Acipenser ruthenus (sterlet): 117966362
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Entry
117966362 CDS
T07327
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117966362
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117966362
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117966362
NCBI-ProteinID:
XP_034768186
LinkDB
All DBs
Position
40:complement(3820536..3849007)
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AA seq
1147 aa
AA seq
DB search
MSWIKKDVSAGVTDSMKKKGSRSGASSTVAAAAASPGCFAFATAAIHSGLGSKPGAGGSA
SVMDEEEEGEEEPGLQPQPRRGDCRGSGGGDSIRLRNIIPGGGAAPAGSNSSSNNKLCLL
QGEGAASSAASLAASRTTPACQGDAVGCAGGVGGRGGGGDSTTAVLAAAAETSTSRSNSA
ASTGTKCNKNGDCIRDQSTGSLSSIISKQDRQQGRGGGGEERKKQGASPKTSATSMEGAT
TTTTTTTTASSLNQGQGDEQPPAPAVVPEKREPKVSFSNAPSRKASSSVYGQNQSQAPPQ
PQQDDQPRNSVTVLKSDEFAQILADDGDPGGSQGSFMQRQFGAMLQPGVNKFSLRMFGSQ
KAVEKEQERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKDETTAPWII
FNVVSDTFFLTDLVLNFRTGIVNEDNTEIILDPRKIKKKYLKSWFLVDFVSSIPVDYIFL
IVERGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMR
IFNLIGMMLLLCHWDGCLQFLVPMLQEFPSDCWVSLNKMVNDTWSELYSFALFKAMSHML
CIGYGRQAPESMSDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQY
MSFHKLPADFRQKIHDYYEHRFQGKMFDEESILEELNEPLREEIVNFNCRKLVASMPLFA
NADPNFVTAMLTKLRFEVFQPADYIVREGTIGKKMYFIQHGVVSILTKGNIGMRLSDGSY
FGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKK
NSTLMHKVQHDLSSGVFNNRENEMIQEIVKYDREMVQRVELQRPRAMSMTPPLHGAMFGY
PGQPQSSSAIATLQQAVAMSFCPQMVSPLVGPGVLQSPRMVRRFQVVQSISSPVSVSPLQ
SQQMSAGALASAVSSPPVQSPLAAGGRTFQYSSSPGQSGSQLSLVQQRAPSPPQRPAAHK
STQALHTGSLSQEARLLSASQPSLPQNGFQAAAAAPSPPQSTRVSSTSIGPPQVHPGTPG
SSGLRGPQRAVLPHQMSVGLGGVIYPSTPPPAGASPMGHQDSGTPKKDSVVSIPDTDLVK
SRLSSNL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggataaaaaaagacgtttctgctggagttacagatagcatgaaaaagaaaggg
agccgcagcggcgcctcttccaccgtcgctgctgccgctgccagccccggctgctttgcc
tttgctaccgctgccatccactcgggattgggttcgaaaccgggcgcaggcggcagcgct
agtgttatggacgaggaggaggaaggcgaggaggaacccgggctgcagccgcagccacgc
cggggagattgccgaggcagtggcggtggagacagcatcagactgaggaacatcatacca
ggagggggagccgcgccagcagggagcaacagctccagcaacaataagctgtgcctcttg
caaggcgaaggagctgcgtcgagtgctgcctctcttgctgcttctcgcacgacccctgct
tgccagggtgatgctgttggctgtgctgggggagttggtgggagagggggaggaggggac
tcaaccacagctgtgctagcagcggcagccgagaccagcactagcaggagtaacagtgcc
gctagcacgggcacgaaatgcaacaaaaacggagactgcatccgagatcaaagcaccggg
agcttgtcttccatcatctctaagcaggacaggcagcagggaaggggtggaggaggagaa
gagagaaaaaaacagggtgcttcccccaaaaccagtgctaccagtatggaaggggcgacc
accaccaccactactaccaccactgcatcctcattgaatcagggtcagggtgacgagcag
ccccctgcccccgctgttgtcccggagaaaagggaacccaaggtgtccttttccaatgcg
ccaagcaggaaagcgtcctcgtccgtgtacggccagaatcaatcgcaggcgccaccgcag
