Acipenser ruthenus (sterlet): 117964511
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Entry
117964511 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM33-like
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arut01001
]
117964511
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117964511
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117964511
Protein kinases [BR:
arut01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
117964511
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117964511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
PHD-1st_NSD
zf-RING_UBOX
zf-RING_5
EOS1
Motif
Other DBs
NCBI-GeneID:
117964511
NCBI-ProteinID:
XP_034764186
LinkDB
All DBs
Position
28:20877731..20898824
Genome browser
AA seq
1179 aa
AA seq
DB search
MAENKGGGDGESPENNKPALAEEDTPTPAEKEHESPVTSELSANGAEAQSPENNDQAPSG
GGGGGGEDTASGNGSPENGEPPGSGEPEEVSARETEEVSAQDTDVVCIEVVPAPAPAPPA
TTPASTPAPSTAESPSPVPTAPAAPPAPALPINLLDTCTVCRQSLQNRDCEPKLLPCLHS
FCLRCIPQPERQLSLQLPGPHGQEIQIVNVMRCPVCRQEFKQTDLVDNYFVKDTSEVSSR
SDENSAQVCTSCDDNACAVGFCVECGEWLCKTCIEAHQRVKFTKDHVIRRKDDVSAEPVG
TSGQRAVFCPIHKQEALKLFCETCDRLTCRDCQLQEHKEHRYQFLEEAFQNQKGIIETFM
AKLQEKKNYVHFASSQVQSRIKEVNETHKKVEHEIKVAVFTLINEINKKGKSLLQQLESV
TKERNMKLMHQQRDITSLSQQIMHVLGFANWAICSGSSTALLYSKRLITFQLRHILKARC
DPVPSANGAVRFFCDPTFWAKNVVNLGNLVIETKPIPVHAPNVVVGQVPNAQNHAGKHLG
QINLAQLRLQHMQQQQQQAAYAQKQQQQQQQLQLQQQQMQQQQMQQQQQQQQQQQQLRMV
QHLPPHPRQGGPQMVQQQQPPRLISMQAMQRAGINGAAYQAHQMRLAQSQNQNRMPGVPR
HNGQQYPMMQPQLQRQHSNPGHAGPFPVASLHNSATNPTSPTTASMAHAHRGPTSPCVST
IELIPSVTNPENLPCLPDIPPIQLEDAGSSSLDNLLSRYIFASQLPPAPPTNMIPSPGPS
ALSPGSAGISNSHTPVRPSSTSSTGSRGSCSSGRTMSGVDAVKVKQEPGTEEECGFSGAV
VKQERVEDGRRSACMMSSPESSRTPPLAAPSSTPQEPAPLRTLEEHVKEEPKETTGSCRQ
QVETTVTNGKGSVRSFLHRPPRAATAATHSSEHKDDDPNEDWCAVCQNGGDLLCCDKCPK
VFHLTCHVPTLLSFPSGEWICTFCRNLAKPEVEYNCDNLQHRKKGKTVHGLSPTDQRKCE
RLLLYIFCHELSVEFHEPVSASIPNYYKIIKKPMELTTVKKKLQMKHSQHYQTPQDFVAD
VRLIFKNCAKYNEMSRIIQVYDEKTQINLQAESEVAQAGKAVALYFEEKLKEIYGDQNFP
PHPDTEPEEDEEVTEDSDDDFVQPRRKRLKSEEKPLHIK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacaaaggcggaggggacggcgagagccccgaaaataacaaaccagctctg
gctgaagaggatacccctaccccggccgagaaagaacacgagagcccggtgactagtgag
ctttcagcgaacggagcggaggcccaaagcccggagaataacgaccaggctccgagtgga
ggaggaggaggaggaggggaggacaccgccagcggtaatggcagcccggagaacggagaa
cccccgggctcaggcgagcccgaggaggtgtctgcccgggagaccgaggaggtgtctgcc
caggacactgacgtggtgtgtattgaggtggtgccagctccggcccctgctcctcctgcg
actactccagcgagtactccggcccccagcaccgcggagtctccctctcccgtccccaca
gctccggcggctcctccggccccggctctcccgatcaacctgctggatacctgcacggtg
tgcagacagagcttgcagaatcgggactgcgagcccaaactgctgccgtgcctgcattcg
ttctgtctgcgctgcatcccgcaacccgaacgacagctcagcttgcagctaccgggcccg
cacggacaggagattcagatcgtgaacgtgatgcgctgcccagtgtgccggcaggagttc
aagcagaccgacctggtagataattactttgtgaaagatacctcggaggtctccagccgc
tcagatgagaattcggcgcaggtgtgtacgagctgtgacgacaatgcttgcgccgtgggc
ttctgtgtggagtgcggggagtggctttgcaaaacctgcatcgaggcccatcagagagtc
