Acipenser ruthenus (sterlet): 117964481
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Entry
117964481 CDS
T07327
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117964481
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Mo-co_dimer
Motif
Other DBs
NCBI-GeneID:
117964481
NCBI-ProteinID:
XP_034763958
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Position
28:20009133..20028643
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AA seq
826 aa
AA seq
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MTLVLNCGVLVLVSIFTLSCGLDAPDRANPVGSSFVKTRRKMLNVLDGAVIEGSVPDPSA
LHRYSKVNKRSTELEDTCNDWRGFEARLTNNTHPFPFFDLSGSVSLAWVGDGTGVVLALT
TFQVPLLLVKFGQSKLYRSENYGKSFSDVSGLINNTFIRTEFGIAIGPENSGKVILTGDV
SGGSAGGRIFRSLDFGNRFSRTDLPFHPLTQITYNPRNASQLLVLGINYALWLSLDFGET
WRMMHDTVCLVKWGPKNTIFFTTYPNGSCIDRGMLELRKTSDFGRSFRTIGTKIYSFGLG
GKFIFASVMTGSGTIRVIHVSVDQGESWNMAQLPPVGHEQFYSILAANDDMVFMHVDEPG
DTGFGTIFVSDDRGIVYSKSLERHLYTMTSGDTDFTNVTSLRGVYMTSVLAEGGSVQTVI
TFDQGGEWMPIRKPENSQCDSTARNKEMCSLHIHASYSISQKLNVPMLPLSEPNAVGLII
AHGSVGDAISVMTPDVYVSDDGGYSWIKALVGPHHYAILDSGGLIVAVEHSPSQPIKHIK
FSTDEGQCWYRYNFTTDPLYFTGLASEPGARSMNVSVWGYRETLITQYWVSITIDFNELL
TRDCDEKDYVQWLAHSNDLSDPNDGCMLGYKEQFLRLRKASVCWNGRDYVVNKQPSTCPC
TLDDFLCDFGYFRPENRSECLEQPDLKGHDLEFCLHGTEELLQTSGYRKIPGDRCESGTQ
PERKVIDLRKKCVSNLLDPAQLATTPSTSPAPIVAAVIGVLAITIIAGVLLVKKYVCGGR
FLVHRYSVLQQHAEANGIDGVDELETNSAHSSKRDYHDDSDEDLLE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgactctcgtgttaaactgcggtgttttggtgctagttagcattttcaccctttcgtgc
gggctcgatgcccccgatagagccaaccccgtcggctcatcgtttgtgaagactaggagg
aaaatgctgaatgttttggacggtgctgttatcgagggctcggtgccggacccctccgct
ctgcaccgctacagtaaagttaacaaacggagcacggagcttgaagatacctgtaacgac
tggagagggtttgaagccaggctcactaacaacacgcacccgtttccgttcttcgacttg
agtggctcggtgtcgctggcctgggtgggcgatgggactggagtagtcctggcattgact
acgttccaggtgcctttactgctggtgaaatttggccagtccaaactctacagaagtgag
aattacgggaagtcgttctcggatgtcagcggcctcattaacaacaccttcatccggacc
gagttcgggatcgccatcggcccggagaactccggcaaggtgatcctcacgggagatgtg
tcgggagggagcgcaggaggcaggattttccggtctctggatttcgggaacagattttcc
cgtacggatctgcctttccaccccctgacgcagataacctacaaccccaggaacgccagt
cagctgctggtcctcggcatcaactatgccctgtggctctccctcgactttggggagacc
tggagaatgatgcacgacactgtctgccttgtgaaatggggtcctaagaacacaatcttc
ttcaccacctaccccaatggatcatgcatcgatcgggggatgctggagctcaggaagacg
tccgattttgggaggtccttccggacgatcggcaccaagatctactccttcggtctgggc
ggcaaatttatcttcgcgtccgtcatgactggatcgggcactatacgggtgatccacgtg
tctgtggatcagggggagtcgtggaacatggcccagctgccccctgtgggccacgagcag
ttctactccatcctggcagccaatgatgacatggtgttcatgcacgtggacgagccaggg
gacaccggttttggcacgatcttcgtctcggacgatcgaggaatcgtttactccaagtcc
ctggagagacacctttacacgatgacgagcggggacacggacttcaccaacgtgacctct
ctgcggggggtctacatgaccagcgtcctggctgaaggcggctcagtgcagacggtcatc
acgtttgaccagggaggagagtggatgcccattcgaaagccagagaacagccagtgcgac
tccacagccaggaacaaggagatgtgcagcctccatatccacgcctcctacagcatctct
cagaaactcaacgttcccatgctgcccctgtccgagcccaacgctgtgggcctgatcatc
gctcacggcagcgtgggggatgcgatctctgtgatgacccccgatgtgtacgtgtccgat
gatggagggtactcctggatcaaggctctggtgggaccccatcactacgccattctggac
tctggggggctcatcgtggctgtggagcacagcccctcccagcccatcaaacacatcaag
ttctccacagacgaggggcagtgctggtaccggtataacttcaccactgacccgctgtac
ttcacgggcctggcgtctgagcctggggcccggtccatgaacgtcagcgtgtgggggtac
cgggagactctgatcacacagtactgggtctccatcaccatcgacttcaatgagctgctc
acccgcgactgtgacgagaaggactacgtccagtggctggctcactccaatgacctgagc
gaccccaacgacggctgcatgctggggtacaaggagcagttcctgaggctccgcaaggcc
tccgtctgctggaacggcagggactacgttgtgaacaagcagcccagcacctgcccctgc
accctggacgacttcctctgtgactttggatacttccgtccggaaaaccgctcggaatgc
ctggagcagccggatcttaaaggtcacgacctggaattctgcctacacgggacggaggag
cttctccagaccagcggctaccgtaagattccgggggacaggtgtgaaagcgggacgcag
ccggagaggaaggtgatcgatctccgtaagaagtgtgtgagcaacctgctggaccctgca
cagctggctaccacaccctccaccagtcctgccccgattgtggctgcagtaatcggggtg
ctggcgataacgatcatagctggggtcctccttgtgaagaaatacgtctgcggtgggagg
ttcctggtgcaccggtactccgtcctgcagcagcacgcagaggccaatgggatcgacggg
gtggatgagctggagactaactccgcccactccagcaaacgcgactatcacgatgactcg
gacgaggatctcctcgagtga
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