Acipenser ruthenus (sterlet): 117963468
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Entry
117963468 CDS
T07327
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117963468
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arut01009
]
117963468
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117963468
Protein phosphatases and associated proteins [BR:
arut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117963468
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117963468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
He_PIG
Motif
Other DBs
NCBI-GeneID:
117963468
NCBI-ProteinID:
XP_034759546
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Position
21:20864180..20869835
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AA seq
874 aa
AA seq
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MISGMDYRKHFKMDWARILQNCIGMLLLAHMVSSESVSEVTFSVKEEEDAGVSIGNIQQH
LIPLVSDGDTLTYKFLENNLYVTLDEITGFLYTTKHKLDREILCPPDHLGDCVLQLNAIV
MPDKYFKMIKVNIDIEDINDNAPYFLENNISLSISENTPVGTTIGIDHLALDKDTGTNSM
LTYLLENSDGFFSIALEGESLSVIIEKPLDRESLDVHQMKLIATDGGHPSLSGTAALNVQ
VEDANDNCPVFTSAEPILVTIPENAAADSIVAQVHATDADLGSNADIIYSYSPRVSAASR
ELFSLDPSSGIITFSGVVETETPPEHKLSVFANSAPCPPAIAVVIVYLSQDTNQQPVIDI
SYIASLDNDDVVLKENVPVNTAIALLDVIDPHNIKGSLNIEGDVPFILKPHHGKYLLLTS
KPLDFELDKQYNVFIVARDANQKSVFHKRLIRIRVNDVNDNAPRFSQRSVEASIEENNGL
DTPLIRLTAIDADSDQNGKVVYSLGPDAPPMFAINTSTGELTVSSVLDREQQDLYNFTVV
AADQGTPSLETVTTVLIRVLDQNDNRPLFITNEFTFFIPENFPRLGEVAIINVTDADTGP
NGKVMVSILNSTVPFVMDNARGTLRCSSDIDRETADIHEIWIMAIDSGNPALSTTAKVTI
FVLDINDNPPKVLLPKNNFSCLPVPGSTAQGATVAEIYAIDMDAGMNSVISYKIIGKEAP
GPSPFKIDSLTGNITLQEKLLTNHYGMHHLFIQVSDGGLPKPLQSTIWINLFVNETLSPC
VLNTVPEGFFQEQPLEMQNLCGREFSEILCLPLTFIVGLAMMTASLIFFAAGIYMFRKAT
VSNLRNMNRPAHEDAEIPLKLNQNYDTRDWVDVQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaggaatggattatagaaaacattttaaaatggactgggctagaatacttcag
aactgtattggcatgctcctgctggcccacatggtctccagtgagtcagtttctgaagtt
acattcagtgtcaaagaggaagaagatgccggtgtttctattgggaacattcagcagcat
ctcatccctctggtatccgatggagacacgttaacttacaagttcttggagaacaatcta
tacgtcaccctggatgagataactgggttcctgtacacaaccaaacacaaacttgacaga
gaaatcctgtgtccacccgaccacttgggtgactgtgtgctgcaattaaatgctattgtt
atgcctgataaatattttaaaatgattaaagtcaacatagacatagaagacattaatgac
aatgcaccctactttctggagaacaatatttccctgtcaatatccgagaacaccccagtg
ggaacgacaattggaattgaccatttggcccttgataaagacaccgggactaacagcatg
ctcacttacctgcttgaaaacagcgatgggtttttcagtatagcactagagggggagtca
ctttctgtcatcattgagaagccactggaccgggaatctctggatgttcaccaaatgaaa
ctcattgctactgatggagggcatccatctttatctggaactgctgccttgaatgtccag
gtagaagacgccaatgataactgtccagtgttcacttcagcagaacccatcctggtcact
attcctgaaaatgcagccgcagatagcatagtggcacaggttcacgcaactgatgcagat
ctcggctctaacgctgacattatttattcctacagccctcgagtttctgctgcatccagg
gaattgttcagtttggacccatcttctggcattatcactttctcaggggttgtagagacg
gagacacctcctgaacacaaactaagtgtgttcgcaaacagtgccccctgccctccagca
atagcagttgtaatagtttatttaagtcaggatacaaatcaacaaccagtgatagacatc
agctacatcgcaagtctggataatgatgatgttgtgttgaaggagaatgtacctgtgaac
acagcaatagcccttttggatgtaattgacccacataatattaaaggctcacttaacatc
gaaggagatgtccctttcattttaaaaccacaccatgggaaatatttactgctgacatca
aagccactcgactttgaacttgataaacaatacaatgtttttattgttgcacgagatgcc
aaccaaaagagcgttttccacaaaaggttaatccgaatcagagtaaatgatgtgaatgat
aatgctccaaggttctcccaaagatctgttgaagcttccattgaagaaaacaatgggcta
gacactcctttgatcagactaactgcaatagatgcagatagtgaccaaaacggaaaggtg
gtttacagtctaggcccagatgcaccacccatgtttgcgattaacacatcaacaggtgag
ctcacagtgtcttcagtactagaccgggaacaacaggatctttacaatttcacagtggtt
gctgctgatcagggtactccatctttagaaaccgtaaccactgtcctgatccgagtgctg
gaccaaaacgataacagaccacttttcattaccaacgagtttaccttcttcattccagag
aacttcccccgcctcggggaggtggcaattattaatgtgacggatgcagacacggggccc
aacggtaaagtgatggtttccatcctaaacagcactgtaccatttgtgatggacaatgct
agagggacactgcgttgctcttctgatatagacagagagacagcagacatacatgaaatt
tggattatggctatagacagtgggaatccagccttatcgaccactgccaaagtgaccatc
tttgttttagatatcaacgacaaccctcccaaggttctcctgcccaagaacaacttctcc
tgcctgccagttcctggaagcacagctcagggggcaacagttgctgagatttatgctatt
gatatggatgccgggatgaattcagttatcagctacaagatcattggaaaagaagctcct
ggccccagtccctttaagatcgattccttgacgggcaacataacccttcaggaaaagctt
ctgactaatcattacggcatgcaccacttatttattcaagtaagtgacggtggattaccc
aaacctctacaatccaccatttggattaatctttttgtgaatgaaactttaagcccttgt
gttttgaatacagtgcctgaaggtttttttcaagaacagcctctagaaatgcaaaactta
tgcggacgtgagttttctgaaatcctgtgcttgccattaacgtttattgttggtctggca
atgatgacagcttcccttatatttttcgcagcaggtatatatatgtttcgaaaagcaaca
gtgagcaacttgaggaatatgaataggcctgctcatgaggatgctgaaatccctttaaaa
ctgaaccaaaactatgacactagagactgggttgatgtacaataa
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