Acipenser ruthenus (sterlet): 117966188
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Entry
117966188 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117966188
04121 Ubiquitin system [BR:
arut04121
]
117966188
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117966188
Membrane trafficking [BR:
arut04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117966188
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117966188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
zf-RING-like
C1_2
DZR
DZR_2
DUF3678
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
117966188
NCBI-ProteinID:
XP_034767650
LinkDB
All DBs
Position
39:3895715..3901807
Genome browser
AA seq
312 aa
AA seq
DB search
MAEAPTRPGRFFCHRCSAEISPHLPDYTCPRCESGFIEELPEERSAENGSTSSASTSDQN
RHQFETLDQHMFTFPPGYGQFALGIFDENFEFSAGPPSEDNRETENRRERELASRQRYGA
RQPRARHMARRQTGRHEGVPTLEGIIQQLVNGIIAPTAIPNIGLGPWGMLHSNPMDYAWG
ANGLDAIITQLLNQFENTGPPPADRDKIKSLPTVQVTEEHVGSGLECPVCKEDYTAGENV
RQLPCNHMFHNDCIVPWLEQHDTCPVCRKSLSGQNTATNPPGLSGMNFSSSSSSSSSSSS
SSPGNENTTNNS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcccacaagacccggtcggtttttctgtcaccgctgctcggcggagatc
agcccgcatctcccggattacacctgcccgaggtgtgagtctggctttattgaagaacta
cctgaagagagaagcgctgaaaatggttccacctcttcagcctctaccagtgatcaaaac
cggcaccagtttgagaccctggaccagcacatgttcacctttccccccggctacgggcag
tttgcgttggggatttttgacgagaactttgagttcagcgcagggccgccctcggaagac
aacagggagacagagaatcgcagggagagggagctggcgtcaaggcagcgctatggtgcc
aggcaacccagggcgcggcacatggcaagacggcagacagggaggcacgagggggttccc
acgctagaaggaattatccagcagttagtgaatggaattatagcacctacagccattcca
aacataggactgggtccctggggtatgttgcactcaaacccaatggactatgcatggggg
gcgaacggacttgatgcaattataacacagttattaaatcagtttgaaaacaccggcccc
cctccggcagacagagataaaattaagagcctccccacagtgcaggttacagaagaacac
gtaggttcaggtctagaatgtcccgtctgtaaagaagattacaccgcaggagaaaatgta
aggcagctcccatgcaatcacatgtttcacaatgattgtatagtaccgtggcttgaacag
cacgacacgtgtccagtttgcaggaaaagtttaagtggacagaacacagcgacaaatccg
cctgggttatcggggatgaatttctcctcctcctcctcttcctcctcctcctcttcctcc
agttctcccggcaacgagaacacaacgaataactcataa
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