Acipenser ruthenus (sterlet): 117964577
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Entry
117964577 CDS
T07327
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117964577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117964577
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117964577
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117964577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
117964577
NCBI-ProteinID:
XP_034764356
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All DBs
Position
29:390576..395229
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AA seq
285 aa
AA seq
DB search
MPAALADTSKIICEVWASNLEEEMRKIRQIIQSFNFIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGINTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDTRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQSQNGIANSSQEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcgctagcagataccagcaagatcatctgtgaagtttgggccagcaatctg
gaggaggaaatgaggaaaatccgacagattattcagagcttcaacttcattgccatggac
acagagttcccaggagttgtggtgaggccgattggtgagtttcgcagtacagtggattac
cagtatcagctcctgcggtgtaacgtggacctgctgaagatcatccagctcggactgacc
ttcatgaatgaagacggggactacccacctggaacaaccacctggcagtttaacttcaag
ttcaacctgacagaggacatgtactcccaggactccatcgatctgctgcagaactctgga
ctgcagttcaagaaacacgaggaagaaggaattaatactctctactttgccgagctcctc
atgacatctggtttagtgctgtgtgaaaatgtcaagtggctctcctttcacagcggctat
gactttggctacttggtgaagcttctcactgacaccaggctgcctgaggaggagcacgaa
ttctttcagatactcaacctcttctttcctgcgatctatgatgtgaagtacctcatgaag
agctgtaagaacctcaaggggggtcttcaggaagttgctgatcagctggagttgaagagg
ataggcaggcagcaccaggctggctcggactcgctgctcactgggatggcgttcttcaga
atgaaagagttgttttttgaagataacatcgatgatgcgaagtactgcgggcggctgtac
ggcttggggtctggatccacccagagtcagaacggaattgcaaactcctctcaagaagaa
acgaacaacaaacactga
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