Acipenser ruthenus (sterlet): 117964688
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Entry
117964688 CDS
T07327
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117964688
04020 Calcium signaling pathway
117964688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117964688
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117964688
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117964688
NCBI-ProteinID:
XP_034764915
LinkDB
All DBs
Position
30:complement(17457762..17566477)
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AA seq
2368 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGGSRQGGPQVAPRMYKQSMAQRARTMALYNPIPVKQNC
FSVNRSLFIFSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPARDKTPMSA
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGTYLRNGWNVMDFVVVLTGILATIGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEQVVDYPCGTELPARTCPVGSECREYWIGPNFGITNFDNILFAVLTVFQ
CITMEGWVEILYSANDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
REFLKLRRQQQIERELNGYLEWICKAEEVMLAEEDKNAEEKSPLDVLKRAKTKKSKNDLI
HAEEGEDHFTDITSMGSPFARASLKSGKNESSSYFRRKVKRFRFFIRRMVKAQSFYWAVL
CVVALNTLCVAIVHYDQPQWLTDALYFAEFVFLGLFLTEMTLKMYGLGPRNYFHSSFNCF
DFGVIIGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGHSKTPDTGSNRFNFEEETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVRKGMFSSIYFIILTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEELEEQTNQKLALQKAKEVAEVSPMSVTNISIAAFVKQTRGALSRSSSVSSVNSPRE
QQKAMKLMSVWEQRTTQIRRHNLQASCEALYNELDPEERMRLSSLLHIRPDMKTHLDRPL
VVEPRNNVGEAAEKPPAQETTDTAPRKHHRHRDKSAEQQQDKTEVTNENGESNGKEGRHR
SHHSRSKELECKEGKSERSRSREGGKRHHHQVSVEEGAEKEHRRHRSHRHSAERQAKEGN
GTVNNGKGERRPRHKDGSRSTNKEGEAGTKGENGERPEKRHKHRSKAMSTYEGEERKENG
EKEGEAGEKERKNHWPKENQAETEPGTLASTPLQAPGSLKPVEEKPEDSDNQKNVKRTMQ
TMDNTNTVHIPVTITAPPGETTVIPINNIDFETLAKTEEKKNLEDLTRNGPKQILPYSSM
FVFTPSNPVRRLCHYIVNLRYFEMCILVVIVMSSIALAAEDPVEAEAPRNKVLKYLDYVF
TGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSSFMGAHQSVARGT
KGKDLNTIKSLRVLRVLRPLKTIKRLPKLKSVFDCVVNSLKNVLNILIVYMLFMLIFAVI
AVQLFKGKFFYCTDESKELEKDCRGQFLDYEKDEVDAQPREWKKYDFHYDNVLWAFLTLF
TVSTGEGWPTVLKHSVDATYEDQGPSPGFRMEMSIFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKVMSECSLEKNERACIDFAMSARPLTRYMPQNKQAFQYKMWKFVVSPPFEYFIMA
MIALNTVVLMMKFHGAPDVYEAMLKYLNVVFTALFSLECILKIIAFGPLNYLKDAWNVFD
FVTVLGSVTDILVTEIKTTNKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKAL
PYVCLLIAMLFFIYAIIGMQVFGNIALNGDTSINHHNNFRTFFQALMLLFRSATGEAWHE
IMLSCLSKRDCDERSGSDGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRD
SSILGPHHLDEFIRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPNRVAYKRLVK
MNMPIAEDNTVHFTSTLMALIRTALEIKLASGVPNQHQSDAELRKEICTVWPNLSQKTLD
