Acipenser ruthenus (sterlet): 117964622
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Entry
117964622 CDS
T07327
Name
(RefSeq) protocadherin-12-like isoform X1
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117964622
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117964622
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
117964622
NCBI-ProteinID:
XP_034764649
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Position
29:complement(11103299..11110548)
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AA seq
1208 aa
AA seq
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MVKAAQLPILLLCFLHTVCCLDSVPPTIQYKVLEEVPTGTLIGKIADDLSLEGENEALED
FQIVEPVRALPFRVGLQDGTLSTADRLDRDALCWDTSPCLIPFNILYRKGWTIELLQLQV
EVLDINDHSPTFPNLEQEIEISESASLHTTIPLDRALDPDAGTNALHTYSLSPNQHFELD
VITLSEGTKHGQLVVIKALDREVQSSCEMFLTACDKGNPPKCGTMLVRVNVLDSNDNSPV
FERSLFSVELKEDTMPGTTIINLQATDPDQGANGEIEYSFSKHVPLEVLSIFNINPQTGT
VTLTGVLDYEKRHTYELDIQAKDLGPNPIPAHCKLHIKVLDVNDNAPKIHVMWAPPDSDV
AMVSEGAATETFLALVMVSDADSGFNGNIQCQVHHGLGHFRLKRTHGDNYMVVTNATLDR
ERQEKYNLTLVAKDQGIPSFSLTKHLTVHVMDENDNAPVFSKSLYEVSFQENNPHGLYIL
TVKAHDVDLGLSGNVTYSIKDSTKPGKPAASFIIHPTDGMIYAQQSLDFEQTKGLTLIVE
ATDNGQPPLSSSASVLINIQDVNDNHPLIVDPVLKNHRAALSIPVNTEKREIVSEVEDAA
SEHRDTLTNYLLELFPKSNDSAAKLKPDGYLVTTVKAWDADAGLNGELRYEIASRDSLFA
IDEVTGQIYVNTSNVTELIGKVFVVEVTVRDLGSPPLSTRASLELTFLSLFDHLKNSSPG
QHGLLSFPLTIALCLGALCLMVALAAALVTTFCRNEKRENRAYNCRQAESTYTRHPRRPQ
KQIQKADIHLVPVLRGRQGEPAGGEPGRPPSAGSTTTLDALEAFPPCQFNLSPSLSRTLR
NQTFPENNSTLPLSPPRTLRKPHNIEESGTLPRTPATPYRTLKKPKNMEFHQIEGPTAQL
QASLPYTGTLKLPGKAAVQHSAQEEPDSAPASPPFRTLRRQRNTDSKSRPEKDDHQQILR
NLVRISMAALAEYNPIELTAASPEVQQVSQLLSLLHRGQFQPKPNFRGNKYSARAGRSGV
QDADWQSTKDSGHGESEAGDMDWETGQDSPIDPLLVEELDNLLTQTDDVFMDLPDPAWMA
RLSLPLTTDYRENVFVPEGLPSPETPALLPAADGAASFSTFGKASGEISQISGHLLSEVS
TLFEMLLTQKADSHPRTSAEVLYRLSAAYRRSLGLEGGATGGGNFPRDSPKTQDKADPSR
DVEIHQLV
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagctgctcagctgcccatattgcttctgtgcttcctgcatactgtttgctgt
ttggattctgttcctcctacaattcaatacaaagttttggaggaagtgcccactgggaca
ttgattggaaagattgctgatgatctgagcctggaaggtgagaatgaagcactggaggat
tttcaaattgttgagccagttcgggctttgccattccgggttggactacaagatgggact
ctttccactgcagatcgcctggatagagatgccctttgctgggataccagcccttgtttg
attccttttaatatactgtataggaaaggatggaccattgagcttttgcagttacaggtg
gaagtcttggatataaatgatcacagtccgacttttccaaacttggagcaggaaattgag
atttcagagagcgcctcactgcacaccacaataccattggatagggcgctggatccggat
gctggtaccaatgctctgcatacttattccttatcccctaaccagcattttgaattagat
gtcatcaccctgtcggaaggaaccaaacatgggcagcttgtggtcatcaaagcactggac
agggaggttcagtcttcctgtgaaatgtttctgacagcctgtgataaaggaaatccacca
aaatgtgggaccatgctggtaagggttaatgttttggattccaatgataacagcccagtt
tttgagcgcagcttgttttccgttgagctaaaggaagacacgatgccagggaccaccatc
atcaatcttcaggccaccgatcctgatcaaggggccaatggagaaattgagtattccttt
agcaagcatgtccctttagaagtactgagcatcttcaatattaacccccaaacaggaaca
gtgactctaacaggagttttggactatgagaaaagacatacttatgagcttgacatccaa
