Acipenser ruthenus (sterlet): 117963647
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Entry
117963647 CDS
T07327
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117963647
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117963647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Chromo_MIT1
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
117963647
NCBI-ProteinID:
XP_034760386
LinkDB
All DBs
Position
22:28030509..28061984
Genome browser
AA seq
1970 aa
AA seq
DB search
MPGSVSNEGERQDEMDFGDDMPDEEEEEEDEAEPAPVPLAALQGFFREDDPVKQQPKKKK
PCKPKQGKTTQLSKRKKEGGGSEEEAAPMCLKELEGDRSESEGSDYSPIKKKKKPREKKE
KKTRRKKKDEEEEEEEEEDVGLKEPKSSAQLMEEWGLENVDYAFTEEDYHTLTNYKAFSQ
FLRPLIAKKNPKIPMSKMMTVLGAKWREFSSNNPFKGLSAAAAAAAVAAAVETVAVSPPV
PQPAQPGAVRKAKTKEGKGPGARKKSKNTKEAKKKGKGKKMKIRLGGFGSKRKKSSSSEE
DEREESDFDEGSIHSTSVRSEASLQQKRKGRKGQQKKKKIEEGDGYETDHQDYCEVCQQG
GEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEMGEEEED
DHLEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQRIL
HWIWGEPPLPPECPPASGAPDPRAPRPQPPLKGHPERELYVKWAGLSYWHCSWVSELQLE
LYHTVMYRNYQRKNDMDEPPPYDYGSENEEMKSEKRKSKDPQYTLMEERFYRYGIKPEWM
IIHRVFNHSFDNNGDVHYLIKWRDLPYDQSTWEIDDFDIPEYNHFKQAYWNHRDLMLGED
IRPPGIKKGRKMKDDKPPETPNVDPTIKFDKQPWYIDSTGGSLHPYQLEGLNWLRFSWAQ
GTDTILADEMGLGKTVQTIVFLYSLYREGHSKGPYLVSAPLSTIINWEREFEMWAPDFYV
VTYTGDKDSRAVIRENEFSFEETPVKMGRKVFRMKKDTPIKFHVLLTSYELITIDQAILG
SIEWACLVVDEAHRLKNNQSKFFRVLNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPER
FNNLDGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQK
KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLANGSYDGN
SLVRSSGKLTLLQTMLRKLKDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG
LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI
GQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGT
EELFKDDVEGARANGDNKDGEEGNVIHYDDNAISTLLDRSQDATDDTELQNMNEYLSSFK
VAQYVVREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQV
NYNDTSQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPL
LARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKDFRAYVSLF
MRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHINGKYSTPDLIL
DGAEMKRLTESISSDPNTPVPASPAATQPGTPVPTAEKTETPSGPAEEKETPELEVKKPA
GPEQVPSSSESSPSSEKPPPVEESKEQVKEERGLEESESPELAQEDPGTTGEACKEGERR
PEKAESNSVSSRGEDKDPQPGEEVKKEETPENQQNGEKEGKEEEEGRKDEKNAKMKFMFN
IADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYV
ILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDSSHPAIALN
ARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIP
PVAARLQMSERSILSRLTNRGNEPPPQQPFPQGSFSCSQMYGNSFGTSFRGPGAGGIVNY
SQMPLGPYVSASSNGPPSSHSEKKLSESLKDGAAPEHKGGKPSDVICIED
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcagtgagtaacgaaggcgaaaggcaagacgagatggattttggggacgat
atgccagacgaggaggaggaggaggaggatgaagcagagccggcgccagtgcccctcgct
gctctccagggattcttcagagaggacgaccccgtcaaacagcagcccaagaagaagaag
ccgtgcaaacccaagcagggcaaaaccacccagctgagcaagaggaagaaggaggggggc
ggtagtgaggaggaggcggcgcccatgtgtctgaaagagctggagggggacaggtcggag