LLVTPHKPNELTVGKVYAALMIFDYYKQNRIKRIQQQQQQQQQQQQQQQQQSAGGLAQNK
TGALFQPMLPLTFMQDQKPPLNNVKPSSASLNNGGALPGQEGTSKEPPYWVTERTQEVFQ
RSSKRTIERGRSEDTPNSAGVQESVEMRKMDSHGDPQPGLESQGRAASMPRLTAETQRSK
SRSPGSYLAPIPDSSPMKRSVSTLTPQRPLEVNLQDYSLEPTAPDRTHHHHHHHHHRCHR
RRDKDRKQHSLERSPSRQASTDAGTPGDPASSTLLGEPASRDRGRERGRSHERKHHSSSS
EKQRYYSCDRYGSRDHSQPKSSNPSRSTSPCEGQDRQGSGSVNGSLVMLSSGASTPCRGR
RQLPQTPLTPRPNVTYKTASSSPVQFSAGLPSFSPARLSRGLSEHNALLCGDSQNQSHVA
VTRIGSDPYLGHRNDSDGPEDMLTFEDALASNIGRAPRTPYAVSTPTQPQQSRGVPNGYH
YAVGVNAGPGSGTRGRRYYYEADQDDWC
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagacgacctaccaacccgctatggaggcggcggtccggcaggcgct
gggagagggggaagccggcagggaggcccccaagtcgcgccaaggatgtacaagcagtcg
atggctcaaagggccaggactatggctctctacaaccccatccccgtcaaacaaaactgt
ttttcggttaacagatccctcttcatctttagcgaagacaatatcatacgaaaatatgcc
aaacgaataaccgagtggcctccatttgaatacatgattctagccacaatcatagcaaac
tgcatcgtcctggcgttggaacagcacctaccagcaagggataagacaccgatgtcagcg
agactggacgacacagaaccctacttcattggaattttttgttttgaagctggcataaag
atcattgccctgggctttgcctttcacaaaggcacctacctgcggaatggctggaacgtc
atggatttcgtagtcgtcctgaccggtattttggccacaatcggggcagactttgatcta
aggaccttaagagctgtcagagtgctacggccgctgaaactcgtgtcagggattccaagt
ctccaggtggtcctgaagtctatcatgaaggcaatggtgcccctgctgcagatcgggatg
ctgctcttcttcgctatcgtcatgttcgccatcatcggcttggagttctacatgggcaag
ttccacaagacctgcttcagcaacgaaacaggtgagcaggtggtagattacccctgcggc
accgagctccctgcgaggacctgtcccgtcggctcagagtgcagggagtactggatcgga
cccaacttcggcatcaccaacttcgacaacatcctgttcgcagtgctcaccgtcttccag
tgtatcaccatggagggctgggtggagatcctgtacagtgcgaatgacgctgcaggaaac
acatggaactggctgtacttcatcccgctcatcatcatcggctccttcttcatgctcaac
ctggtgctgggagtgctgtccggagagtttgctaaagagcgcgagcgagtggagaagagg
agggaattcctgaagctccgcaggcagcagcagatcgaacgagagctgaacgggtacctg
gagtggatctgtaaggcagaggaagttatgttagctgaagaagataagaacgcagaggag
aaatctcccttggatgttttgaaaagagcgaaaacgaagaagagcaagaacgacctgatc
cacgcggaggaaggggaggaccacttcactgacatcacctccatgggatctccgttcgca
cgagccagcctgaagagcgggaagaacgaaagctcctcctacttcaggcgcaaggtgaag
aggttccgattctttattcgccgcatggtgaaggcgcagagcttctactgggcagtcctc
tgcgtggtggccctcaacactctctgtgtggccatcgtgcactacgaccagccgcagtgg
ctcaccgacgcactgtatttcgccgagtttgttttcctggggctgtttctgaccgagatg
actttgaaaatgtacgggctgggcccacggaactactttcactcctcgtttaactgtttc
gattttggggtgatcataggcagtatttttgaggtgatctgggctgcagtgaagcccggg
gcttcgtttggtattagtgtgctgagagctctgagactgctgaggattttcaaagtgacg
aagtactggaactctctgcgtaacctggtcgtgtctctgctcaactccatgaagtccatc
atcagcctgctcttcctgctcttcctcttcatcgtggtcttcgctctgctgggcatgcag
ctcttcggcggacattccaagacgccggacacgggttccaacaggtttaatttcgaggag
gaaacgccaacaacaaatttcgatacatttcctgccgcgattctcacggtctttcagatc
ctgaccggtgaggactggaatgcagtgatgtatcatgggattgaatcccaaggtggcgtc