gccaaggatttggggcccaatcccatccctgcccattgcaaactccatatcaaagtcctg
gatgttaatgataatgcacccaagatacatgtcatgtgggctccaccagattctgatgtt
gccatggtttctgagggtgctgctactgaaaccttccttgccctagtgatggtatctgat
gctgactctgggttcaatgggaacatccagtgccaagtccatcatgggctgggtcatttc
cggctgaagaggacccacggagacaactatatggtagtgaccaacgccaccttggatagg
gagaggcaggagaagtacaacctcactctggtggccaaggaccaaggcatcccatccttc
tctttgacaaagcacctcaccgtacatgtaatggatgaaaatgacaatgcacctgtcttc
tcaaagagtctttatgaggtttctttccaggagaacaatccccatggcctctacattctt
acggtcaaagctcacgatgttgacctgggcctcagtgggaatgtcacttactcaatcaag
gattccacaaaaccaggaaaaccagctgcctcttttatcatccatcccacagatggtatg
atctacgctcagcagtcattagattttgagcagacaaaaggtcttacactaatagtggag
gcaacagacaatgggcaaccaccactgtctagcagcgcttctgtcttaataaatatccaa
gatgtcaatgataaccatcctttgattgtggacccagtgctgaagaaccacagggcagca
cttagcatccctgttaacacagagaagagagagatagtcagtgaggtggaagatgctgct
agtgaacacagagacacactaactaattacctcctcgagctttttccaaagagtaacgac
tctgcagcaaaactgaaaccagatggatacctagtaaccactgtcaaagcctgggatgct
gatgcaggcctaaatggagagctccgctatgagatagcaagtagggatagtttgtttgca
atagatgaagtgactggacagatttatgttaataccagcaatgttacagagctgattgga
aaagtgtttgtagtagaggtcactgttcgggacttgggttctccaccactctccactcga
gcttctttggaattgacttttctcagtctctttgaccatctcaaaaactcttctcctggc
cagcatggactactgagctttcccctgactatagccctctgccttggggccttatgtctt
atggttgccttggcagcagccttggtgaccactttctgtcggaatgagaaacgtgaaaac
cgggcttacaactgcaggcaggctgagtccacttacaccaggcatcctaggcgtccacag
aaacagatccaaaaagcagacatacacttagttcctgtgttgagagggaggcagggagag
ccagctgggggagagcctggcagacccccttcagctgggtcaacaacaactttggatgcc
ctggaagcctttcctccttgtcagttcaacctgtctccatccctcagcaggactctcagg
aaccaaactttcccagaaaacaacagcactctccccctatcccctccgagaactctccgc
aaaccacacaacattgaggagagtgggactcttcctcgtaccccggctaccccctatagg
actctcaaaaagcccaagaatatggagttccaccaaatagagggccccacagctcagcta
caggcatctctgccctatacagggacactgaagctgccaggaaaggctgcagtccagcac
agtgcacaggaagaaccagactcagcccctgcctctcccccatttcggacactcaggagg
cagaggaacacagactccaagtcgaggccagagaaagacgaccaccaacagatcttgagg
aatctggtccggatctccatggcagccttagcagagtacaaccccattgaactcactgca
gcgtccccagaggtacagcaagtctcccagctgctctccttactacaccggggccagttc
cagccaaaacccaacttccgggggaataagtactcggccagagctggcaggtctggtgta
caggatgctgactggcagagtaccaaggacagtggtcatggtgagagtgaggctggagat
atggactgggaaactgggcaggactctcccattgaccccctgctggtggaagagctagat
aacctgctgactcagacagatgatgtgtttatggacctccctgatccagcctggatggct
cgcttgtctttgccgcttaccacagactatagggagaacgtctttgtccctgaaggactc
ccttccccggagacccctgctcttctcccagctgctgatggagctgcctccttctccacc
ttcgggaaggcctctggcgagatttcacagatctctgggcacctcctctcagaggtcagc
accctctttgagatgctgctcactcagaaggcggactctcaccccaggacttctgctgaa
gtgctgtacagactctccgctgcctaccgccgctccctgggtttggaagggggagcaaca
gggggtggcaactttcctagagactcccccaaaacacaagataaagctgacccctcaaga
gatgtggagatccatcaattagtctga
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integrated database retrieval system