Acipenser ruthenus (sterlet): 117964711
Help
Entry
117964711 CDS
T07327
Name
(RefSeq) snRNA-activating protein complex subunit 4-like isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117964711
03021 Transcription machinery [BR:
arut03021
]
117964711
Transcription factors [BR:
arut03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
117964711
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
117964711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
117964711
NCBI-ProteinID:
XP_034765055
LinkDB
All DBs
Position
30:complement(13584169..13604232)
Genome browser
AA seq
1543 aa
AA seq
DB search
MASGALNAERDRIQREIEELERNLGLAAAASTDVSFSESENEGSELEQADEGTDGGAQPP
IGMSAAELSAEREKIQREIEELERSLGPAAACMDVSPLGSQEEDSEEDEEADGRFVMDMG
GADGEEEEDLGLPEDSETCLQINLVYQEVIEEKLQELEVLLAENREQQNEILSQLSVSQA
DKTDGTKLPPSNQFLGHFLKPYFKDKTTGLGPPPNPDTREKMAQGIKSFEDLGVRKWKSW
EKALLRSSVVSDSLRRLLQPKLSRVEYLTQKMEKANGMEKQILEKQISQTEKEIEDISRM
PDDELIGNREQEHDWEKISNIDFEGLCKPEELRKYWQNHLHMEINKKKWSDEELERLKEI
AANHNHTNWDKIAEELGTNRRPFMCLQMYQLFINTELKKKYFTKEEDQVLTELVEKMRIG
SHIPYTKISYFMEGREAAQLIHRYTHSCDPALKRGPWSSEEDALLIKAVAEYGPREWWKI
QAKVPGRTDAQCRDRYMNCLSEDVKKGKWCSEEETLFIDLVNKHGVGRWAKIASEIPNRT
DSQCLHKWNTLTKPKKRRQKLKEVRSSRLGRKRSKNISKLKRKASLLKKGMLSSSDSEEM
ELSDSVEEGSGTENDDDSESESEEEEKEEYTMPSIDLWIPVGPDIPELPRSKRPARKRAP
TPTPTAPLNPDAALPSPEAQAQSGPADRRKNMVPPRSTAVASERSTVLKGPGYLANRNLN
SSSPAELTTTVSQTGNKILKLTFTEVRKLLRPKSKLQEKTGKKKKGVEKQKTTRAFVSHL
QSNNLNQKLMMAVTPWMENVLMPKGRCKRTEADVIRERAEKIGLATTPVFTLFITMFQID
AEGCRKVIEERAKRFNAERCKKVGQDRAKRIETEGCIQDRTRRGTPNYNSVQNNSGPLIR
PTASSVRTVAQVLYEKRLKEARMKKRAAPHTSILLMPSMIVPQTVVIQQPLVQVTPEQHN
PSPVIPTEVTAEKPNASGGGETGKTAGDKPAKIPPRKRQRTSKTKHPEGDSSTHSTNPIQ
IPASNTVSSNPIQIRASNTVSSNPIQIPDSNTVSSNPIQIPDSNTVSSNPIQIPDSNTVS
SNPIQIPASNTVSSNPIQIPGAAPSPMTISWILTPQGLVPVATQAPIAMQAQNAPQSPVV
VPLNQQGSQQSLATDTPKRQPNIASSTTSPALPKASAAPGSITNVVTAAGQVLNPVSLVS
TPSIYPLPTSSAVGTATVQTCGTIPSSPGQIQINRSAVTGLVQPNFQVRPLLSNLQGFRL
VRVVWPTGQGTVSNLPARTGFPSNQVQQVSTAQSAQIPVRVVQQPHPSGLPASQTPAVAN
SSCCPPGPPNASTAKANKISVDLNLMFQEDEALVKEWLRGKGGVRLPKLNVALPYLPPSV
FNLTALLQLLGQKKSLEEKASILVSGAGHEDGRSETQVDAIRSLVAEKLDNNPAYLLLKA
RFLACFTLPAFLATVPPVSASTTAPEFLDGTDFKTKSQDRRGAGPAKSPRPQGPMEGCLE
TAPSIINEESTGESSSLLGSDGVVASEFIGMRTRRSTRLKKRM
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagctctgaatgcggaaagggataggatccagagggagattgaggagctg
gagagaaatctgggtctggctgctgctgcttctactgacgtttcattttctgagtcagaa