cgcaaaggaatgttctcgtccatctatttcatcatcctcaccttgttcggtaactacaca
ctgctcaatgtcttcttggccattgctgttgacaacttggccaatgcacaggaactaaca
aaggatgaggaagaactggaagagcaaaccaatcagaaacttgccctccagaaggccaag
gaggtagcagaagtcagccccatgtcggtcactaacatttccatcgcagcttttgtaaag
caaactcgaggtgctctatctcgcagctcgtccgtctccagcgttaattcacccagggag
cagcagaaggcgatgaagctgatgtcggtgtgggagcaacgcaccacgcagatccggagg
cacaacctgcaggcgagctgcgaggctctgtacaacgagctggaccccgaggaacgcatg
cgactctcctccttgctgcacatccgacccgacatgaagacgcacctggaccgccccctg
gtggtggagccccgcaacaatgtgggggaggcagcagagaaacccccggcccaggaaacc
accgacacggcccccaggaaacaccaccgccaccgggacaaatcggccgagcagcagcag
gacaaaacagaagtgaccaacgagaacggagagtccaacgggaaagaggggaggcaccgc
tcccaccacagccggagcaaagaactggaatgcaaggaggggaagagcgagcgcagccgg
agcagggaaggggggaagaggcaccaccaccaggtctctgtggaggagggggcggagaag
gagcacaggaggcaccggtctcaccggcactccgccgagcgccaggccaaggagggcaac
ggcaccgtcaacaacgggaagggagagaggcgcccccggcacaaggacggttctcgatcc
accaacaaagagggagaggcaggaaccaagggggagaacggggagcggccagagaaacgc
cacaagcaccgctccaaagccatgtccacttacgagggggaggagaggaaggagaacggg
gagaaggagggagaggctggggagaaggagcgcaagaaccactggccaaaggagaatcag
gctgagacagagccagggaccctggcctccacacccctgcaagccccaggcagcctgaag
ccagtggaggagaagccggaagactcggacaaccagaagaacgtgaagcgaacgatgcag
acgatggacaacaccaacactgtgcacatccccgtcaccatcacggcaccgcctggggag
accaccgtcatacccatcaacaacattgatttcgaaactttggcaaaaactgaagagaaa
aagaacctggaagatctcaccagaaacggaccgaagcaaatcctgccctacagctccatg
tttgtgttcactccatcaaaccctgtgcggaggctgtgccactacattgtgaacctgcgc
tacttcgagatgtgcatcctggtggtgatcgtcatgagcagcatcgccctggcagccgag
gatccagtggaggccgaggctcccagaaacaaggtcctcaaatatctggactacgttttc
acgggagtcttcacgtttgaaatggtgatcaagatgatcgatttgggcctgttgcttcac
cccgggtcttatttccgagacttgtggaacattctggatttcattgtagtcagtggtgcc
ttggtagcgtttgccttttcaagcttcatgggagcacaccaaagtgttgccagaggaacc
aaaggaaaggacctcaacacaatcaaatccctgcgagtactccgagtcctccggccattg
aagacgatcaagcgattgcccaaactgaagtcggtgtttgactgtgtggtaaactctctg
aagaacgtgctcaacatcctgattgtctacatgctcttcatgttaatcttcgctgtcatc
gccgtgcagctcttcaaagggaagttcttctactgcaccgacgagtccaaggagcttgag
aaggactgcaggggtcagtttttggattacgagaaggacgaagtggacgcacagccccgg
gagtggaagaaatatgatttccattatgacaacgtgctgtgggccttcctgacgctcttc
actgtctcaacgggagagggctggccaaccgtcctgaagcactccgtggatgccacctat
gaagaccagggtcccagccccggcttccgcatggagatgtccatcttctacgtagtctac
ttcgtggtcttccccttcttctttgtcaacatctttgtggctttgatcatcatcaccttt
caggagcagggtgacaaagtgatgtcggagtgcagcctggagaagaacgagagggcctgt
attgactttgccatgagtgccaggcctctgacccgctacatgccccagaacaagcaggcc
ttccagtacaagatgtggaagtttgtggtgtctccccccttcgagtatttcatcatggcc
atgatcgccctcaacactgtggtgctcatgatgaagttccacggagcccccgatgtatat
gaagccatgctgaaatacctgaacgttgtgtttacagctctcttctccttggagtgtatt
