggct
ggttatggacaaccaccacaaccgcaagcttatggaggctacggacagcagagcacagag
gcaccagcagggcaaggagcaaagtcccagtctgcttatggtcagcagtcagattatagt
cagccgcctaaccacgacaactacggccgacgtgcgccctcaggtgaagagaacagtcga
ggcagtatgagtaggtatgggagagatgaagggagctctggcaggtcggacgggtacaga
ggtagagtgcgaggtggatttgaccgggacagcagaagcccaccttctggtatgggaggt
ggtgaccgtggtggcttcaaaaatttcggtggctcaagagatctggcacagcggtctgat
tcaggtggtgatcaggacaactctgacaacaacaccatctttgtccagggactgggggac
agcgtaaaccctgaagaggtggctgaatatttcaaacagatcggcatcattaagatcaac
aaaaaaacaggcctgcctatgatcaacttgtatactgacaaagcaaccgggaggcttaag
ggagaagccactgtgtcttttgatgatccaccatctgcaaaagcagctattgattggttt
gatggaaaggagttcaatggcaaaccaatcaaggtttcctttgccacaagaaggcctgaa
tttatgcagcgaggaggagcaagaggtggaggagggcgtggagagacatgtgctttttca
ggatccagaggttttggccgtgggagttttggtgccagccctggtggagagccgaagaac
ggagactggctgtgtccaaactcgtcttgtggtaatatgaactttgcaagaagaacagaa
tgcaaccagtgcagtacatctaaaccaggggatgcctatggggatcgtggtggtggtaga
ggaggctatggaggagacaggggcgggttcagggggcgtggtggattccgtggggggcgt
ggtggcgatcgtggaggctttggagggaagatgggaggaagggatgattacagagaccgc
cgagaccggccatactga
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