aatgagggttcagagttggagcaagcagatgaaggtacagatggtggtgcacagcctccg
attggtatgtctgctgcggagctgtctgctgagagagagaaaatccagagagaaatcgag
gagctggagcgcagtttgggtcctgcagctgcctgcatggatgtgtcccctctcgggtca
caggaagaggattccgaggaagatgaagaggctgatggtcgttttgtgatggacatgggg
ggtgcagatggagaggaggaagaagacctggggcttcctgaagacagtgagacctgtctg
cagatcaacctggtgtaccaggaggtgatcgaggagaagctgcaggagctggaggtgctg
ctggctgagaacagagagcagcagaatgaaatcctctcccagctgtctgtttcacaggct
gacaagacagacggaaccaagctgccaccatccaaccagtttttagggcacttcttgaaa
ccatattttaaggataagacgactggccttggtccacctcctaatccagatacaagggag
aagatggctcaaggaattaagtcctttgaagatcttggggtgagaaaatggaaaagctgg
gagaaggccttgctgcgttcatcggtggtaagcgacagcttgaggcgtttgctgcagcca
aaattatcaagggttgaatatttgacccagaaaatggaaaaggccaacggaatggagaaa
cagatccttgaaaagcagatcagtcaaacagagaaggaaatcgaagacatcagccggatg
cctgatgatgagttgattgggaatcgcgaacaagaacatgactgggaaaagatttcaaat
attgattttgaaggcttgtgcaaaccagaagagctgaggaagtactggcagaaccacctg
cacatggagatcaacaagaagaagtggagcgatgaggagcttgagaggctgaaggagatc
gcagccaatcacaaccacaccaactgggataagattgctgaggagctggggacaaaccgg
agacccttcatgtgcctgcagatgtaccagttgttcattaacacagagctgaaaaagaag
tactttactaaggaagaggatcaggtgctgacggagctggtggaaaaaatgagaatcggc
tctcacatcccgtacaccaaaatttcctatttcatggagggaagagaagcggcgcagctc
atccatcgctatacgcatagttgtgatccggctctgaagagggggccgtggtcaagtgag
gaagatgcgttgttaataaaagcagttgctgagtacggccctcgggagtggtggaaaatt
caagcaaaggtcccaggaagaaccgatgcacagtgcagagacaggtatatgaattgcctg
agtgaagatgttaagaaagggaaatggtgctcagaagaggagactttgttcattgacctg
gttaataagcatggagtcggccgttgggcgaaaatagcctcagagattcccaaccggaca
gactcacagtgtctacataaatggaacaccctgacaaaaccaaaaaagagaagacagaag
ttaaaggaagtcagatcgtcgagattagggagaaagagaagtaagaacataagtaagctg
aagaggaaggcgtctctgctgaagaagggcatgctatcgagctctgactccgaggagatg
gagctgtcagacagcgttgaggaggggtcgggcaccgagaacgatgacgactcagagtca
gagtcggaggaggaggagaaggaggagtacaccatgcccagtattgacctgtggatccct
gtcggccctgatattcctgagctccccaggtctaaacggcctgctagaaagagagcaccc
acacccacccccaccgctcctttgaaccctgatgcagcgctccccagccccgaagctcaa
gcccagagcggaccggcagatcgcaggaagaacatggttccaccccgtagcaccgctgtc
gcttctgaacgcagtaccgtgctcaaaggcccgggatatctcgcaaaccgcaacctgaac
agcagcagccctgctgaactgaccaccacggtttcccaaacaggaaataaaatattgaag
ttgacctttacagaagtgaggaagctactgagacctaaaagtaaactccaggaaaagacg
gggaagaagaagaaaggtgtggagaaacagaaaaccaccagagcttttgtctcccacctg
caaagcaataacctgaaccaaaagcttatgatggcggtaactccctggatggagaacgtt
