Acipenser ruthenus (sterlet): 117964389
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Entry
117964389 CDS
T07327
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117964389
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117964389
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
117964389
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
117964389
NCBI-ProteinID:
XP_034763592
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All DBs
Position
28:21664903..21672489
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AA seq
618 aa
AA seq
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MAARMQKAAHDIQSRRRTDDVLQSEGLDFSSLLLSQPVLLGLAASGFQRPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFTTIALDSLIVENPATQVLVLAPTREIAVQIHSVITAIGI
EIEGLQCHVFIGGTPVSLDRTRLKKCHIAVGSPGRVKQLIEMGYLATASIRLFVLDEADK
LLEEGSFQDQINWIYSSLPVNKQMLALSATYPESLAQHLARYMRDPTFVRLNPSDPGLLG
LKQYYKIVKSHPLPHKIFQEKVQHLLDLFSKIPFNQALVFSNLHSRAQRLADILTSKGLP
AVCISGSLTQDQRLEAMSKLKQYKCRVLISTDLTSRGIDAEKVNLVINLDVPQHWETYMH
RIGRAGRFGTHGLAVTYCCHGEEENEMMTIAQKCSLNLSCLPDPLPTRINGRNPLTGMLP
LKVSRPYRIDLQPPPSSWSIGTKDFRSKTDPTPRKPVNVSVLRSVSTSQTTPRELREKPQ
SLSIQDQAALQDALPKISPLPSFKAKPHCMRPMSLAELAEDYESFIKDGPGRTVEIIRRY
TGLNDAGQQTVEEVKVEGGVEQGVPQAVSRDCERESSFNARLSSHISDRSTSEDGEDSRG
LAGEDSRGLAGEDSGAWP
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgcatgcagaaggctgctcatgatatccagtcccggagacgcaccgatgat
gttttgcagtccgaggggctggatttcagctcgctgctgctgtctcagcctgtcctgttg
ggtctcgccgcttcgggcttccagaggccgtccccgatacagctgaaggccattccgctg
gggagatgcgggctcgatcttattgtacaggccaagtcaggcacggggaagacgtgtgtg
tttaccaccatcgctctggattccttgattgtggagaatccagcgacacaggtcctggtc
ctcgcccccaccagagagatcgcggtgcagatccattctgtcatcacggccatcggcatt
gagatcgagggcttgcagtgccatgtgttcataggagggacccctgtgagtctggacagg
accaggctgaaaaaatgtcacattgctgtcggctcaccaggtcgcgtaaagcagctcatt
gagatgggctatctcgccacagccagtatccgcttgtttgttctggatgaagctgacaaa
ctgctggaggaaggcagctttcaagaccaaatcaactggatctattcatccctccctgtg
aataagcagatgctggctctctctgccacgtaccccgagtccctggcacagcacctcgcc
cgctacatgagggaccccaccttcgtacgcctgaaccccagtgacccggggctgctagga
ctgaagcagtattacaaaatagtgaaatcccacccgctgcctcataagatcttccaagag
aaagtgcagcatcttctggatctcttcagcaagataccgttcaaccaggctctggtcttc
tccaacttacacagcagggctcagcgcttggccgatattctcacttcaaaaggcctccct
gctgtgtgcatttcaggcagtctgactcaggaccagagactggaagccatgtcgaaactg
aagcagtataagtgcagagtcctcatctctacagacctgacgtcccgagggatcgatgca
gagaaagtgaacctggtgattaacctggacgtgccgcagcactgggagacgtacatgcac
cgcatcggaagagccggccgcttcggcactcatggcttggcagtgacgtactgttgccat
ggcgaggaggagaatgaaatgatgaccattgctcagaagtgcagtctgaacctctcttgc
ttgccagatcctctccccaccaggattaatggaagaaaccctctgactgggatgttacca
ttgaaagtgtccagaccttaccggatagacctgcagcctcccccaagctcatggagtatc
ggaaccaaggacttcagatcaaagacagatcccacccccagaaagcctgtcaacgtctcc
gtgctgagaagcgtttccacctctcaaacaacccccagggagctccgagagaaaccgcag
agcctctccatccaggaccaggcagctctgcaagatgccttgcctaaaatctctccgctg
ccctctttcaaagccaagccccactgcatgagacccatgagccttgcagagctggctgaa
gattacgaaagctttataaaagatgggcccgggagaacagtggagattatcagacgatat
actggtttgaatgacgctggccagcagactgttgaagaagtcaaggtggaaggtggtgta
gagcaaggggttccacaggctgtttctagggactgcgagagggagagcagcttcaacgct
cggcttagtagtcatattagtgacaggagcacctctgaggacggtgaggattccaggggc
ctggccggtgaggattccaggggcttggccggtgaggattcaggggcgtggccg
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