Acipenser ruthenus (sterlet): 117963909
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Entry
117963909 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1-like isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117963909
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117963909
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
117963909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
117963909
NCBI-ProteinID:
XP_034761529
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All DBs
Position
24:12640365..12682787
Genome browser
AA seq
1733 aa
AA seq
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MAEGEETAVRLLRMQWQDSPVCGPELYRYLAEQVPRIYCTSEKTGLSEEEEEMVGTTLLR
PLEWYLFGEDPQLGLEKLQQGSGSSQLCGRVFKEGETTYTCRDCAIDPTCVLCMDCFQNS
VHRNHRYKMHSSSGGGFCDCGDMEAWKTGPSCKKHEPGAEGDTDMGAESQLEDGLMERAR
MLFQVLFKYTVDMLVWEEGQELPAELQPSVKEDTYYCVLYNDEHHSYDHVIYTLQRSVQC
DLGEAQTHTNLIDKEGRRAVKRGTLQACQEAKQAIQSNSEHISLQPLRVEILHSAVMAHQ
SFALRLGTWFQQVVNYSVGFRQVFCQVSLQAALDPELHCLISRLMLCDAKLYKGARKIVH
DLIVCSLLMETEYKRLFAIEFAKNYKQLQEDFINDDHERSISVTALSVQIFTVPTLARQL
IEEGNVVKVIIDTVMEMLSEHLDDNNRFHFQGYNSERFFRIQVVFHDLKYILMSKPTIWT
ERLRQQFLEGLRAFLGMLKCMQGMEEVKRQFGQHIEVEPEWEAGFSIQIQLRHTLSMFQD
WCTADEELLLQGYKECYNTLMSCTNQPFKSEEIDTHMCNHVLRCKPYKVSQDPVSIHLPI
SRLLAGLYVHLCRSGAINRLHEYLPAGCDIAYMVEYPLRCLVLAAQVAAEMWRRNGLSLV
SQVYYYQDVKCRDEMFDKDIIMLQIAASKMDPNHFMILILQRFELFEFFNRSTVSRDKEL
VKQLNRLTEEMLHLLIIILGERYIPGISNVTKEDVTMREVIHLLCIESMAHSGLVKALPD
NENNETGLENVIQKVATFKKPGVSGHGVYELKKECLKEFNPFFYHYSKSQHSKAEDAQKK
RRKLENSGKALPPPEPPEFFPAFANIVNVLNCDVLIHVLRTVLRRAVETSGKLWTEAMIQ
RVLHLIGQGLLEEKQQLEANREEVAFDFSLKARRIEHGKSLLTFLEKLKLVPPLEAQKDM
ITWTLQMFEIVKCLREKSSPTAAMSIETTDPGESIQDKEKAERKRKAEAAKRHRQKIMAQ
MSAMQKNFIESHKMLYESTPQAQGPGEPFVPEDSSAMILGESRVALGPKRGSGVVEREAL
TCILCQEEQEVRADSTAMVLTACVQRSAVLTQCRGKVLPNTETFEPLFMHPDLACGTHTG
SCGHVMHAPCWQKYFEAVQNTTRNRLHAELIFDLENGEYLCPLCKSLCNTVIPLIPLQPL
KLNYDNAELVGQLLTFPRWLEIVLARIKGLKATSQANDDSHEMAENPFFMESPADFRSIL
SFGVQATARYSESINEMLVVCATAAYRVGLKVDPNETDPRVPLMSWNTCAFTIQAIENML
EEEGKPLFGSLQNRQHAGLKALVQFAAAQRLTSSQAVVQKHFTHLLSGLIPDLNVDGTSS
ILDIDLFHLLVGLVLAIPALYQEEAVDLQPSPISSAYNHLYIVQLVTMAHVVQILLSSDD
PPGMLGEEEGEEYRSATELYQTLVQCTEGLSGDVPGWCLTDRVRRGVAQFLRCAGLFFSC
LTGVPPPEVLSSNEVSLEGQLEALCSYLALPTNLFQLFQDHKDTVIPLLHRWCGNPAVST
ALNDTSSVIRYPRKRNKLVELPEDYSCLLNQACHFKCPRSADDERKHPTLCLFCGAMLCS
NSICCQETVDREVVGACAAHSVNCGAGVGMFLRIRECEVVLMGSKTRGCMYPAPYLDDYG
ETDPQLRRGNPLHLSPERYKKLYQLWQQHCIMEEIARSLEVVNVMFAFDWQML
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggtgaagaaacagctgttcggctgctgaggatgcagtggcaggactctccg
gtctgtggtcctgagctgtaccgctacctagcggagcaggtgccccggatctactgcacg