cctcagcaggacgaccagcccaggaattctgtcaccgttctcaaatccgacgaattcgcc
cagatcttagccgacgatggggatccaggaggcagccaggggagcttcatgcagcggcag
ttcggggccatgctgcagcccggagttaacaaattctccctgcggatgttcgggagccaa
aaggcggtggagaaggagcaggagcgggttaaatccgccggggcttggatcatccacccg
tacagtgatttcaggttctactgggacttcacgatgctgctgttcatggtggggaacctc
atcatcatccccgtggggatcaccttcttcaaagacgagaccaccgcgccctggattatc
ttcaacgtggtctcagataccttcttcctcacagacctggtgctgaacttccgcacgggc
atcgtcaacgaggacaacaccgagatcatcctggacccccggaagatcaaaaagaagtac
ctgaagagctggttcctcgtggacttcgtctcctccatccccgtggattatatctttttg
atcgtggagagggggatcgactccgaggtctacaaaacggcccgggcgctgaggatagtc
cgcttcaccaagatcctcagcctcctgagactgctgcgtctctccagactcatccgatac
atccaccagtgggaagagatcttccacatgacctatgacctggcgagcgcagtgatgcgg
attttcaacctgatcggcatgatgctgctgctgtgccactgggatgggtgcctgcagttt
ctcgttcccatgctccaggaattccccagcgactgctgggtctcactgaacaagatggtg
aacgacacgtggagtgagctgtactccttcgcactcttcaaggccatgagtcacatgctg
tgcatcggctacggccggcaggcgcccgagagcatgtctgatatctggctcaccatgctc
agcatgatcgtgggcgccacgtgctacgccatgttcatcggccacgccacggcgctcatc
cagtcactggactcctcgcgccgccagtaccaagagaagtacaagcaagtggagcagtac
atgtccttccacaagctgcctgccgacttccgccagaaaatccacgactactacgagcac
cgcttccaggggaagatgtttgatgaggagagcatcctggaagaactgaacgagccgctg
agagaggaaattgtgaactttaactgccggaagctggtggcgtcgatgcccctgtttgcc
aacgcggaccccaacttcgtgacggccatgctgaccaagctacgcttcgaggtgttccag
cccgcggactacatcgtccgagagggcaccatcggcaagaagatgtacttcatccagcac
ggcgtggtcagcatcctcaccaagggaaacatcggcatgaggctctccgacgggtcctac
ttcggagagatctgcttgctgacacgaggacgccgcacagccagcgtccgggctgacacg
tactgccgcctctactccctctccgtggacaacttcaacgaggtgctggaggagtacccc
atgatgaggagagccttcgagaccgtggccatcgatcgactcgaccgcataggtaagaag
aactccaccctgatgcacaaggtgcagcacgacctcagctcgggcgtcttcaacaaccgc
gagaacgagatgatccaggagatcgtaaagtacgaccgcgagatggtccaacgggtggag
ctgcagcggcccagggccatgtccatgacgccccccctccacggggcaatgttcggctac
cctggtcagccccagagcagctctgccatcgccacgctgcagcaggccgtagccatgagc
ttctgcccccagatggtcagccctctcgtggggccgggggttctccagtccccccgcatg
gtccggcgcttccaggtggtgcagagcatctccagccccgtctcggtgtctcccctccag
tcccagcagatgtcagccggggccttagcttcggccgtctccagcccgcctgtccagagc
cccctggcggccggagggcgaactttccagtacagctccagccccggccagtctggttcc
cagctctccctggtccagcagcgtgccccgagccctccccaacgcccagccgcccacaag
agcacccaagccttgcacacgggcagcttgagccaagaggccaggctgctctccgcttcc
cagccctccctcccccaaaacgggttccaggcagcagcagcagcccctagcccaccacag
tccacccgggtgtcgtccacctccatcggccccccgcaggttcaccctggcaccccgggc
tcctccgggctcagggggccccagagggcagtcttgccccaccagatgtcagtagggcta
gggggggtcatctacccctctacaccgccccctgctggggcttcacccatggggcaccag
gactcaggaacacccaagaaggattcggtagttagcatcccagacacagacttggtcaaa
tctaggctctcttccaatttgtga
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