Acipenser ruthenus (sterlet): 117963336
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Entry
117963336 CDS
T07327
Name
(RefSeq) syntaxin-1A-like isoform X1
KO
K04560
syntaxin 1A
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117963336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117963336
Membrane trafficking [BR:
arut04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117963336
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
PspA_IM30
GNVR
Ferritin
Spectrin_Anc-1
Lzipper-MIP1
YtxH
Lge1
DUF948
DUF848
DUF677
LMBR1
Laminin_II
ApoL
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
117963336
NCBI-ProteinID:
XP_034758886
LinkDB
All DBs
Position
20:20717350..20825265
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AA seq
288 aa
AA seq
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MKDRTAELRTVKDNEEDDEVTVAVDRDRFMDEFFEQVEEIRGFIEALYEKVEEVKRKHSA
ILAAPNPDEKTKQELEELMTDIKKLANKVRSKLKSIEQSIEHEEGLNRSSADLRIRKTQH
STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDSNITKQAMNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRKKIMIIVCCVVLGIIIASSVGGTLA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcacagcagagctcaggactgtgaaggacaatgaagaggatgatgaggtc
actgtcgctgtggaccgtgaccgcttcatggacgagttcttcgagcaggtggaggagatc
cgcgggttcatcgaagcgctttacgagaaggtggaggaggtgaagaggaagcacagcgcc
attcttgcagcccccaatcctgacgaaaaaaccaagcaggagctggaggagctgatgact
gacatcaagaaactggctaacaaagtgcgctccaagttaaagagcattgagcagagcatc
gaacatgaggaagggctgaacagatcgtcggctgaccttcgaatacgaaagactcagcat
tccacgctgtctcgcaagtttgtggaagtgatgtcggagtacaacgccacccaatcagat
tacagggagcgctgcaaggggaggatccagcggcaactggagatcaccggcagaaacacg
accaatgaggagctggagagcatgctggagagcgataaccctgccatcttcacctccggg
atcatcatggactcgaacatcacaaagcaggcgatgaacgagatcgagacgcggcacacc
gagatcatcaagctggagaacagcatccgcgagctgcatgacatgtttgtggacatggcc
atgctggtggagagccagggggagatgatcgaccgcatcgagtataacgtggagcactcc
gtcgattacgtggagcgcgccgtctctgacacgaaaaaggctgttaagtaccagagcaaa
gcgcggcggaagaaaatcatgatcattgtgtgctgcgtagtgctggggatcataatcgcg
tccagtgttggggggacgttagcctaa
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