agcgagggcagtgactactcccccatcaagaagaagaagaaacccagggagaagaaggag
aagaagaccaggcggaaaaagaaagacgaggaggaggaggaggaggaagaggaggatgtg
gggctcaaggagcccaagtcctctgctcagctgatggaggagtgggggctggagaacgtg
gactatgccttcacagaggaggactaccacactttgacaaactacaaagctttcagccag
ttcctgaggcctctcattgccaagaagaaccccaagatccccatgtcgaagatgatgacg
gtcctgggtgcgaagtggcgcgagttcagcagcaacaacccgttcaagggcctgtctgcc
gccgctgccgccgcggccgtggctgctgccgtggaaaccgtggctgtgtccccgcccgtc
cctcagcccgcgcagcctggagcagtcaggaaagccaaaaccaaagaagggaaaggcccg
ggggcgagaaagaaaagtaaaaacacgaaggaagccaaaaagaaaggcaagggcaagaag
atgaaaatcagactgggcgggttcgggagcaagaggaaaaagagctcctcgagcgaggag
gatgagcgggaggagtctgatttcgacgagggcagcatccacagcacctcggtgcgctcc
gaggcctccctgcagcagaagaggaaggggcgcaagggccagcagaaaaaaaagaagatt
gaagaaggggacggttacgagacggatcaccaggattactgtgaggtgtgccagcagggc
ggagagatcatcctgtgcgacacctgtcctcgagcctaccacctggtgtgcctggatccc
gagctggagaaggctcctgaggggaagtggagctgcccgcactgcgagaaggaagggatc
cagtgggagcccaaggaggaagaggaggaagaggaggagatgggggaggaggaagaggac
gaccacttggagttctgccgggtgtgcaaggacgggggggagctgctgtgctgcgacacc
tgcccctcctcctaccacctccactgcctcaacccgcccctgccagagatacccaatggg
gagtggctgtgcccgcgatgcatgtgcccgcccctgaaagggaaggttcagcggatcctg
cactggatatggggggagccccccctgcccccggagtgccccccagcctctggagctccg
gatcccagggccccccggccccagccacccctgaaggggcaccctgagagggagctgtat
gtcaagtgggccgggctgtcctactggcactgctcgtgggtcagtgagctgcagctggag
ctgtaccacacggtgatgtatcgcaactaccagcgcaagaacgacatggacgagcccccc
ccctacgactacggctcggagaacgaggagatgaagagtgagaagcgcaagagcaaggac
ccccagtacaccctcatggaggagcgtttctatcgctacgggatcaaaccagagtggatg
atcattcacagggtcttcaaccacagcttcgataacaatggagatgtccactacctgatc
aagtggagagacttgccttacgatcagtctacctgggagattgacgactttgacattcca
gagtacaaccatttcaaacaagcctactggaatcacagggacctcatgctgggagaggac
atccgacccccagggatcaagaaggggaggaagatgaaggacgataagcccccggagacg
cccaatgtggacccgacaatcaagtttgacaagcagccgtggtacatcgactcgacgggg
ggcagcctgcacccctaccagctggaggggctgaactggctgcgtttctcctgggcgcag
ggcaccgacaccatcctggcagacgagatggggctgggcaagactgtgcagaccatcgtc
ttcctctactcgctctacagagagggacactccaaggggccgtacctggtcagcgccccg
ctgtccaccatcatcaactgggagcgcgagttcgagatgtgggcgccggacttctacgtg
gtcacctacaccggggacaaggacagccgtgcggtcatccgcgagaacgagttctccttc
gaagagacccccgtcaagatgggccgcaaggtctttcgcatgaagaaggacactccgatc
aagttccacgtgctgctcacctcctacgagctgatcaccatcgaccaggccatcctgggc
tccatcgagtgggcctgcctggtggtggacgaggctcaccggctcaagaacaaccagtca
aagttctttcgagtgctgaacggctacaagatctactacaagctgctgctgactgggacc
cccctgcagaataacctggaggagctcttccacctgctcaacttcctcacccctgagagg
ttcaataacctggacggattcctggaggagttcgctgacatctcgaaggaggaccagatc
aagaagctgcacgacctgctggggccccacatgctgaggaggctgaaggccgacgtcttc
aagaacatgccgtccaagacggagctgatcgtgcgggtggagctgagccccatgcagaag
aagtactacaagttcatcctgacgcggaacttcgaggctctgaactcgaaagggggcggg
aaccaggtgtctctcctcaacatcatgatggacctgaagaagtgctgcaaccacccctac
ctgttccccgtcgccgctgtggaggctccggtgctcgccaacggctcctacgatgggaac
tcgctggtcaggtcctcggggaagctcacgctgctccagaccatgctgaggaagctgaag
