Acipenser ruthenus (sterlet): 117965169
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Entry
117965169 CDS
T07327
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
arut
Acipenser ruthenus (sterlet)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
117965169
NCBI-ProteinID:
XP_034766047
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Position
33:640665..668562
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AA seq
1056 aa
AA seq
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MGPPVRIHCPLVVASLVLCLVNLTGCTSFPKDLEPINTVSQQHSFLYPGFQGLPSDNETV
RLGLDFQRMTRINQMLYIAARDHVFAIDLSLSDEEIVPQRKLTWKTKPEDLKNCAMRGKN
NDECYNYIKVLVPRNDQTLFACGTNAFNPTCRYYKMDSLEQEGEELLGQARCPFESKQPN
VALFADGNLYSATMADFQASDAVIYRSLGDRSPVLRTVKYDSKVLREPHFLHAIEYGKHV
YFFFSEIAVEYTTLGKVVFSRVARVCKNDLGGSPRVLEKYWTSFLKARLNCSIPGDSFFY
FDVLQSLSDVVEVNGRPAVVGVFSTQANSITGSGVCAFYMDDIEKVFNGKFKEQKTTESA
WTPVPDERVPKPRPGCCAGDGPADSYKASSSFPDETLSFIKSYPLMDEAVASVNEKPWFT
KTGSRFKLTQIAVDTAAGPGKNHTVVFLGSEEGKVLKVLCSSAANSSHDSLLLEEMDVYN
PAKCNVRGEDRRILGLEMDKDHHALFVAFSSCVIRVPLSRCRDYGRCKKSCLSSRDPYCI
WLKTGSCSSLEPGFKAGFEQDIENRFAQQPDSCHDVMATTQNQYSPGDSAYGKTTPTSSS
TTNQWAASPQVRGRSETGTIPVDRSPFAGSSDSLAVGVEIEGVRQLPAAEKAAHTVHFTL
LIACVVVAFALGAFLSSLLVTCYCNHVFHKTKRLSKDPESTIPHALSLRSLAKLNGLLDG
PAKDEKLEAPAPHKLYNSLIPNGKERSVGNGKGDSRHPPELSGLPTPESTPELPIKSAKA
FKNQWEKNQNFNNAAKEGIHPLVPSSRPTSGVPAQVFQFPNSLVLSGNGNGNVLGGQLHP
EEPKIPNAERVRAQPYPCYPRKTAEVNALDELLRHLHGVNGAPTGAPLAPNNVRLPFANR
VQPQIPDTESAPYYSSSTLPRDSLTRRMDVPPDMPPPQPTLERPSRHPSQRQSLCLVPNV
SSGSEICRQHSFNPRSGPPPLLARMNSAGSYVENNHQPLHPIGYLSRQHSYTGQATALPR
AGAVRRTASMKPDVPPKPTFIPASSPAVNPSNHFNY
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgggtccccctgtcagaatacactgccccctggtggtcgcctctctcgtgctttgcttg
gtcaacctgacaggctgtacaagtttccccaaagacctggagccgatcaacacagtcagc
cagcagcattctttcctgtaccccggatttcaaggtctgccttcagacaatgagacagtc
agactagggctggacttccaaagaatgactcgaatcaaccaaatgctgtacattgctgcc
agggaccacgtgtttgccatcgatctgagcctctccgacgaggagatcgtacctcagcga
aagctaacttggaaaacaaagccagaagatctgaagaattgtgctatgagggggaaaaac
aatgacgaatgttacaactacatcaaggtgttagtacctcgcaatgaccagactctcttt
gcctgtgggacaaatgctttcaaccccacatgccgttattataagatggactctctggag
caggaaggggaggagctcctcggtcaggcccgctgtccgtttgagtcgaagcagcccaac
gtagccttatttgcagacggcaatctgtactctgcaacgatggcagacttccaagccagc
gacgcggtcatctatcgaagcctgggggacaggagtccggttctcaggacagtgaagtac
gactccaaggtgcttcgagaacctcattttctccacgccattgagtacggaaaacacgtg
tattttttcttcagtgaaatcgcagtggaatacaccacgctgggaaaggtggtgttttcc