ctgaagatcattgcgtttggtccactgaattacttaaaggatgcctggaacgtgtttgac
tttgtcacggtactgggaagtgtcactgacattctggtcaccgaaattaaaacaacgaat
aaactgatcaacctgagtttcctgcggctgttccgagcggcgagactgatcaaactgctc
cggcagggctacaccatccgcatcctgctgtggaccttcgtccagtccttcaaggctctg
ccctacgtctgcctcctcatcgccatgctgttcttcatatatgccatcattggaatgcaa
gtgtttggaaacattgctctgaatggtgatacctcaatcaaccatcacaacaacttccga
acttttttccaggctcttatgctgctgttcaggagcgctacgggggaggcctggcacgag
atcatgctgtcttgtctgagtaaacgtgactgcgacgagcgctcagggtcagacggtaaa
gagtgcggcagcgacttcgcctacttctactttgtgtccttcatcttcctctgctctttc
ctgatgctgaacctctttgtcgctgtcatcatggacaactttgagtacctgactcgagac
tcctccatcctggggcctcatcacctggacgagttcatccgcgtctgggcagagtacgac
cctgcagcctgtggccggatacattataaggatatgtacagtttgttacgtgttatctcg
cctccccttggattagggaagaagtgccctaatagggtggcgtataagcggcttgtgaaa
atgaacatgccgatcgccgaagacaacactgtgcacttcacctccacactcatggccctg
atcagaaccgctctggagatcaagctggcctcaggtgtgccaaatcagcaccagagcgac
gccgaactgaggaaggaaatctgcacagtctggcccaatctttctcagaagacgctggat
ctgttggtgactcctcacaagcctaacgaactgactgtgggtaaggtctacgcagccctg
atgatctttgactactacaagcagaacaggatcaagcggatccagcagcagcagcagcag
cagcagcaacagcaacagcaacagcagcagcagtccgcagggggactggcccagaacaag
acgggcgccctcttccagcccatgttgccgctcaccttcatgcaagaccagaagcctcct
ctgaacaacgtgaagcccagctctgcctcgctcaacaacgggggcgcactgcctggacag
gaagggactagtaaggaacctccatactgggtgacggagcgcactcaggaagtgtttcaa
cggagcagcaagcgtacgatcgagagagggcgctctgaggacaccccaaacagcgccggt
gtgcaggagtcagtggagatgaggaagatggactcccatggggatcctcagcctgggcta
gagagccagggccgggcagcctccatgccacggctgacagcagagacacagaggagcaag
tctcgatccccggggagttacctagcaccgatcccggactccagtccaatgaagcgctcc
gtgtccacgctgaccccacagcgccccctggaggtgaacctgcaggattactctctggag
cccacggcccccgaccggacacaccaccaccaccaccaccaccaccaccgctgccaccgg
cgccgagacaaggacaggaagcagcactcgctcgagaggtcccccagccgccaggccagc
acagacgcaggtacgcccggtgacccagcatcctccaccctgctaggggagcctgcgtcg
cgggacagggggcgcgagagggggcggtcccacgagaggaagcatcactcctcttcctcg
gagaagcagcgatactactcctgcgaccgctacgggagccgagaccactcccagcccaaa
tccagcaacccgagccgctccacctccccctgtgagggccaggacagacagggcagtggt
tcagttaatgggagcctggtgatgttgagctctggtgcgagcaccccttgccgaggacgc
aggcagctgcctcagacgcccctcaccccccgccctaacgttacctacaagacggccagc
tcctcccctgtgcagttcagcgccggcttgcccagcttctctccggcccggctgagtcga
ggcttatccgagcacaacgctttgctgtgcggagactcccagaaccaatcccacgtcgct
gtgacccgcatcggctccgacccttacctgggacacaggaacgattctgatgggccagaa
gacatgctgaccttcgaggacgctctggcctccaacataggacgagcccccaggactcct
tacgcggtctccaccccaacgcagccccagcaaagcaggggggtccccaacggctaccat
tacgctgtgggtgtcaacgcgggccccggctcaggcactagggggcgccggtactattac
gaggcggaccaagatgattggtgctag
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integrated database retrieval system
