KEGG   Acipenser ruthenus (sterlet): 117964622
Entry
117964622         CDS       T07327                                 
Name
(RefSeq) protocadherin-12-like isoform X1
  KO
K16499  protocadherin delta 2
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:arut04515]
    117964622
Cell adhesion molecules [BR:arut04515]
 Cadherins
  Protocadherins
   117964622
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 117964622
NCBI-ProteinID: XP_034764649
LinkDB
Position
29:complement(11103299..11110548)
AA seq 1208 aa
MVKAAQLPILLLCFLHTVCCLDSVPPTIQYKVLEEVPTGTLIGKIADDLSLEGENEALED
FQIVEPVRALPFRVGLQDGTLSTADRLDRDALCWDTSPCLIPFNILYRKGWTIELLQLQV
EVLDINDHSPTFPNLEQEIEISESASLHTTIPLDRALDPDAGTNALHTYSLSPNQHFELD
VITLSEGTKHGQLVVIKALDREVQSSCEMFLTACDKGNPPKCGTMLVRVNVLDSNDNSPV
FERSLFSVELKEDTMPGTTIINLQATDPDQGANGEIEYSFSKHVPLEVLSIFNINPQTGT
VTLTGVLDYEKRHTYELDIQAKDLGPNPIPAHCKLHIKVLDVNDNAPKIHVMWAPPDSDV
AMVSEGAATETFLALVMVSDADSGFNGNIQCQVHHGLGHFRLKRTHGDNYMVVTNATLDR
ERQEKYNLTLVAKDQGIPSFSLTKHLTVHVMDENDNAPVFSKSLYEVSFQENNPHGLYIL
TVKAHDVDLGLSGNVTYSIKDSTKPGKPAASFIIHPTDGMIYAQQSLDFEQTKGLTLIVE
ATDNGQPPLSSSASVLINIQDVNDNHPLIVDPVLKNHRAALSIPVNTEKREIVSEVEDAA
SEHRDTLTNYLLELFPKSNDSAAKLKPDGYLVTTVKAWDADAGLNGELRYEIASRDSLFA
IDEVTGQIYVNTSNVTELIGKVFVVEVTVRDLGSPPLSTRASLELTFLSLFDHLKNSSPG
QHGLLSFPLTIALCLGALCLMVALAAALVTTFCRNEKRENRAYNCRQAESTYTRHPRRPQ
KQIQKADIHLVPVLRGRQGEPAGGEPGRPPSAGSTTTLDALEAFPPCQFNLSPSLSRTLR
NQTFPENNSTLPLSPPRTLRKPHNIEESGTLPRTPATPYRTLKKPKNMEFHQIEGPTAQL
QASLPYTGTLKLPGKAAVQHSAQEEPDSAPASPPFRTLRRQRNTDSKSRPEKDDHQQILR
NLVRISMAALAEYNPIELTAASPEVQQVSQLLSLLHRGQFQPKPNFRGNKYSARAGRSGV
QDADWQSTKDSGHGESEAGDMDWETGQDSPIDPLLVEELDNLLTQTDDVFMDLPDPAWMA
RLSLPLTTDYRENVFVPEGLPSPETPALLPAADGAASFSTFGKASGEISQISGHLLSEVS
TLFEMLLTQKADSHPRTSAEVLYRLSAAYRRSLGLEGGATGGGNFPRDSPKTQDKADPSR
DVEIHQLV
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggttaaagctgctcagctgcccatattgcttctgtgcttcctgcatactgtttgctgt
ttggattctgttcctcctacaattcaatacaaagttttggaggaagtgcccactgggaca
ttgattggaaagattgctgatgatctgagcctggaaggtgagaatgaagcactggaggat
tttcaaattgttgagccagttcgggctttgccattccgggttggactacaagatgggact
ctttccactgcagatcgcctggatagagatgccctttgctgggataccagcccttgtttg
attccttttaatatactgtataggaaaggatggaccattgagcttttgcagttacaggtg
gaagtcttggatataaatgatcacagtccgacttttccaaacttggagcaggaaattgag
atttcagagagcgcctcactgcacaccacaataccattggatagggcgctggatccggat
gctggtaccaatgctctgcatacttattccttatcccctaaccagcattttgaattagat
gtcatcaccctgtcggaaggaaccaaacatgggcagcttgtggtcatcaaagcactggac
agggaggttcagtcttcctgtgaaatgtttctgacagcctgtgataaaggaaatccacca
aaatgtgggaccatgctggtaagggttaatgttttggattccaatgataacagcccagtt
tttgagcgcagcttgttttccgttgagctaaaggaagacacgatgccagggaccaccatc
atcaatcttcaggccaccgatcctgatcaaggggccaatggagaaattgagtattccttt
agcaagcatgtccctttagaagtactgagcatcttcaatattaacccccaaacaggaaca
gtgactctaacaggagttttggactatgagaaaagacatacttatgagcttgacatccaa