agagtggcccgggtttgtaagaacgatctcggaggttctccgcgcgttctggagaagtac
tggacctcgttcctcaaagctcggctcaactgctccatcccgggggactccttcttctat
ttcgacgttctgcagtcgctaagcgacgtggtggaggtgaacggacggcccgcagtcgtg
ggagtattttccacgcaggcaaacagcatcacaggatcgggggtctgtgctttctatatg
gacgatatagagaaggtcttcaacggaaagttcaaagaacagaagaccaccgagtctgcc
tggacccccgtacccgacgaacgagtccccaaacccagaccgggttgctgcgcgggggac
ggccctgcagactcttacaaggcgtccagcagcttccccgacgagaccctgtccttcatc
aagtcctacccgctgatggacgaggccgtggcatcggtgaacgagaagccctggttcaca
aagacgggcagcaggttcaagctcacccagattgctgtggacacggctgcgggccccggt
aagaaccacacggtggtgttcctgggatctgaagaggggaaggtcctcaaagtcctctgc
agctccgcggctaactcctcccacgacagcctcctgctggaagagatggacgtctacaac
ccagcaaagtgcaacgtgcgaggagaggacaggaggattctgggattggagatggacaag
gaccatcatgctttgttcgtggcgttctccagctgcgtgatccgggttccgctcagccgt
tgccgggactacgggagatgcaaaaaaagctgtctgtcttctcgtgatccctactgcatc
tggctaaagaccggcagctgcagctccctcgaaccagggttcaaagcagggttcgagcag
gacatagagaacagattcgctcagcaaccagacagctgccacgatgtcatggctactact
cagaatcaatacagccctggtgactcagcctatggaaagaccacacccacaagttcaagc
accaccaatcagtgggcggcttccccacaggtcagaggtcgctcagagacaggtaccatt
ccagttgaccgctccccctttgctgggtcaagcgattctctggctgtcggagtggagatt
gagggggtgagacagctgccggccgcggagaaagccgctcacacggtccacttcaccctt
ctgatcgcctgcgtggtcgtcgccttcgccctgggggctttcctgtccagcctcctggtg
acctgctactgcaaccacgtcttccacaagaccaagcggctgagcaaggaccccgagtcc
accatcccccacgctctgtctctccggagcctggctaagctcaatggccttctggacggg
ccggccaaggacgagaagctggaggcgcccgccccccacaagctctacaactccttgatc
cccaacgggaaggaacggtccgtgggaaacgggaagggagactcgaggcaccccccggag
ctctcggggctgcccacaccggagtcgaccccggagcttcccatcaagagcgcgaaggct
ttcaagaaccagtgggagaagaatcagaatttcaacaacgccgccaaggaggggatccac
ccccttgtgcccagttccagacccacctccggggtgccagctcaggtcttccagttcccc
aactccctggtgctctccgggaacggcaacgggaacgttttgggcgggcagcttcatccg
gaggaacccaagatcccgaatgccgaacgggtcagagcccagccctacccctgctaccca
cggaagacggcagaggtcaacgccttggacgagcttctgaggcaccttcacggggtcaac
ggcgccccgaccggtgcccctctggcccccaacaacgtgcgcctccccttcgccaacagg
gtccagccccaaatccccgacacggaatctgcaccttactacagctcctccaccctcccc
agggacagcctgaccaggaggatggacgtcccgccagatatgccaccaccgcagcccact
ttggagagaccctccaggcacccttcgcagagacagtccctgtgtctggtccccaacgtg
tcgagcgggagtgaaatctgccggcagcacagtttcaaccccagaagcgggccgccccct
ctcttggcgcggatgaactcagccggcagttacgtggaaaataaccaccagccgctgcac
cccatcggttacctgtcgcggcagcacagctacaccggtcaggccacggcgctccccagg
gcgggcgcggtgaggagaacggcttcgatgaagccagacgtgcccccgaaacccacgttc
ataccagcttcctctccggcggtcaacccttcgaatcacttcaactattag
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