Acipenser ruthenus (sterlet): 117964721
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Entry
117964721 CDS
T07327
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117964721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117964721
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117964721
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117964721
BRITE hierarchy
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
EXOSC1
Med16_C
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
117964721
NCBI-ProteinID:
XP_034765156
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All DBs
Position
30:complement(15727327..15732287)
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AA seq
294 aa
AA seq
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MAADMRLAAARKRAPGSLVSQDESKHLVAPGDVITTDTGFMRGHGTYTEDEKLMASVAGE
VERVNKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRRSSEDELAMRDYLQEGDLISAEVQSVFADGALSLHTRSLKYGKLGQGVLVQVSPSLV
KRRKTHFHNLLCGASIILGNNGYVWIYPTPAQQDEEAGGFFTSTEPVPLCDREVISRLQN
CILALSAHKVLLYDTSVLYCYESSLAHQIKDTLKPEVIEEIVMETRQRLLEQEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacatgagactagcggctgcacggaaacgcgctcccggttccctggtgtca
caggacgaaagcaaacacctggtggcaccgggagatgtcattacaaccgacaccggcttc
atgcggggccatggcacctacacggaggatgagaagctcatggcttccgtcgctggtgaa
gtggaacgagtgaacaaactgatctgtgtcagaccgctgaagaccaggttcaatggagag
gtcggtgacgtggtggttggccggatcactgaggttcaacagaagcgatggaaggtggag
actaattcccgtctggactcggtccttttgctttcatccatcaacctgccaggaggggag
ctgaggaggagatcatctgaagacgagctggccatgagggattacctgcaggagggggat
ctcatcagtgctgaggtgcagtctgtgtttgcagacggggctctctctctccacacacgc
agtctgaagtacggcaagctggggcagggcgtgctggtgcaggtctccccctccctggtg
aagcgccgcaagactcacttccacaacctgctgtgcggcgcctccatcatcctggggaac
aacggctacgtgtggatctaccccacccccgcccagcaggacgaggaggccgggggcttc
ttcaccagcaccgagccggtgcccctctgtgaccgggaggttatctcgaggcttcagaac
tgcatcctcgccctgtctgctcacaaggtgctgctgtatgacaccagcgtgctgtactgc
tacgagtcctcgctcgctcaccagataaaggacaccctgaagccagaggtcatagaggag
atcgtcatggagacccggcagagactcctcgaacaagaaggatga
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