Acipenser ruthenus (sterlet): 117963535
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Entry
117963535 CDS
T07327
Name
(RefSeq) protocadherin-19-like isoform X1
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117963535
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117963535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
117963535
NCBI-ProteinID:
XP_034759922
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Position
21:22950677..22996413
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AA seq
1093 aa
AA seq
DB search
MDVLHILPIFLLCWTQAGAVINLKYSVDEEHRAGTVIANIAKDAKDAGFVVDLRQPAFRV
ISNSAPHLLDINPAGLLVTKQKIDRDIFCRQAPKCVVSLEVMSNSMEICVIKVEIKDLND
NAPSFPTDHIDLEISETATPGTRIPLEGANDPDSGSFGVQTYEITPNDLFGLAIKTRGDG
SRFAELVVEKSLDREMQSHYSYMITALDGGDPPNFGTVELNIKVIDSNDNNPVFDEPVFT
VDVLENSPINTIVIDLNATDPDEGTNGEVVYSFNSYVSEKTRDVFKIDPRTGVITVSGML
DFEDTQVYEIDVQAKDLGPNSIPAHCKVTVKVQDANDNVPVINLLSVNSEMVEVSENAPL
GYVIALVRVSDRDSGSNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQKDTYNLTIL
AKDNGIPSLQNTKSFIVKVTDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGS
NGSVSYQILQSQVRDMAVFTYVSINPTGDIYALRSFNHEQTRSFEFKVLAKDGGNPSLTS
NATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRITY
SISEGDRSFFEIDQVNGEVRTTRTFGENAKTTYELIVVAHDHGKTSLSASALILIYLSPA
LDAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSCVFLRRVAE
YSYGSQKKSNKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCR
RTESTFLNVENQNSRNAAPNHGYHQTFTGQGPQQQPDLIINGMPLPETENYSIDSSYVNS
RAHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYADTAVNDVLNMSVPSAGSQ
LPDQDPNETFHCREECRILGHSDRCWMPRVGVPARAKSPEHGRNIIALSIEATTVDVQPY
EDCGTKRTFATFGKDGSEHGQDLERGEVKVKRTVDVPICSPKANGAIREAGNGREDVSPL
TSPVHLKSPLCSKPPASYSTLHRRDAERIANHSLLRQPEGKDSEPSVREINQLLHDSRDK
DSPGGKRLKDIVL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggatgtattacacattctaccgatttttctactgtgctggactcaagcaggagctgtg
atcaatctgaaatattctgtggacgaggagcacagagccggcactgtgattgctaatatt
gcaaaggatgctaaagatgctggatttgtggtcgatctcaggcagcctgcctttcgagtc
atctctaattccgcaccgcatttgctggacatcaatcccgcgggtctgctggtcaccaag
caaaaaattgaccgggatatattttgcaggcaggcccccaaatgcgttgtctcattggaa
gtgatgtctaactctatggaaatatgtgtgattaaagttgagataaaggacctaaatgac
aatgcaccaagtttccccacagaccacatagaccttgagatttcagaaacggcaaccccg
ggcactaggatccccctagaaggcgctaacgaccccgattccgggagctttggggtgcag
acctatgaaatcaccccgaatgatctgtttggactggcgatcaagaccaggggagacggg
tccaggtttgcagagctagttgtagagaaaagcttagacagagaaatgcagtcccattac
agctacatgatcaccgcattggacgggggtgacccccctaattttggcacagttgagctg
aatatcaaagtgatagactctaatgacaataaccccgttttcgacgagcctgtcttcact
gtagacgtgctggaaaactctcccattaacactatagtgatcgacttgaatgcaacagat
