KEGG   Acipenser ruthenus (sterlet): 117963336
Entry
117963336         CDS       T07327                                 
Name
(RefSeq) syntaxin-1A-like isoform X1
  KO
K04560  syntaxin 1A
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    117963336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arut04131]
    117963336
Membrane trafficking [BR:arut04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    117963336
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 ATG17_like PspA_IM30 GNVR Ferritin Spectrin_Anc-1 Lzipper-MIP1 YtxH Lge1 DUF948 DUF848 DUF677 LMBR1 Laminin_II ApoL Nsp1_C
Other DBs
NCBI-GeneID: 117963336
NCBI-ProteinID: XP_034758886
LinkDB
Position
20:20717350..20825265
AA seq 288 aa
MKDRTAELRTVKDNEEDDEVTVAVDRDRFMDEFFEQVEEIRGFIEALYEKVEEVKRKHSA
ILAAPNPDEKTKQELEELMTDIKKLANKVRSKLKSIEQSIEHEEGLNRSSADLRIRKTQH
STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDSNITKQAMNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRKKIMIIVCCVVLGIIIASSVGGTLA
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggaccgcacagcagagctcaggactgtgaaggacaatgaagaggatgatgaggtc
actgtcgctgtggaccgtgaccgcttcatggacgagttcttcgagcaggtggaggagatc
cgcgggttcatcgaagcgctttacgagaaggtggaggaggtgaagaggaagcacagcgcc
attcttgcagcccccaatcctgacgaaaaaaccaagcaggagctggaggagctgatgact
gacatcaagaaactggctaacaaagtgcgctccaagttaaagagcattgagcagagcatc
gaacatgaggaagggctgaacagatcgtcggctgaccttcgaatacgaaagactcagcat
tccacgctgtctcgcaagtttgtggaagtgatgtcggagtacaacgccacccaatcagat
tacagggagcgctgcaaggggaggatccagcggcaactggagatcaccggcagaaacacg
accaatgaggagctggagagcatgctggagagcgataaccctgccatcttcacctccggg
atcatcatggactcgaacatcacaaagcaggcgatgaacgagatcgagacgcggcacacc
gagatcatcaagctggagaacagcatccgcgagctgcatgacatgtttgtggacatggcc
atgctggtggagagccagggggagatgatcgaccgcatcgagtataacgtggagcactcc
gtcgattacgtggagcgcgccgtctctgacacgaaaaaggctgttaagtaccagagcaaa
gcgcggcggaagaaaatcatgatcattgtgtgctgcgtagtgctggggatcataatcgcg
tccagtgttggggggacgttagcctaa

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