Acipenser ruthenus (sterlet): 117964134
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Entry
117964134 CDS
T07327
Name
(RefSeq) TATA element modulatory factor-like
KO
K20286
TATA element modulatory factor
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117964134
Membrane trafficking [BR:
arut04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117964134
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GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
CCDC39
Motif
Other DBs
NCBI-GeneID:
117964134
NCBI-ProteinID:
XP_034762576
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Position
25:22895072..22904811
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AA seq
1132 aa
AA seq
DB search
MSWFNATHLSSFAKQAFTTAQKSIDRVLDIKEEDQWGDTVMPSYDVPGTGSSASGGWGTT
QWASPPEESTNSGSTEAITTPVTRTVVDESEHFFSAFLSSTDLQSVKNTPVVSIPPTKAH
RPKEENKEISDTPNSRQTDLVETTGKLEIKTQTVPRPENIELTKPDLDVAIDGPETELEH
PVIHETPKVCKEECVNEEKIRDNSEIKTEVSEVKLNQSVLPTSTRTKATAGNGQSVGSPP
DSPAKPHTASKDLILQSKDPKSEDRQSNTPSPPVSTFSSGTSTTSDIEVLDHDSVISESS
ASSRQESAESKASLHLMQTSFQLLSTSACSDFQRLDDYQKLTESSGSSDAFERIDSFSMQ
SLDSRSISEINSDDELPGRACTLASVTSSPPASTPLAADPDESKSEELNDTVKDRSLEEN
EMEESCRSATPVNCEEPEELVESDQANSVFCTVTNEPEQTPVHPASEEGQANQVYHNLQL
QKVIDELTIRLEKRETQILAVSKDKARLEEDYDNLKDEMINLKEECCSVQSLKEEFTQRI
ADAEKKAQLACKERDALKKEVKTLKEELSTRLNSNETAEIMKEKDEQIKGLLEEGEKLSK
QQLHNSNSIKKLRVKDKENEVLLSKQSKKIKELEEELKHLQQVLDGKEEVERQHRESIKK
LNDVVERQENELSRHLTDLEEYQETNRSLQAALDNSYKELAELHRANATKDSKAQEAALS
REIQAKEQLSVALEKAQEESRMQQEVLAMQVGDLRLALQRAEQQQGRKEDYLREEISELQ
QRLQGAETRNQELSQSVTSATRPLLRQIENLQATLGAQTTSWEKLEKNISDRLADAQAQL
AAAVEKERAATEELLTIKSQMATIESQNSLMRQEKSRLQAQLESEKSKRERLEDESSREQ
VELENVKADYTRVLEESKKQKMLLTSQLEMEKLKVEQEKKKCFLAQEALKEKERKAFVHP
ALEATTSATPTLSRSSSISGVDMASLQSSFLAQDDAFDHSFGPMTTSASGSNLYDAVRMG
AGSSVIENLQSQLKLREGEIMQLQFEISNLEKTRTVMAEELVKLTNQNDELEDQVKEIPK
LRVQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKSVYKIQIDELMKTKK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtttaatgcaactcacttgtctagttttgccaaacaggcttttacgacagct
cagaaatcaatcgacagggttttggacatcaaagaggaagaccaatggggtgacactgta
atgccttcctatgatgtacctggaacaggttcttcagcaagtggtggatggggtaccact
cagtgggcatctcccccagaagaatccacaaattctggatctacagaagcaatcacgacc
cctgtcacaaggaccgttgtggatgaatctgaacatttcttcagtgcctttttatcttca
acagacctacaaagtgtcaaaaatactccagtggtttctatacctcctacaaaagcacat
aggcccaaagaggaaaataaagaaataagtgatactccaaattctaggcagacagatttg
gttgagacaactgggaagctggaaataaaaacccaaactgtccccagacctgagaatatt
gaactaacaaagcctgatttggatgtggctattgatggaccagaaacagaacttgaacat
cctgtaatacatgaaacaccaaaagtgtgcaaggaggagtgtgttaatgaagaaaaaata
cgtgataactcagaaataaaaacagaggtttctgaagtgaaactaaaccaatctgttttg
cccactagtacaagaacaaaggcaactgctgggaatgggcaatctgttgggagtcctcca
gacagccccgcaaaaccacacacagcctcaaaagacttgatactgcagtcaaaagacccc
