Acipenser ruthenus (sterlet): 117966499
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Entry
117966499 CDS
T07327
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04140
Autophagy - animal
arut04148
Efferocytosis
arut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117966499
04148 Efferocytosis
117966499
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117966499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117966499
Membrane trafficking [BR:
arut04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117966499
Hops complex
117966499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
zf-ANAPC11
zf-RING_5
Beta-prop_EML_2
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117966499
NCBI-ProteinID:
XP_034768477
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Position
42:4372506..4380991
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AA seq
930 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDPGDAGKGFTLPAGISACDSGRGHIVLGDMEGQIWFLTRSM
QPTPFQAYKLRVTHLFQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFSAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTCPITGLAFR
QSGKITNLFIATLEKVLCYTLSLKEYPRVELDTHGCALRCTALTDPSQDSQFIVAGDECV
YLYQPDERGPCFGFEGQKLLVHWYRGYLLLLTRDCKTPNKSEFGSREASPSEKQLLTVYD
LDNKFIAYSAAFDDVIDVLAEWGSLYILTRDRRLCVLQEKDTQTKLEMLFKKNLFVMAIN
LAKNQHLDSDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIMTSESEVHFDVEIAIKVLRQA
GYYSHAVFLAEKHTHHEWYLKIQLEDLKNYQEALRYIGRLPFEQAESNMKRYGKTLMHHV
PEETTRLLKGLCTDYRPSRETPADRESLGHTLGNKANSEEFIAIFVNNPRELRAFLEHMM
DVEAQSPQGVYDTLLELRLQDWAHEQDTQEKNSLQEAVLSLLKSENYSTVFDKALVLCQM
HNFKEGVLYLYEQGQLYQQIMHYHMQNEEYGKVVEACQRYGEKEACLWEQALGYFARKEE
DCKEYITAVLQHIDRNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQQESEQISEDERK
IREYRVETTQLRQEIEELRSSAKIFQKTKCSMCNSPLELPSVHFLCSHSFHQHCFESYAE
SEAECPTCAPDNRKVMDMLRAQDQKRDLHEHFHRQLKCSNDGFSVVADYFGRGVFNKLTL
ITDPPGGKAGAASLDSDLQRDLLIHTKRTV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtttctgcagtggagacggttcgtgttctttgataaggagacggtgaaggat
cccggtgatgccgggaaaggctttaccctccctgccgggatatcggcgtgcgactccggt
cggggacacatcgtactgggagatatggagggtcagatttggttcctgacgcgctccatg
cagcccacccccttccaggcttataagctgcgtgtcacccacctgttccagcttaagcag
cacagcatactggtgtcagtggggcaggacgaacagggcatcaaccctctggtgaaggtg
tggaatctagacaaacgggacagcgggaatcctctctgcacccggatcttctcagccatt
cccgggaacaagcccacggaggtgtcctgcctgagcgtgcacgagaacctcaacttcatg
gccatcggttttaccgatggcagtgtggtgctgactaaaggagacatcaccagagaccgg
cacagcaaaacactgacgctgcacgagggcacctgcccaatcacggggctcgctttccga
cagtctggcaaaatcacaaacctgttcatagccaccctggagaaagtgctgtgctacact
ctctccctgaaggagtaccctcgcgtggagctggacactcatggctgtgccctgcgctgc
acagccctgaccgacccgtctcaggactcccagttcattgtggccggggacgagtgcgtc
tacctgtaccagcccgacgagcgcggaccctgctttgggttcgaggggcagaaactgctg
gtgcactggtaccgcggctacctgctgctgctcacccgcgactgcaagactcccaacaag
tctgagtttggcagcagggaggcctctccctcggagaagcagctcctcactgtctacgac
ctggacaacaagttcatcgcctacagcgcggctttcgatgacgtcatcgacgtgctggcg
gagtggggctcgctgtacatcctgacgcgggaccgcaggctgtgcgtactgcaggagaag
gacacgcagaccaagctggagatgctttttaagaagaacctgtttgtgatggccattaac
ctggcaaagaaccagcacctggacagtgatggcctgtctgagatcttccggcagtatgga
gaccacctgtatgtgaagggggaccacgatggagccatacagcagtacatccgcaccatc
gggaagctggagccctcctatgtgatccgtaagttcctggacgcgcagcggatccacaac
ctcactgcgtacctgcaggctctgcacaggcagtccctggccaacgctgaccacaccacc
ctgctgctgaactgctacaccaagctgaaggacagctccaagctggaggagttcatcatg
acgagtgagagcgaggtgcactttgacgtggagattgccatcaaggtgctgcggcaggcg
gggtattacagccacgctgtcttcctggcagagaaacacacccaccacgagtggtacctg
aagatccagctggaagacctcaagaactaccaggaggcgctgcgctacatcgggaggctg
cccttcgagcaggcggagagcaacatgaagcgctacggcaagacgctgatgcaccacgtg
ccagaggagaccacgcggctgctcaagggactctgcacggactacagacccagcagagag
accccagcagacagggagagcctgggccacaccctggggaacaaggcgaactcggaggag
ttcatcgcgatctttgtgaacaatccccgtgagctgcgtgcgttcctggagcacatgatg
gacgtggaggctcagtctccccagggcgtgtacgacaccctgctggagctgaggctgcag
gactgggcccacgagcaggacacacaggagaagaattctctacaggaggctgtcttgtcc
ctgctcaagagtgagaactacagcacagtgtttgacaaggcgctggtgctctgccagatg
cacaacttcaaagaaggggtcctgtacctgtatgagcaaggccagctgtaccagcagatc
atgcactaccacatgcagaacgaggagtacgggaaggtggtggaggcgtgccagcgctac
ggggagaaggaggcctgtctgtgggagcaggcgctggggtactttgcccgcaaagaggag
gactgcaaggagtacatcaccgccgtgctgcagcacatcgaccgcaacaacctcatgccc
cccctgctggtggtgcagacgctggctcacaactcgacggccactctgtctgtgatcaag
gactacctgatcaacaagctgcagcaggagagcgagcagatctcagaggacgagcgcaag
atccgggaataccgcgtggagacgacccagctccggcaggagatcgaggagctgcgcagc
agtgccaagatcttccagaagaccaagtgcagcatgtgtaacagccccctggagctgccg
tccgtgcacttcctgtgcagccattcgttccaccagcactgcttcgagagctacgccgag
agcgaggccgagtgccccacctgcgcccccgacaaccgcaaagtgatggacatgctgcgg
gcgcaggaccagaaacgagacctgcacgagcacttccaccgacagctcaagtgttcgaat
gacgggttctcggtggtggctgactatttcggccggggggtctttaacaagctgaccctg
atcacggaccccccaggggggaaggcgggggctgcgagtctggactccgacctgcagaga
gacctgcttatccacaccaagaggaccgtgtga
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integrated database retrieval system