gccaaggatttggggcccaatcccatccctgcccattgcaaactccatatcaaagtcctg
gatgttaatgataatgcacccaagatacatgtcatgtgggctccaccagattctgatgtt
gccatggtttctgagggtgctgctactgaaaccttccttgccctagtgatggtatctgat
gctgactctgggttcaatgggaacatccagtgccaagtccatcatgggctgggtcatttc
cggctgaagaggacccacggagacaactatatggtagtgaccaacgccaccttggatagg
gagaggcaggagaagtacaacctcactctggtggccaaggaccaaggcatcccatccttc
tctttgacaaagcacctcaccgtacatgtaatggatgaaaatgacaatgcacctgtcttc
tcaaagagtctttatgaggtttctttccaggagaacaatccccatggcctctacattctt
acggtcaaagctcacgatgttgacctgggcctcagtgggaatgtcacttactcaatcaag
gattccacaaaaccaggaaaaccagctgcctcttttatcatccatcccacagatggtatg
atctacgctcagcagtcattagattttgagcagacaaaaggtcttacactaatagtggag
gcaacagacaatgggcaaccaccactgtctagcagcgcttctgtcttaataaatatccaa
gatgtcaatgataaccatcctttgattgtggacccagtgctgaagaaccacagggcagca
cttagcatccctgttaacacagagaagagagagatagtcagtgaggtggaagatgctgct
agtgaacacagagacacactaactaattacctcctcgagctttttccaaagagtaacgac
tctgcagcaaaactgaaaccagatggatacctagtaaccactgtcaaagcctgggatgct
gatgcaggcctaaatggagagctccgctatgagatagcaagtagggatagtttgtttgca
atagatgaagtgactggacagatttatgttaataccagcaatgttacagagctgattgga
aaagtgtttgtagtagaggtcactgttcgggacttgggttctccaccactctccactcga
gcttctttggaattgacttttctcagtctctttgaccatctcaaaaactcttctcctggc
cagcatggactactgagctttcccctgactatagccctctgccttggggccttatgtctt
atggttgccttggcagcagccttggtgaccactttctgtcggaatgagaaacgtgaaaac
cgggcttacaactgcaggcaggctgagtccacttacaccaggcatcctaggcgtccacag
aaacagatccaaaaagcagacatacacttagttcctgtgttgagagggaggcagggagag
ccagctgggggagagcctggcagacccccttcagctgggtcaacaacaactttggatgcc
ctggaagcctttcctccttgtcagttcaacctgtctccatccctcagcaggactctcagg
aaccaaactttcccagaaaacaacagcactctccccctatcccctccgagaactctccgc
aaaccacacaacattgaggagagtgggactcttcctcgtaccccggctaccccctatagg
actctcaaaaagcccaagaatatggagttccaccaaatagagggccccacagctcagcta
caggcatctctgccctatacagggacactgaagctgccaggaaaggctgcagtccagcac
agtgcacaggaagaaccagactcagcccctgcctctcccccatttcggacactcaggagg
cagaggaacacagactccaagtcgaggccagagaaagacgaccaccaacagatcttgagg
aatctggtccggatctccatggcagccttagcagagtacaaccccattgaactcactgca
gcgtccccagaggtacagcaagtctcccagctgctctccttactacaccggggccagttc
cagccaaaacccaacttccgggggaataagtactcggccagagctggcaggtctggtgta
caggatgctgactggcagagtaccaaggacagtggtcatggtgagagtgaggctggagat
atggactgggaaactgggcaggactctcccattgaccccctgctggtggaagagctagat
aacctgctgactcagacagatgatgtgtttatggacctccctgatccagcctggatggct
cgcttgtctttgccgcttaccacagactatagggagaacgtctttgtccctgaaggactc
ccttccccggagacccctgctcttctcccagctgctgatggagctgcctccttctccacc
ttcgggaaggcctctggcgagatttcacagatctctgggcacctcctctcagaggtcagc
accctctttgagatgctgctcactcagaaggcggactctcaccccaggacttctgctgaa
gtgctgtacagactctccgctgcctaccgccgctccctgggtttggaagggggagcaaca
gggggtggcaactttcctagagactcccccaaaacacaagataaagctgacccctcaaga
gatgtggagatccatcaattagtctga

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