KEGG   Acipenser ruthenus (sterlet): 117963468
Entry
117963468         CDS       T07327                                 
Name
(RefSeq) protocadherin-20-like
  KO
K16498  protocadherin delta 1
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    117963468
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:arut01009]
    117963468
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:arut04515]
    117963468
Protein phosphatases and associated proteins [BR:arut01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117963468
Cell adhesion molecules [BR:arut04515]
 Cadherins
  Protocadherins
   117963468
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th He_PIG
Other DBs
NCBI-GeneID: 117963468
NCBI-ProteinID: XP_034759546
LinkDB
Position
21:20864180..20869835
AA seq 874 aa
MISGMDYRKHFKMDWARILQNCIGMLLLAHMVSSESVSEVTFSVKEEEDAGVSIGNIQQH
LIPLVSDGDTLTYKFLENNLYVTLDEITGFLYTTKHKLDREILCPPDHLGDCVLQLNAIV
MPDKYFKMIKVNIDIEDINDNAPYFLENNISLSISENTPVGTTIGIDHLALDKDTGTNSM
LTYLLENSDGFFSIALEGESLSVIIEKPLDRESLDVHQMKLIATDGGHPSLSGTAALNVQ
VEDANDNCPVFTSAEPILVTIPENAAADSIVAQVHATDADLGSNADIIYSYSPRVSAASR
ELFSLDPSSGIITFSGVVETETPPEHKLSVFANSAPCPPAIAVVIVYLSQDTNQQPVIDI
SYIASLDNDDVVLKENVPVNTAIALLDVIDPHNIKGSLNIEGDVPFILKPHHGKYLLLTS
KPLDFELDKQYNVFIVARDANQKSVFHKRLIRIRVNDVNDNAPRFSQRSVEASIEENNGL
DTPLIRLTAIDADSDQNGKVVYSLGPDAPPMFAINTSTGELTVSSVLDREQQDLYNFTVV
AADQGTPSLETVTTVLIRVLDQNDNRPLFITNEFTFFIPENFPRLGEVAIINVTDADTGP
NGKVMVSILNSTVPFVMDNARGTLRCSSDIDRETADIHEIWIMAIDSGNPALSTTAKVTI
FVLDINDNPPKVLLPKNNFSCLPVPGSTAQGATVAEIYAIDMDAGMNSVISYKIIGKEAP
GPSPFKIDSLTGNITLQEKLLTNHYGMHHLFIQVSDGGLPKPLQSTIWINLFVNETLSPC
VLNTVPEGFFQEQPLEMQNLCGREFSEILCLPLTFIVGLAMMTASLIFFAAGIYMFRKAT
VSNLRNMNRPAHEDAEIPLKLNQNYDTRDWVDVQ
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgatttcaggaatggattatagaaaacattttaaaatggactgggctagaatacttcag
aactgtattggcatgctcctgctggcccacatggtctccagtgagtcagtttctgaagtt
acattcagtgtcaaagaggaagaagatgccggtgtttctattgggaacattcagcagcat
ctcatccctctggtatccgatggagacacgttaacttacaagttcttggagaacaatcta
tacgtcaccctggatgagataactgggttcctgtacacaaccaaacacaaacttgacaga
gaaatcctgtgtccacccgaccacttgggtgactgtgtgctgcaattaaatgctattgtt
atgcctgataaatattttaaaatgattaaagtcaacatagacatagaagacattaatgac
aatgcaccctactttctggagaacaatatttccctgtcaatatccgagaacaccccagtg
ggaacgacaattggaattgaccatttggcccttgataaagacaccgggactaacagcatg
ctcacttacctgcttgaaaacagcgatgggtttttcagtatagcactagagggggagtca
ctttctgtcatcattgagaagccactggaccgggaatctctggatgttcaccaaatgaaa
ctcattgctactgatggagggcatccatctttatctggaactgctgccttgaatgtccag
gtagaagacgccaatgataactgtccagtgttcacttcagcagaacccatcctggtcact
attcctgaaaatgcagccgcagatagcatagtggcacaggttcacgcaactgatgcagat
ctcggctctaacgctgacattatttattcctacagccctcgagtttctgctgcatccagg
gaattgttcagtttggacccatcttctggcattatcactttctcaggggttgtagagacg
gagacacctcctgaacacaaactaagtgtgttcgcaaacagtgccccctgccctccagca
atagcagttgtaatagtttatttaagtcaggatacaaatcaacaaccagtgatagacatc
agctacatcgcaagtctggataatgatgatgttgtgttgaaggagaatgtacctgtgaac
acagcaatagcccttttggatgtaattgacccacataatattaaaggctcacttaacatc
gaaggagatgtccctttcattttaaaaccacaccatgggaaatatttactgctgacatca
aagccactcgactttgaacttgataaacaatacaatgtttttattgttgcacgagatgcc
aaccaaaagagcgttttccacaaaaggttaatccgaatcagagtaaatgatgtgaatgat
aatgctccaaggttctcccaaagatctgttgaagcttccattgaagaaaacaatgggcta
gacactcctttgatcagactaactgcaatagatgcagatagtgaccaaaacggaaaggtg
gtttacagtctaggcccagatgcaccacccatgtttgcgattaacacatcaacaggtgag
ctcacagtgtcttcagtactagaccgggaacaacaggatctttacaatttcacagtggtt
gctgctgatcagggtactccatctttagaaaccgtaaccactgtcctgatccgagtgctg
gaccaaaacgataacagaccacttttcattaccaacgagtttaccttcttcattccagag
aacttcccccgcctcggggaggtggcaattattaatgtgacggatgcagacacggggccc
aacggtaaagtgatggtttccatcctaaacagcactgtaccatttgtgatggacaatgct
agagggacactgcgttgctcttctgatatagacagagagacagcagacatacatgaaatt
tggattatggctatagacagtgggaatccagccttatcgaccactgccaaagtgaccatc
tttgttttagatatcaacgacaaccctcccaaggttctcctgcccaagaacaacttctcc
tgcctgccagttcctggaagcacagctcagggggcaacagttgctgagatttatgctatt
gatatggatgccgggatgaattcagttatcagctacaagatcattggaaaagaagctcct
ggccccagtccctttaagatcgattccttgacgggcaacataacccttcaggaaaagctt
ctgactaatcattacggcatgcaccacttatttattcaagtaagtgacggtggattaccc
aaacctctacaatccaccatttggattaatctttttgtgaatgaaactttaagcccttgt
gttttgaatacagtgcctgaaggtttttttcaagaacagcctctagaaatgcaaaactta
tgcggacgtgagttttctgaaatcctgtgcttgccattaacgtttattgttggtctggca
atgatgacagcttcccttatatttttcgcagcaggtatatatatgtttcgaaaagcaaca
gtgagcaacttgaggaatatgaataggcctgctcatgaggatgctgaaatccctttaaaa
ctgaaccaaaactatgacactagagactgggttgatgtacaataa

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