ttaatgcccaaaggcaggtgtaagcgcactgaagctgatgtcattagagagagagctgag
aaaattggtcttgccaccacaccagtgtttactctgtttattacaatgtttcagattgac
gcagaaggctgtaggaaggtcatcgaggagagagcgaaaaggtttaacgcagaacgctgt
aagaaggtcggccaggacagagcaaaaaggattgagacagaaggctgcattcaggacaga
actagaagggggacccctaattataactcagtccagaataacagtgggccactgatacgt
cccacggccagtagcgtgagaacggtggctcaggtattgtatgaaaaacgattaaaggag
gccaggatgaagaagagagccgctcctcatactagcatccttctcatgcccagtatgatc
gtgcctcagacagtggttatccagcagcctttggtacaggtcactcctgagcagcacaat
ccttctccagtcattcccactgaggtcacagctgaaaagcccaatgcctctggaggaggg
gagacagggaagacagcaggtgataaacctgcaaaaataccaccaagaaagagacagaga
acaagcaagaccaaacatccagagggtgactcgagcacccattccacaaaccccatccag
atacctgcctcaaatactgtttcttcaaaccccatccagatacgtgcctcaaatactgtt
tcatcaaaccccatccagatacctgactcaaatactgtttcatcaaaccccatccagata
cctgactcaaatactgtttcttcaaaccccatccagatacctgactcaaatactgtttca
tcaaaccccatccagatacctgcctcaaatactgtttcttcaaaccccatccagatacct
ggagctgcgccctcccctatgaccatcagctggatattgaccccacaaggtctagttcct
gtcgctacccaagccccaatagcaatgcaggcccagaatgcaccccagtccccagtcgtg
gtgcctctgaaccagcagggttctcagcaaagcttagctactgacactccaaagagacaa
ccaaatattgccagcagcacaacaagcccagcactgcctaaagcttctgctgcccctgga
agcatcaccaacgtagtcactgctgctgggcaggtactaaatcctgtgtctctggtttcc
actccctcaatttaccctttaccgaccagttctgcagtgggcactgccacagtgcagact
tgtggaacaatcccgtctagtcctggacaaattcagatcaataggtctgcagtaacaggc
ttggttcagccaaactttcaagtgagaccacttttgtctaatctacaagggttcagattg
gtcagggtggtgtggcccactggccagggaactgtcagcaatcttccagcaagaactggg
ttcccctccaaccaagtccagcaagtatctacagcccagtcagcacaaatacctgtgagg
gtggttcagcagccacatccgtcaggtttgccagcctcccaaactccagctgtagccaac
tcgtcttgctgccccccaggtcctccgaatgcttccaccgccaaggctaataaaatcagt
gtggacctgaacctgatgttccaggaagatgaggctttggtgaaagaatggctcaggggg
aaaggaggtgtccgtctgcctaagctgaatgtggcgcttccctatctgcctccttcagtc
ttcaacttgacagcgctattgcaactccttggacagaaaaagtccttggaggaaaaggcc
tcgattctcgtctctggggcaggacatgaagacggcaggtcggagacccaggtggatgct
attagaagcttagttgcagaaaagctggataacaacccggcttaccttctcctcaaagca
cggttcctggcgtgtttcactctcccagcatttctagcaaccgtccctcctgtgagtgcc
tcaactactgccccagagttcctggacggcactgactttaagactaaaagccaagacaga
cggggtgcaggtccagctaaaagtcctagaccacagggacccatggaaggctgtttagaa
acggctccatccatcataaatgaggaaagcactggagaaagttcatctctcctggggtcc
gatggagtggtggccagcgaattcatcgggatgaggacaagaagaagtacccgcttaaaa
aaaagaatgtag
DBGET
integrated database retrieval system