aagttcaccaaggaccatgtgatcaggaggaaagatgacgtctctgctgaaccagtggga
acctcaggacagcgggctgtgttctgcccaatccacaagcaggaagctctgaagctgttc
tgtgagacctgtgaccggctgacctgcagagactgtcagctgcaggagcacaaggagcac
agataccagtttttggaggaagcttttcagaaccaaaaagggataatcgagaccttcatg
gctaagcttcaggagaagaagaattacgttcactttgcttcctctcaggtgcagagcagg
ataaaggaagttaacgaaactcataagaaagtggaacatgaaatcaaagtggctgttttc
accctcatcaatgaaatcaacaaaaagggaaaatcactattgcagcagttggagagtgtg
acaaaggagcgcaatatgaagctgatgcaccagcagcgtgacatcaccagcctgtcccag
cagatcatgcacgtgctgggcttcgccaactgggccatctgcagcgggagcagcactgcc
cttctctacagcaagagactgataacgttccagctgcggcacattctgaaggctcgatgt
gaccccgtcccttcggcgaatggagctgttcgcttcttctgtgaccccaccttctgggca
aagaacgtcgtcaatctgggtaacctggtgatcgagaccaaaccaattcccgtccacgcc
ccgaacgtggtagtgggtcaggttcctaatgcgcagaaccacgcagggaagcacctgggg
cagatcaacctggctcagctgcggctccagcacatgcagcagcaacagcagcaggctgcc
tatgcgcagaagcagcaacaacagcaacagcagttacagctccagcagcaacagatgcag
cagcaacaaatgcaacagcagcagcaacagcaacagcaacagcagcagctgcgcatggtg
cagcacttgcctccacacccacggcagggggggccacagatggtccagcagcagcagcct
ccccggctgatcagcatgcaagccatgcagagagccgggattaatggagccgcctaccag
gcacaccagatgcgactggcccagagccagaaccagaaccgcatgccaggcgtcccgcgg
cacaacggccagcagtaccccatgatgcagccgcagctccagagacagcattccaaccca
ggccatgccggcccattccctgtcgcttcactccacaacagcgctaccaacccaaccagc
cccaccaccgccagcatggcccacgcccaccgcggtccaaccagcccctgtgtgtccacc
atcgagctcatcccctctgtgaccaaccctgagaacctgccctgcctgccggacatcccg
cccatacagctggaagatgctggctcgagtagtctagacaatctcctgagcagatacatc
ttcgccagccaacttcctccagctcccccaaccaatatgatcccgtctcccggaccctcc
gctctgtctccagggtctgcagggatttctaattcacacacaccagtgaggccctccagt
acctccagcacagggagcagaggcagctgttcgtctgggcggaccatgtcaggggtggac
gcggtgaaggtcaagcaggagccggggacggaggaggagtgtggcttttcgggggcggtg
gtcaagcaagagcgggttgaggacggccgcaggagcgcctgcatgatgagcagtccggag
agcagccggactcccccgctggctgccccatcctcaaccccccaggagccggcccctctg
cggaccctggaggagcatgtcaaggaggagcccaaggagacgacggggagctgccggcag
caggtggagaccactgtgacgaacgggaagggctccgtgcgcagcttcctgcaccgccct
ccccgtgccgccacggccgccacacacagcagcgagcacaaggatgacgaccccaacgag
gactggtgcgccgtgtgtcagaacgggggcgacctgctctgctgcgacaagtgccccaaa
gtctttcacctcacctgccacgttcctacgctgctcagctttcccagcggagagtggatc
tgtaccttctgcagaaacctggccaaacctgaggtcgagtacaattgtgacaatctgcag
cacagaaagaaggggaaaaccgtgcacgggctcagccctacagaccagaggaagtgtgag
cgtctcctcctttatatcttctgtcatgagctgagtgtcgagttccacgaaccagtctcc
gcttctatacccaattactacaagatcattaagaagcctatggaactgaccacggtaaag
aagaaactccagatgaaacactcacaacactaccagactccgcaggactttgtggccgac
gtccgcttgatcttcaagaactgtgcaaaatacaatgaaatgtctcgaattatccaagtt
tatgatgagaaaacccagattaatttgcaggctgaatctgaggtggcgcaggctggcaaa
gcggtcgcgttgtacttcgaggagaaactcaaggagatttatggggatcagaacttccct
ccccacccagacaccgagccggaggaagacgaggaagtcacagaagattccgacgacgat
tttgtccagccgaggcgcaaacgattaaaatcggaagagaagccgctacacatcaaatga
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integrated database retrieval system
