Acipenser ruthenus (sterlet): 117966287
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Entry
117966287 CDS
T07327
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04020
Calcium signaling pathway
arut04080
Neuroactive ligand-receptor interaction
arut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117966287
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117966287
04082 Neuroactive ligand signaling
117966287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117966287
Ion channels [BR:
arut04040
]
Ligand-gated channels
Glutamate (ionotropic)
117966287
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117966287
NCBI-ProteinID:
XP_034767982
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Position
40:2209064..2252169
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AA seq
1085 aa
AA seq
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MDGFVSKIFAYLHLMHICINSSHSHPQPCHILAQIGHTVRLGALMPTRQPARVQGSLNRA
LSSLSQTRGNNLLPYNLSLELVYGEPLDGDPESLFRCVCQAIAVRGVSAVLAFPQTPEEL
IQVEFLSSFLEIPFISIMEHGEPLDTGSPFHLQMLTRSPWSSLAELLLSVLQAAGWREGT
ALLCGGWEEAPVLDWLSRHPLSWQLEAVLDLTQVAEEQGGIFHFLSKHFRSLGLKTLPHS
SSVLLFGADPQCISAVLHSAQELGLTLPAVHWLLGQPLTPEVLHTLGLPFGLLAYGEVNQ
KPLDFYIQDAVELVTRAVSAAAAVWPDRALIQSMVNCYDKRSQERAPSSGQYLARFLADT
SFNGQTGPVAVGNSSRVLTSPLFHIWSLQRDPLGQPTWVTVGNWKRGRLVVEEQGFWQVR
GLRRRSGMGGGPGSRGVRGDGTWGSSRTRLRVVTLVEHPFVFTREVDEDGSCPAGQFCLD
PRTNDSEIIDRYFRHLSRESNASIPYEFRKCCYGYCIDLLEKLAEDLRFDFDLYIVGDGK
YGAWKNGRWTGLVGDLMSGAADMAVTSFSINSARSKVMDFTSPFFSTSLGILVRSKDTAA
PIGAFMWPLHWSMWVGIFVALHLTALFLTLYEWKSPYGMTPHGRNRKKVFSYSSALNLCY
AILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEELSGIHDAK
LHHPSHGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPTTPDGVANLKTDPPQLDAFIM
DKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPFTSNVSEFISRYKSDGFMDMLH
DKWYKVVPCGKRVFAVTETLQMGINHFSGLFVLLSVGVSGALLTLAGEHAFYRLILPHIR
KRNKFKYWLHTSQKIHRALNMSFEDVKNQKQPKTEKSCNLQRVQPPQPPPPPAKWNNEKN
KSAQESRDNKRVHFNLETLNSSRLLAQVVAAGREGAVTKEAARPCENGCSSCSGTSPPSP
RNTELVELESRIEEIRGQLRAALARKSELQFCLARERECPMPAPLPLQPTTTEEEKAAKE
SNADR
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggatggatttgtttccaagatctttgcatacttacacttgatgcacatctgtatcaac
tccagtcactcccaccctcagccctgtcatatcctggctcaaatcgggcacacggtgcgc
ctgggtgcgcttatgcccacccgtcagccagcaagggtccagggatccctgaaccgcgcc
ctcagcagcctctctcaaactcgaggcaacaatctcctgccttacaacctgagcctggag
ctggtgtacggggagccgctggacggagaccccgagtccctgttcaggtgtgtctgtcag
gcgatcgcggtgcggggggtctccgcagtgttggccttcccccagactcccgaggagctc
attcaagtggaatttctgtcttcgtttcttgaaatcccgtttataagtatcatggagcac
ggggagccactggacaccgggagtcccttccacctgcagatgttgacccgcagcccctgg
tcctctctggcagagctcttactgagcgtgctgcaggctgctggctggagggagggcacg
gccctgctgtgtggaggctgggaggaggccccagtgctggactggctgagccgtcaccct
ttgtcctggcagctggaagcggtactggacctgacccaggtggcagaggagcagggggga