agtgagaagacgggactatccgaggaggaggaggagatggtggggaccaccttgctgcgg
cccctggagtggtatctgtttggagaggacccccagctcggcctggagaagctgcaacag
ggcagcggctcctctcagctctgtggcagagtcttcaaggagggagagaccacttacact
tgcagggactgtgctattgatcccacatgtgtgctttgcatggactgttttcaaaacagt
gttcataggaaccatcgctacaagatgcattcgtcttctgggggcggtttctgtgactgt
ggtgatatggaggcctggaaaacagggccgtcatgtaagaaacacgaacctggagcagaa
ggagatacggacatgggagcagagagccagctggaggacggcctgatggagagagcacga
atgctgttccaggtgctgttcaaatatactgttgacatgctggtgtgggaggagggacag
gagctgcctgccgagctgcagcccagtgtgaaagaagacacttattactgtgtgctgtac
aatgatgaacaccattcctatgaccatgtgatctacaccctccagaggtcagttcagtgt
gacctgggggaggcacagacccataccaacctcatagacaaagagggtcgcagagctgtg
aaaagggggactttgcaggcctgtcaggaggcaaaacaagccatccagtccaattcagaa
cacatctccctgcagcctctgcgagtggagattctgcactccgctgtcatggctcaccag
agctttgccctgcgtcttgggacctggttccagcaagttgtcaactattcagttggcttt
cggcaggtgttctgtcaagtgtccctgcaggcagcactggaccctgagctgcactgtctg
atcagcaggctcatgctgtgtgatgctaaactatataaaggagcacgaaagattgttcac
gacttgattgtctgcagtttgctgatggaaactgaatataagcgtctgtttgctattgag
tttgccaagaactacaagcagctccaggaagactttataaatgacgaccatgagagaagt
atttcggtgacagctctgtctgtccagatctttaccgtccccacgctggccaggcagctg
attgaggaggggaacgtggtcaaggtgattattgacactgtgatggagatgctgtctgag
cacctggatgacaataaccgcttccactttcaggggtacaactctgagaggtttttcagg
atacaggtggtcttccacgatctgaagtacattctgatgagtaagccaaccatctggact
gagagactccggcaacagttcctggaaggtttgagagcgtttctgggaatgctaaaatgc
atgcaggggatggaagaagtaaagaggcagtttgggcagcacatagaggtggagccggaa
tgggaagcaggcttttccattcagatccagctgagacacaccctctccatgttccaggac
tggtgcacagctgacgaagagctgctgttgcagggctacaaggaatgctacaacactttg
atgtcctgtactaatcagccattcaagagtgaagaaatagacacccacatgtgtaaccat
gttctgcgctgcaaaccatacaaagtgtcccaggatcctgttagcatccacctcccaatc
tccaggcttctggctggtctatatgtccatctttgcagaagcggtgccatcaatagattg
catgagtacctgcctgcgggctgtgacattgcctacatggtggagtacccactgcgctgt
ttggtgctggcagcacaggtagcagctgagatgtggcggcgaaatggactgtctcttgtt
agccaggtgtactactaccaggatgtaaagtgcagagatgaaatgttcgataaggacatc
attatgctacagattgctgcttctaaaatggaccccaaccattttatgatactaattcta
cagcggtttgagctgtttgagtttttcaaccggagtactgtcagcagagataaggaactt
gtcaagcagttaaaccggttgacagaggaaatgctccatcttctaatcattattttaggt
gaaagatacatccctgggatcagcaatgtgacaaaggaggatgtgacaatgagagaagtg
atccatctgctctgcattgagtccatggcacacagtggcctggtcaaagccttgcctgac
aatgaaaacaatgaaactggcctggaaaatgtcatccagaaagtagcaacatttaagaaa
cctggtgtctctgggcatggtgtatatgaactgaagaaggaatgtttaaaggagtttaac
cctttcttctaccactactccaaatcccagcacagcaaggcagaagatgcacaaaagaag
agaagaaagctggagaacagtggcaaagctctacctcctccagaaccacccgaattcttt
cctgcctttgcgaacattgtgaatgtgttgaactgtgacgttttgatccatgtgctccga
acagtgctgcggagagcagtggaaacctcagggaagctgtggactgaagccatgattcag