ccagacgaaggaacaaatggggaggtggtgtactcatttaacagttatgtgtctgagaaa
accagagacgttttcaagattgaccccagaactggagtgatcacggtcagtgggatgttg
gacttcgaggacacccaagtttatgagattgatgttcaagccaaagatctgggtccaaac
tccatccctgcgcattgcaaagtgactgtcaaggttcaggatgcaaacgataatgttcca
gtaattaatttactgtctgtgaacagtgaaatggtggaagtaagtgagaatgctcctctg
gggtatgttatagccttggttagggtctctgatagagactcagggtccaatggacgagtg
caatgcagactgctgggcaacgttcctttcaggctgcaggaatatgaaagtttttccacc
attttagtggatgggaggctagacagagagcagaaggatacttacaacttgaccatctta
gccaaagacaatggcatcccttctctacaaaacaccaaatcatttattgtgaaagtcacc
gacgagaacgataaccacccccacttttccaagccatattatcaagtgattgtccaagaa
aacaacacgccaggcgcttacctgttgtcggtttcagccagggacccagacctgggatcg
aacggcagtgtttcttaccagatcctgcaatctcaagtcagagacatggcagttttcacc
tatgtgtctataaacccaacgggtgatatctatgctctgagatctttcaaccatgaacag
accaggtcctttgaattcaaggttttggccaaagatgggggtaacccatccctcaccagc
aacgccactgtgcgcgttatagtattagatgtcaatgataacacaccagtcataaccgca
ccacctttggtaaatggaaccgctgaggtgtacatcccgagaaatgcaggtgtgggctac
ctggtgaccgtagtaaaagccgatgactatgacgagggcgaaaatggacgaataacatat
tctatttccgaaggggacaggagtttctttgagattgaccaggtcaatggagaggtccgg
accactaggacctttggagagaacgcaaagactacatatgagttgattgtggttgcccac
gaccacggcaagacgtctctgagtgcctctgccctgattctgatctatctctcaccggcg
ctggatgcacaggagtctataggaccagtaaatttgtcgctgatattcatcattgctctg
ggctccattgctgctattctatttgtcactatgatcttcgtggcagtcaagtgcaaaagg
gacaacaaggaaatcaggacatacaactgcagttgtgtctttctgcgcagggtggcggag
tactcgtacggcagccagaagaaatccaacaagaagaagaagatcagcaagaacgacatc
cgtctggtcccgcgcgacgtggaggagacggacaagatgaacgtggtgagttgctcctcg
ctgacctcctcgctcaactacttcgactaccaccagcagaccctgccgctggggtgccgg
cgcacggaaagcaccttcctcaacgtggagaaccagaattctcgcaacgctgcccccaac
cacggctatcatcaaaccttcaccggccagggcccacagcagcagcctgacctcatcatc
aacggcatgccactgccagagactgaaaactattccattgattccagttatgtgaacagc
agggctcacctcattaaaagcacttcaacgttcaaggacttggaagggaacagtctcaag
gacagtggtcacgaagagagtgaccaaactgacagtgaacatgatgtccagagagggctg
tacgctgacacggccgtcaatgatgtactaaatatgagtgtgccctccgctggctctcag
ctccccgaccaagatccaaatgagacctttcactgccgggaggaatgccggattctcggg
cactcagaccgctgctggatgccacgagtcggagtaccagcccgagccaaatctccggag
catggacgcaacatcattgccctgtccatagaggccaccacggtggacgtccagccctat
gaggactgtggcaccaaaaggacttttgccaccttcggcaaggacggctctgagcatggc
caggatctggaaaggggcgaggtgaaagtgaaaaggacagttgacgtacccatctgcagc
cccaaggccaacggggcgatccgtgaggcagggaacgggcgagaggacgtgagccccctc
acatcccctgtgcacttaaagagccccctctgctccaagcccccagcctcttacagcacc
ctgcaccgccgcgacgctgagaggatcgccaaccacagcctgctgcgacagcccgagggg
aaggatagcgagccatcggtcagggaaatcaaccaactccttcacgacagcagagacaaa
gactcaccaggcgggaaacggctcaaagatattgttctctaa
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