atattccacttcctgtccaagcacttccgctccctaggcctgaagactctgccccattcc
tcctccgtcctgctgttcggtgcggatccccagtgcatctcggcagtgctccactctgcc
caggagctgggcctcaccctccctgcagtgcactggctgctgggacagcctctcacccct
gaggtgctccacaccctcggcctgcccttcggcctgctcgcctatggggaggtgaaccaa
aaacctctggacttctacatccaggacgccgtggagctggtgaccagggctgtgtccgcg
gctgcagcagtgtggccggaccgggcccttatccagagcatggtcaactgctatgacaag
aggagccaagagagggcgccatcttctgggcaatacctggccaggttcctggctgacacc
tccttcaacggacagacaggccctgtagccgtagggaactcctcccgggtgctgacctca
cccctcttccacatctggagcctgcagagggacccactgggccagccgacctgggtgacg
gtgggcaactggaagagaggacggctggtggtggaggagcagggcttctggcaggtcagg
ggtttacgcaggaggtcaggaatgggaggggggccagggagccggggggtgaggggagac
gggacctgggggagctctcggacccggctgcgtgtcgtcactttggtggagcatcctttc
gttttcaccagggaggtggatgaagatggcagctgcccagctggccagttctgccttgac
cctcggaccaacgactcggaaatcatagacaggtacttccgacatctttcccgggaaagt
aacgcatcaatcccatacgagttccgcaagtgctgctatggctactgcatcgacttgctg
gaaaagctggcggaggacttgagatttgatttcgacctttacatagtcggggatgggaaa
tacggagcctggaagaatggccgctggaccgggctggtgggagatcttatgagtggtgct
gcagatatggcggtcacaagtttcagtatcaattcagcccggagcaaagttatggacttc
accagcccattcttctcaactagtttgggcatcctggttcggagcaaggatactgccgcc
cccatcggtgccttcatgtggcccctgcattggtcaatgtgggtgggcatcttcgtggct
ctccacctgactgccctcttcctcaccctgtacgagtggaagagcccctacgggatgacc
ccacatgggcgaaaccgcaagaaggtcttctcctactcctcagccctcaatctctgctac
gccatcctgttcggacgcactgtctccagcaagactcccaagtgctggaccggccgcttc
ctcatgaacctgtgggccatcttctgcctgctggtgctctccagctacaccgccaacctg
gctgccgtcatggtgggagagaagaccttcgaggagctctcaggaatccatgacgccaag
ctgcaccacccctcccatggtttccgctttggtaccgtccgggagagcagtgcagaggac
tacatgaagaagagcttccctgagatgcatgagtacatgagacgcttcaatgagcccacc
accccagacggtgtcgccaacctcaagacagatccgcctcagctggacgccttcatcatg
gacaaggctctgctggactatgaggtgtccatcgacgcagactgcaagctacttactgta
gggaagccctttgccatcgaaggctacgggatcggcctgccccagaactcccccttcacc
tccaatgtgtcggagttcatcagccgctacaagtcagacggcttcatggacatgctgcac
gacaagtggtacaaagtggtgccctgcgggaagagggtgtttgctgtcactgagaccctg
cagatggggatcaatcacttctcgggcctcttcgtgctgctcagcgtgggggtcagcggg
gctcttctcaccctggctggagagcatgccttctaccggctcatcctgcctcacatccgc
aagaggaacaagttcaagtactggctccacaccagccagaaaatccaccgcgctttgaac
atgagttttgaagatgtgaagaaccaaaaacaaccaaaaacagagaaaagttgcaacctt
cagagggtccagcccccccagccccctcctccccccgccaagtggaacaacgagaaaaac
aagagtgcccaggagagcagggacaacaagcgggtacacttcaacctagagaccctcaac
agcagccggctcttggctcaggtggtggcagcaggcagggagggggctgtgacaaaggag
gcagcgaggccctgcgagaacggctgctcttcctgctcgggcacctcacccccctcaccc
cgaaacaccgagctggtggagctggagagccgcatcgaggagatccgtgggcagttacgg
gccgcactggcgcggaaatcagagctgcagttctgcttggcgagggagagagagtgccca
atgccagccccgctccctctccaacccaccaccacagaagaagaaaaagcagctaaagag
agcaatgcagacaggtga
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