Acipenser ruthenus (sterlet): 117963556
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Entry
117963556 CDS
T07327
Name
(RefSeq) helicase ARIP4-like isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117963556
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
117963556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
117963556
NCBI-ProteinID:
XP_034760041
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All DBs
Position
21:complement(2190094..2221739)
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AA seq
1459 aa
AA seq
DB search
MSEEASSGSDADQDLDPNLDGEEEEEEEMEEDNDGDDEEDVNDKTDQPQTSPCSTEQDPE
SDGTGWQSTTPTTSQQGELPLPSKSPLAHSAKKKRAVQKPPHMRRNIRKLLREHQLEAVT
KAAQQEEAERRKRLDQQRKDYPVPDCIQGEVVLRTDEVSQSTPHATKQDVICLDSSNNSG
SASEDETKRILHSIRDDVIELSSGEEETLQISSESTNEEEEEGVGGSEESSGAHINDALN
HPDAQGRVLVNINHPSTEKDLYLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSSGFG
CILAHSMGLGKTLQVISFVDILLRHTSARTVLAIVPVNTLQNWLAEFNMWLPAQEALPQD
YNPEEILPRTCKVHILNDEHKTTVARAKVISDWSAGGGVLLMGYEMYRLLSLKKSFVTGR
KKKPKKPTGPVIIDLDEEDRQQELLKVMEKALSRPGPDVVICDEGHRIKNCHASTSQALK
SIHTRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQD
RRLMRYRSHVLHSLLEGFVQRRGHDVLQNHLPSKEEHVIMVRLSPIQRALYTEFMDRFRE
AGNSGWLGLNPLKAFCVCCKIWNHPDILYEVLQKQNLANEQDLDLDDITTSNNRCQPQGI
KPKPEPSTAAGTDASNSKYNLGGISLGVMQEKANQVMTYEWAKDIMSDYQTGLLENSAKM
VLLFHLIDESVSQGDKFLVFSQSLSTLSVIEAFLAKRPMPDSRGTEGQGCNWVRNVNYYR
LDGGTSTSERERLINQFNDPRNDKAWLFLLSTRAGCLGVNLVGANRVVVFDASWNPCHDA
QAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDLNPVMNFTRREVE
SLLHFVEEEPAPAKVQLEPNEHLERVLHRAYTLYPHFITKQPFQHESLLMDRKEQKLTKA
EKKAAKKSYEDEKRACVPYTRPSYAHYYPASDQSLTNIPAFSQRNWRPPPRLDEKPVASV
RPVQSTPIPMMPRQVPMGASSSIAGSSSALNFPVNFLQQAGVLVQKIVTTTDIVIPGTDS
LTDVQARINAGESIHVIRGTKGTYIRTSDGRIFAVRAARKSRQGQENSDGSLGSQRPALE
STSNGSNGSASPDSKRKHLTPDSLTRPLSPDSPEIISELQQYAALAAVRETGDNPASTTE
TQGGSSSSAQGISAEQLLVMHGLNPGPSLNTPASSQPAESSSSSSSGRNSRGEGGAAEAL
DLRGSKRKSSTPACDEQSARKQQQTSKRTSVPLQGYPLTGGYNLPPMGLNPALTNPLLAQ
MGHPMFMGPGSPYFQAHGQMRDPRLMFADPFSLGGASAPSSSSSSSAAASASMSPFMLSP
SLGGMLPGFPLPYGQSLMPEPRMYAPYPSTHLLPGGLPATPGPTGSGYLPGFPPQTEPQI
LSESDSSGSDDDVIEVTGQ
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaggcaagctcagggagcgatgcggaccaggacctggatccgaacctggat
ggcgaggaagaggaagaggaggagatggaggaggacaacgatggagacgacgaagaggac
gtgaatgacaaaactgaccagcctcagacttccccttgcagcacggagcaggatcccgag
agcgatggcacaggctggcagagcaccacgccaactacctcacagcagggcgagctgccc
ctgcccagcaagagcccgctcgcccacagcgccaagaagaagagggcagtgcagaaaccg
cctcacatgaggaggaacatcagaaagctcttgcgtgagcaccaacttgaagcggtgacc
aaagctgcccagcaagaggaggcggaaaggcggaaacggctggaccagcagaggaaagac
tacccagtgcctgactgtatacaaggggaagtagttctaaggactgacgaggtttcccaa
agcacaccccatgccaccaagcaggatgtgatctgcctggacagcagcaacaacagtggg
agtgccagtgaggatgagaccaagagaatattgcacagcattagggacgatgtgatcgag
ttgagctcgggggaggaggagaccctgcagatcagcagcgagtcgaccaatgaggaggag
gaggagggggtgggcggctcagaggagagtagcggggcgcacatcaacgacgccctcaac
caccctgacgcccagggccgtgtcctggtcaacatcaaccacccgtcgacagagaaggac
ctctaccttgccccgcagctggcacgggccgtcaagccacaccagattggtgggatccgt
ttcctctacgataacctggtggagtctctggagcgctttaaaaccagcagcggattcggc
tgcatcctggcacacagcatgggcctcggcaagaccctgcaggtcatctccttcgtggac
atccttctgcgccacacctctgctcggactgtgctcgccatcgtgcctgtcaacacgctg
cagaactggctggctgaattcaacatgtggctgccagcccaagaggctcttccccaggac
tataacccagaggagatcctgccccgcacttgcaaagtccacatcctcaacgatgaacac
aagacaacagtagctcgagcgaaggtgatcagtgattggtcagcgggtggtggcgtgctg