aaatctgaagacaggcagagcaacacgccttcacctcctgtcagcactttctcttcagga
acgtcaacaacgagcgacattgaggtgcttgaccacgacagtgtcataagcgagagctcg
gccagttcaagacaggagtctgccgaatccaaagctagcttgcatttaatgcagacgtct
tttcagcttttgtcaacttctgcctgctcagacttccagcgcctggacgactatcagaag
ctcacagagagctctggctcctcggatgcttttgagagaattgactctttcagcatgcaa
tcccttgatagccggagcattagtgaaataaactcagatgatgaattgccaggtcgagct
tgcaccttagcttcagttaccagcagcccccctgcttcaactcctctggcagctgatcca
gacgagagcaaaagcgaagaactgaacgacaccgtgaaagacaggtcactggaagagaat
gaaatggaagagagttgccgcagtgcaactcctgttaattgcgaagaacctgaagaattg
gtagagtctgatcaagcaaattcagtgttttgcacagtgactaatgagcccgaacagact
ccagtccatcctgcgagtgaggaaggccaggcaaaccaagtatatcataatctgcaattg
caaaaggttattgatgagctgacgatcagacttgaaaagagagaaacacagatattagct
gtcagtaaagacaaagcaagactggaagaagactatgacaatcttaaagatgagatgata
aacctgaaggaggaatgctgcagtgttcagtctcttaaagaagagtttacccagcgaatt
gctgatgctgaaaagaaagcacagttagcctgcaaagagagggatgctttaaagaaggaa
gtgaaaacacttaaagaggaactgtccacaagacttaattcaaatgagaccgctgaaatt
atgaaggagaaggatgagcaaatcaagggtctgcttgaagaaggtgaaaaactttccaaa
cagcaacttcacaattccaacagcataaagaagctgagagtgaaggacaaagaaaacgaa
gtcctgctttcgaaacaaagcaaaaagatcaaggagttagaagaggagctgaagcatttg
cagcaggtgttggatggcaaagaggaagtggaaaggcagcaccgtgaaagcattaagaag
ttgaacgatgtggtcgagaggcaggagaacgagctgagcaggcacctgacagacctggag
gagtatcaggagacaaaccgcagcctccaggcggctctggataattcctacaaggagctt
gcagagttgcacagagcaaatgctacaaaggacagtaaagctcaggaggctgcacttagc
cgggagatacaggccaaggagcaattgagtgtggcactggagaaggcccaggaagaatca
agaatgcaacaggaggtgttagcaatgcaggtaggagacctgaggttggctttgcagaga
gcagagcagcagcaaggtagaaaggaggattacctccgtgaagagatcagtgaattacag
cagagacttcaaggagcagaaactcgtaaccaagaactgagccagagtgttacatcagca
acaagaccattgcttcgacagattgaaaacctacaggcaacgctgggggcacaaaccacc
tcctgggagaaactggagaagaacatctcagatagacttgctgatgctcaagcacagctg
gcagctgcagtggagaaagagcgtgctgctacagaagagcttcttacaataaaatcccag
atggcaactatagagtcccagaacagcctcatgcgccaagagaagagccgcctgcaggct
cagctggagtcagagaaatccaaacgagagagactggaggatgaaagcagcagggagcag
gtagagttggaaaatgtgaaggctgactacacgagagtgctggaggaatctaaaaagcaa
aagatgcttctaacaagtcagttagaaatggagaaactgaaggttgagcaagaaaagaag
aaatgttttctagctcaagaagcattaaaggaaaaggaaagaaaagcctttgttcatcct
gccctggaagcaactacttcagcaactccaaccttatcccggtcgagctctatcagtggg
gttgatatggcaagcttacaatcgtccttccttgcacaggatgatgcctttgatcactca
tttggaccaatgaccacatctgctagtggaagtaatctttatgatgctgttcggatgggg
gcaggatccagcgttattgaaaacctgcagtctcagctgaagctacgggaaggggagata
atgcagcttcagtttgaaatttcaaacctagaaaaaacacggacagtaatggcagaggag
ttggtgaaattaaccaatcaaaatgatgaacttgaagatcaggtgaaggaaattcccaag
ctgcgtgtccagctaagggacttggaccagagatacaacaccattttacagatgtatggt
gagaaagcagaagaagcagaggaacttcgacttgacctagaagatgtaaagagtgtgtac
aaaatccaaatagatgaacttatgaaaacaaagaaataa
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