agggtgctccatctgattggtcaagggttgctagaggaaaagcaacagttggaggcaaac
agggaagaagtagcctttgacttcagcctcaaagcaagaagaattgaacacggcaagtct
ctcctgactttcttagaaaagctgaaattagtccctcctttggaggcgcagaaggacatg
atcacctggacgttgcagatgtttgaaatagtgaagtgtctccgggagaaatcaagccca
actgcagcaatgagtattgaaaccaccgacccaggggagagcattcaggacaaggagaaa
gcagaaaggaagaggaaggcagaagctgctaagcggcatcgacagaaaatcatggcccag
atgtctgccatgcaaaaaaacttcatagagtctcacaagatgctgtatgagagcacaccc
caggcccaggggccaggagagccttttgtacctgaggacagctctgcaatgatcctggga
gaatccagagtggctctgggcccgaaacgtggttctggagttgtggaaagagaagctctg
acctgcatcctgtgccaggaagaacaggaggtccgagcagacagcacggccatggttctg
actgcctgtgtacagagatctgctgtactgacccagtgcaggggcaaagttttacccaac
acagaaaccttcgaacctctgtttatgcacccggatctggcctgtggtacacacacagga
agctgtggacatgtcatgcatgccccctgctggcaaaagtattttgaggcagttcagaac
accaccaggaaccgccttcatgcagagctgatctttgacttggagaatggagagtacctg
tgtcccctctgcaaatccctttgcaacacagtcatccctctcattcccctgcagccactc
aaactcaactacgataatgcagagttagtgggacagcttctgacattcccccgatggctg
gagattgtcttggccaggataaaagggctaaaggccacatcacaagccaacgacgacagt
catgaaatggcagaaaatccattttttatggaaagtcctgcagattttagatctatcctg
agttttggagtccaagcaacagcacgatactcggagagcatcaatgagatgcttgttgtg
tgtgctacagctgcctacagggtggggttaaaggtcgatccaaacgagacagaccccaga
gtcccactcatgtcatggaacacatgtgccttcactatccaggcaatagaaaatatgctt
gaagaggaggggaaacctctatttggatctctgcagaatagacagcatgctggactgaag
gcactggtgcagtttgctgcagctcagagacttacctcctcacaagctgtagttcagaag
cacttcactcatctactctcaggtttgatacctgatttaaatgttgatgggacatcttca
atcctagatattgatctgtttcatcttttggtgggcctggtgcttgcgattccagcactc
taccaggaggaggcggtggacctgcagccttctcccatcagctcagcctacaaccacctc
tacatcgtccagctggtcaccatggcacacgtggtacagatcctcctctcttctgatgat
cccccagggatgctgggagaagaagagggggaggaatacagatcagcaacagagctgtac
cagaccctagtacagtgtacagaggggctcagtggtgatgttccaggctggtgtctgaca
gacagagtaaggagaggggtggcccaattcctccgctgtgccggccttttcttcagctgc
cttactggagttcccccacccgaggtgctatcaagtaatgaagtttctctcgaaggacag
ttggaggcgctgtgcagttacttggctctgcccactaacctcttccagctcttccaagac
cacaaggacactgtaattccattattgcacaggtggtgtggcaatccagcagtttcaaca
gctctaaatgatacaagttcagtgatccggtatccaaggaaacggaacaagttggtagaa
cttccagaggattacagctgccttctcaaccaggcctgtcacttcaagtgccccaggtca
gcagatgacgaaaggaagcaccccaccctgtgcctgttctgtggggccatgctgtgctcc
aatagcatatgctgccaggagactgtggatagggaggtggtgggagcctgcgcggcacac
tcagtcaactgtggagctggcgtgggaatgttcctcagaatccgggagtgtgaggtggta
ctaatgggcagtaagaccagaggctgcatgtacccagcgccttaccttgatgactatggt
gaaacagaccctcaactaaggcgaggtaaccccctacatctttctcctgagcggtacaag
aaactttaccaactttggcagcagcattgcatcatggaagaaatcgctcgcagcctggaa
gtagtcaacgtcatgtttgcttttgactggcagatgctctaa
DBGET
integrated database retrieval system