ctgatgggctatgagatgtaccgtctgctctcgctgaagaagagctttgtcacggggagg
aagaagaaacccaagaagcctacgggtcctgtcatcattgacctggatgaagaggacagg
cagcaggaactgctgaaagtgatggagaaagctctgtcgaggcctggcccagacgtggtg
atctgtgacgaggggcaccgcattaagaactgccacgccagcacctcgcaggccctgaag
agcatccacacacggcgcagggtggtgctgacgggctacccgctgcagaacaacctcatc
gagtactggtgcatggtggacttcgtgcggcccgacttcctgggcacgaggcaggagttc
agcaacatgttcgagaggcccatcctcaacgggcagtgtgtggacagcacgccccaggac
aggaggctcatgaggtaccgcagccacgtgctgcacagcttgctggaggggttcgtgcag
agacggggtcacgacgtgctgcaaaaccacctcccatccaaggaggagcacgtgatcatg
gtgcgcctctccccgatccagagggccctctacaccgagttcatggaccgcttccgagag
gcgggcaacagcggctggctggggctgaacccccttaaagcattctgcgtctgctgcaag
atctggaaccacccggacattctgtacgaggtcctgcagaagcagaatctggccaacgag
caggaccttgacctggatgacatcaccacttccaacaaccgctgccagccccaagggata
aagcccaaaccggagcccagcactgcagccgggacagacgcttccaacagcaagtacaac
ctgggggggattagcctgggcgtcatgcaggagaaggctaaccaggtcatgacctacgaa
tgggcaaaagacatcatgtccgactaccagacaggattgctggagaactcggccaaaatg
gtccttctgtttcacctgatagacgagagtgtcagccagggagataaattccttgtcttc
agccaaagtctctctaccttgtctgtgattgaggcgtttctggctaagaggcccatgcca
gactcacgggggacggaagggcagggctgcaactgggtgcgaaatgtcaactactatagg
ctggatggtggcacctcgacttcagaaagggagcggttgataaaccagttcaatgacccg
cggaatgacaaagcctggctcttcctgctgtccacgcgggcggggtgccttggcgtgaac
ttggtgggtgctaatcgggtggtggtgttcgacgcctcttggaacccgtgtcacgatgcc
caggccgtgtgcagggtctaccggtacgggcagaagaagccctgccacatctatcgcctg
gtgtcagactacaccctggagaagaagatctacgaccggcagatctccaagcagggcatg
tcagatagagtggtggatgacctgaaccctgtgatgaacttcacccggcgggaggtggag
tccctgctacactttgtggaggaggagccggccccagccaaggtccaactggaacccaac
gagcacctggagagggtcctgcatagagcctacaccctgtacccccacttcatcaccaag
caacccttccagcatgagtctctgctgatggatcgcaaggagcagaagctcaccaaggca
gagaagaaggcagcaaagaaaagctacgaggatgaaaagcgggcttgtgtgccctacacc
cgcccgtcctacgcacactattaccctgccagtgaccaaagtctgaccaacatccctgca
ttcagccagagaaattggcggccccctcctcggctggatgagaagccagtagccagtgtc
cggccggtccagtccactcccattcccatgatgcctcggcaggttcccatgggggcgagc
tcctccatcgccgggtccagctccgctctcaacttccccgtcaacttcctacagcaagcc
ggagtgcttgtgcaaaagatcgtcaccaccacagatattgttattccaggaactgacagc
ttaactgatgttcaagctcggatcaatgctggagagagtatccatgttatcagaggaaca
aaagggacctacatccgcacgagcgacgggaggatctttgctgttcgagcagcaagaaag
tccaggcaggggcaggaaaacagcgacggctctttaggttctcaaaggccagctctggaa
tccaccagcaatgggagcaacggctcagcgtctcctgactcaaagaggaagcacctgacc
ccagacagcctaacccggcctctgtctccagacagcccagagatcatcagcgagctgcag
cagtatgcagctctggcagccgtgcgagagaccggagacaatcctgcgtcgaccacagag
acgcagggaggcagcagcagcagtgcacaggggatctcagcagaacagctgctggtgatg
catggcttgaatccagggcccagcttaaacacccccgcttccagccagccagcagaaagc
agcagcagcagcagcagcgggaggaatagcaggggcgagggaggggcagcggaagccctg
gacctgcggggcagcaagcgcaagtcgtccacccctgcgtgcgacgagcagtcagcacgc
aagcagcagcagacgagcaaaaggacttcagtgcctctgcagggctacccgctcactggg
ggttacaaccttccacccatgggcctgaaccctgcactcaccaaccccttactagcccag
atgggacaccccatgttcatgggcccagggtccccttacttccaagcccacgggcagatg
cgggaccccaggttgatgtttgcggaccccttcagcctcgggggggcgagcgcccccagc
tcatcgtcgtcctcctccgctgctgcctcagcctccatgtccccctttatgctcagcccc
agcctgggcgggatgctcccgggcttcccactcccctacggccagtccctcatgccggag
cccaggatgtatgcgccttacccgtctactcacctgctgccaggtggccttccagccact
ccaggacccaccgggtcaggctacctgcctggcttccctccccagacggagcctcagatc
ctctctgagagcgacagcagcggctcggacgacgatgtgatcgaggtgactggacagtga
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