gacggaggacaccgagtcctcatcttctcacagatgacgaagatgctggacctgctggag
gacttcctggagtacgaggggtacaagtacgagaggatcgacggggggatcacggggggg
ctgcggcaggaagccatcgaccgcttcaatgctcctggcgctcagcagttctgcttcctg
ctctccacgcgggcgggggggctgggcatcaacctggcgaccgccgacacggtcatcatc
tacgactcggactggaacccccacaacgacatccaggcgttcagccgagctcaccggatc
gggcagaacaagaaggtgatgatctatcgcttcgtgacccgggcctcggtggaggagcgc
atcacgcaggtggccaagcgcaagatgatgctgacccacctggtggtgcggcccggcctg
ggctccaagaccggctccatgtccaagcaggagctcgacgacatcctcaagttcggcacg
gaggagctgttcaaggacgatgtggagggagcccgggccaatggtgacaataaggacgga
gaggagggcaacgtgattcattacgatgacaacgccatctccacactgctggaccgcagc
caggatgccaccgacgacacggagctgcagaacatgaacgagtacctcagctcctttaag
gtggcgcagtacgtggtgcgggaggaggatggtgaggaggaggtgcagcgagagattatc
aagcaggaggagaacgtggatcctgattactgggagaagctgctgaggcatcactacgag
cagcagcaggaagacctagccaggaacctgggcaaggggaagagagtgcgcaagcaggtc
aactataacgatacctcccaggaggaccaagagtggcaggatgatctttcagacaatcag
tccgagtactccgtgggatccgaagatgaggatgaagattttgaggagagaccggaagga
ggacgcaggcagtctcgcagacagctcaagagtgaccgggacaaaccactccctccgctg
ctggccagagtcgggggcaacattgaggtcctggggttcaatgcccggcagcggaaagcc
ttcctgaatgccatcatgcgctgggggatgccaccccaagatgccttcaactcccactgg
ctggtgagagacctgcggggcaagagtgagaaggacttcagggcctacgtgtccctcttc
atgcgacatctgtgtgagccgggggctgacggagccgagaccttcgcagacggggtcccg
cgagaggggctgtcccgccagcacgtcctcacgcgcatcggggtcatgtctctcgtgagg
aagaaggtccaggagtttgagcacatcaacgggaagtacagcacccctgacctgattctc
gacggagccgagatgaagagactgacggagagcatctcatcggaccccaacacacctgta
cctgccagccccgccgccacccagcctggtacacctgtacccacagcagaaaagacagag
actccctcgggaccagcagaggagaaggagaccccagagctggaggtgaagaaaccagcc
gggcctgagcaggtccccagcagcagcgagtcttcccccagctcagagaagcccccccca
gtggaggagagtaaggagcaggtgaaggaggagcgagggctggaggagagtgagagtcct
gaactggcccaggaggaccctggtaccacaggggaggcttgtaaagagggagagagacgc
ccggagaaggcagagagcaacagcgtctcgagcagaggagaggacaaggacccccagcca
ggagaggaggtaaagaaggaagagacgcctgaaaaccagcagaacggagagaaagaaggg
aaggaggaagaggaggggaggaaagacgagaagaacgccaagatgaagttcatgttcaac
atcgcggacggtggattcacagagctgcacacgctgtggcagaacgaggagcgagcggct
gtgtcgtcggggaagatctacgatatctggcaccggagacacgactactggctgctcgcc
ggcatcgtcacgcacggctacgcgcgctggcaggacatccagaacgaccctcgctacgtc
atcctcaacgagcccttcaagtccgaggtgcacaagggcaactacctggagatgaagaac
aagttcctggcgcgccgcttcaagctgctggagcaggccctggtgattgaggagcagctc
cgacgcgctgcctacctcaacatgacgcaggactccagccaccccgccatcgctctgaac
gcccgcttcgcggaggtggagtgcctggctgagagccaccagcacctgtccaaggagtcc
ctggcagggaacaagcccgccaacgccgtcctacacaaggtgctgaaccagctggaggag
ctgctgagcgatatgaaggcggatgtgacgaggctgccctctatgctgtcgcggatcccc
cccgtcgcggcgcgcctgcagatgtccgagcgcagcatcctgagccggctgaccaaccga
ggcaacgagccccctccccagcagcccttccctcaaggctctttcagctgctctcagatg
tacggcaacagctttgggacaagcttccgagggccaggagccggggggatcgtcaactac
agccagatgcctttaggaccctacgtgtcggcctcttccaacgggcctccatcgagccac
tctgagaagaagctgagcgagtctctgaaggacggggccgcgccggagcacaaagggggc
aagcccagcgacgtgatctgcatcgaagactag
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integrated database retrieval system
