KEGG   Acipenser ruthenus (sterlet): 117963901
Entry
117963901         CDS       T07327                                 
Name
(RefSeq) negative elongation factor D-like
  KO
K15181  negative elongation factor C/D
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117963901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arut03021]
    117963901
Transcription machinery [BR:arut03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     117963901
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 117963901
NCBI-ProteinID: XP_034761442
LinkDB
Position
24:complement(26785107..26792605)
AA seq 579 aa
MEEDYYHSSAEWNGQDGSLDDGYVDGEADGKIQGECMEKFSSRDYIMEPSIFTSLKTYFQ
AGGSPEHVIQLLSENYTAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKTLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFTKMVCHGEHTYLFAQSMMSILAQE
EQGGSAVRRIAQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIKTEGECDAVAEFIAHCKSNFIMMN
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggaagaggattattatcacagctcggcagaatggaacggacaagatggatctctggac
gacggatacgtggacggggaggctgatggtaagattcagggcgaatgtatggagaagttc
tccagtcgggattatatcatggagcccagcatctttacctccttaaagacgtacttccag
gctggtgggtccccggagcatgttatccagcttctgtctgagaactacactgcagtggca
cagactgtcaacctgctggcagagtggctcattcagatgggagtggagccggctcaggtt
caggagagagtggagaaccacctgaaaaccctgctgataaaacacttcgaccctcagaag
gctgactccatcttcacagtggagggagagactcctgcgtggctggagcagatgattgct
cacacaacctggcgagatctcttctacaagctagctgaagctcatccagactgtttgatg
ttaaacttcactgtcaagctcatctcggacgctgggtaccaaggagaaataaccagcgtc
tccacagcctgccagcagctggaggtgttctccagagtgctgcggacctcgctggccact
ctgctggacgggggagaggagaacctggagaagaacctcccggagttcacgaagatggtg
tgccacggggaacacacctacctgtttgcccagtccatgatgtcaatactggcccaggaa
gaacaaggaggctcggcagtgcgcaggatcgctcaggaggtccagaaatctgctcatgaa
agggggcatgatgccagccagatcactctggcgctaggaacagccgctgcctaccctcgt
gcgtgccaggcactcggagccatgctgtccaaaggagccctgaacccggctgacatcacc
gtcctcttcaagatgttcaccagcatggaccctccccccgtggagctgatccgggtccca
gccttcctggatctcttcatgcagtccctcttcaaaccaggtgcgaaaatcaaccaggac
cacaagcacaagtacatccacatcctcgcctacgcagccagtgtggtggagacctggaag
aagaacaaacgagtgaacatcaacaaggacgagctgaagtccacctcgaaggccatcgag
acggtccataacctgtgctgcaatgagaacaagggggccacagagctggtggctgagctc
agcacactgtaccagtgcatcaggttcccagtggtggcgatgggtgtgttgaagtgggtt
gactggacagtttctgagcctcgctatttccagctccagacagaccacactcctgtacac
ttggccttgttggatgagatcagtacctgtcaccagctcctgcacccccaggtcctgcag
ctcctcatcaagctctttgagacggagcactctcagctcgacgtcatggagcagatggag
ctgaagaagaccctgctggacaggatggttcatttgctgagcagaggctacgttctgccg
gtggtcggctatattcgcaagtgcctggagaaactgaacacggacatctctctcatcaga
tacttcgtgactgaggtactggatgtgatcgctcctccttacacatcagacttcgtgcag
ctgttcctgcccattttagagaacgacagcatcgctgggaccattaaaacagagggggag
tgtgatgctgtagcagagtttatagcacactgtaaatctaacttcatcatgatgaactga

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