Acipenser ruthenus (sterlet): 117963922
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Entry
117963922 CDS
T07327
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04140
Autophagy - animal
arut04148
Efferocytosis
arut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117963922
04148 Efferocytosis
117963922
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117963922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117963922
Membrane trafficking [BR:
arut04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117963922
Hops complex
117963922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-ANAPC11
zf-RING_11
DUF5600
KNOX2
DUF1664
zf-rbx1
zf-C3HC4_2
DUF4446
DUF2175
zf-C4H2
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
117963922
NCBI-ProteinID:
XP_034761680
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All DBs
Position
24:complement(10600515..10606949)
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AA seq
979 aa
AA seq
DB search
MASILDEYEDSQIIRHPSQQQHTRLSASNIGITHSGFVNARLEEEKPIFNKQRIDFSPPE
KINHFAVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDAKVHKLFLDPTGSHLLIS
LNTNECLYLNRNTQKVRSLSRWKGHLIESIGWNKLLGTETNTWPILVGTSQGQIYEAEIS
TSEGSLFSTNPDQYFRLVYTLDEDGKSAPVCCLEIERGVGSKFFIIATTRKRLFQFVGKV
PEGTEQQGFSSIFSQNADHFPSFQEFPANLGFSEIAFYTPKLRTSPRSFAWMMGNGVLYG
TLNYARPDSLLSDVQVWEYPPDIDFNFNKPISIVLTQFHFLLLLPDRVKAVCILNGQVVY
EDVFPDKFGSLKKMNKDSAGGLVWIYTEKAVFRYHIQREARDVWQMYMSMSKFDLAKEYC
KDRPECLDIVLAKEAEHCFQNKKYLESAKCYALTQNYFEEIALKFIDAKQEDALKEFLMK
KLNNLKPSEKTQITLLVTWLTELCLNRLGTLEGDESKRSIFLESREEFRKFLSSSKIKEC
LYNNRTTIYDLLASHGNVEDMVFFSVIMQDYERVISHYCQHDDYEAALEVLSKHRDEKLF
YKFSPVLMQHIPKKVVDAWIQMGKKLDSKNLIPALVNYSQIGSTEQINETIRYMEFCVYE
LAVTEEAIHNYLLSLYAKYKPESLLLYLEQTGTHSSDIHYDLKYALRLCAEHGHHKACVH
VYKIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMN
CLSSCNLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNKHIEELKQEMEEATESAKRIRE
DIQEMRNKYGVVESQEKCAACDFPLLNRPFYLFLCSHMFHYDCLLQEVSPHLSAYKHSKL
EELQKKLLTTSQPTKSRHRPKEEDTVSLGKGQLSRQQIKSDIDDIIAAECVYCGELMIKS
IDKPFIDPQKYEDEKSSWL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatacttgatgaatacgaggactctcagatcattcggcacccatcgcagcag
cagcatacccgcctttcagcatctaacattgggattacacactcaggattcgtaaatgcc
agattggaggaagagaagccgatattcaataagcagaggattgacttttctccccctgag
aagattaaccactttgcagtctgcaataaccaactttgtatgagccttgggaaagacacc
ctgctgaggattgatcttggaaagcctgatcaaccaaatcagattgaacttggacgcaag
gatgatgcaaaagtacacaagctattcttggatcctacaggttcccatctgctgatcagc
ctaaatacaaacgagtgtctgtacctgaacagaaacactcagaaggtgcggagcctctca
cgatggaagggtcatctcattgagagcattggctggaacaagctcctgggtacagagacc
aacacatggcccatcctggtgggcaccagccagggacagatctatgaagcagagatctcg
acatcagaaggaagcctattcagtaccaacccagaccagtattttagactggtctacact
ttagatgaagatggcaaatcagcccctgtttgctgtttggagattgagcggggggtcggt
tcgaagttcttcatcatagcgaccacgcggaagcgtctgttccagtttgtcgggaaagtg
ccagaaggtacagagcagcagggctttagttccattttcagccaaaacgcagaccatttc
cccagctttcaggagtttccagccaatcttggcttcagcgaaatagcgttttacaccccc
aagctgcgtacctcgccgcgatcatttgcctggatgatgggtaatggagttttatatgga
acactgaactatgcccgtcctgattctctgttaagtgatgttcaggtttgggagtatcct
ccggatatcgatttcaatttcaacaagcccatttccattgtcctgacgcaattccatttt
ctgctcttgctgcctgatcgggtgaaagctgtatgcatcttaaatgggcaggtggtttac
gaagatgtcttcccagacaagtttggttccttgaaaaagatgaacaaagactcagctggc
gggttagtgtggatttacaccgagaaagctgttttccgctaccacattcagagagaggcg
cgagatgtgtggcaaatgtacatgagcatgagcaagtttgacttggccaaagagtattgc
aaagacaggccagagtgccttgacattgtcttggccaaagaagctgagcactgcttccag
aataagaaatacctggagagtgccaagtgttatgcactgacgcaaaactattttgaagag
atcgccttaaagttcattgatgccaagcaggaggatgctttgaaagaattcctgatgaag
aaactcaacaacctgaagcccagcgagaagacacagatcaccctcctggtcacctggctt
acggaactctgcctcaacaggttgggcaccttagaaggtgacgagtcgaaacgcagcatt
ttcttggagagcagagaagagttccgcaagttcctcagcagctccaaaatcaaagaatgt
ctgtacaataacagaacgaccatttatgaccttttggccagccacggaaatgtggaagac
atggtgttcttctctgtcattatgcaggactatgagcgtgtgatctcccactattgccag
catgatgactacgaagcagccctggaggtgttgtctaagcaccgcgatgagaagctgttc
tacaagttctcaccagtcctcatgcaacacatccccaagaaggtggtagatgcctggatc
cagatggggaagaaactagactccaagaatctcatccctgctctggtcaactacagccag
attggcagtacagagcagatcaatgagaccatacgctacatggagttttgtgtatatgag
ctggctgtaacggaagaggcaatccacaactacctgctgtctctctatgccaagtacaag
ccagagtctttgcttttgtacctggagcagactggaacgcactcttcagatattcactat
gacctcaagtacgccttgcgtctgtgtgctgaacatgggcatcataaggcctgcgtgcac
gtctataagataatggaactgtatgaggaggcagtggatctggcattgcaggtagatgtg
gacctggccaaatcctgtgcagacctgccggaggatgacgaggaactgcggaagaagctg
tggctgaagattgcccgccacgtggtgcaggaggagaaggacgtgaagaaagccatgaac
tgcctctccagctgcaacctgctcaagattgaagacatcctgcccttcttcccagatttc
gtcaccattgaccacttcaaggaggccatctgcaactcgctggaggagtacaacaaacac
atcgaggagctcaagcaggagatggaagaagccaccgagagtgccaagcggattcgagag
gacatccaggagatgaggaacaagtacggtgtggtcgagtctcaggagaaatgcgctgcc
tgtgactttcccctgctcaaccgcccattttacctattcctgtgcagccacatgttccat
tatgactgcctccttcaagaggtcagcccccacctgtctgcttacaagcacagcaagctg
gaggaactccaaaagaagctgttgaccaccagccagcccaccaagtccagacatcggccg
aaagaggaggacacggtaagcctgggaaaaggccagctgagccgacagcagatcaagtca
gacattgatgacatcattgctgcagagtgcgtgtactgtggggagctgatgatcaagtct
attgataagccttttattgacccacagaagtatgaggatgaaaaatcaagctggctgtaa
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integrated database retrieval system
