Acipenser ruthenus (sterlet): 117966976
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Entry
117966976 CDS
T07327
Name
(RefSeq) zinc finger protein GLI1-like isoform X1
KO
K16797
zinc finger protein GLI1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117966976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117966976
Transcription factors [BR:
arut03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117966976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
FOXP-CC
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
117966976
NCBI-ProteinID:
XP_034769867
LinkDB
All DBs
Position
47:3106269..3161621
Genome browser
AA seq
1421 aa
AA seq
DB search
MPVDMQPHQGRYRYEPGPSQPARGLTPSGSPVYSDVSLIRMSPHRSQPGESQALFHPNSH
AFVEPYMRPPHRQIPPSMLANRGVATAHGGNGGTYYHQNNLMASHHGFGLNQAGGEHLSS
MDVSRFSTPRSMMKLSKKRALSISPMSDASIDLQTMIRTSPNSLVAFINSRCGSTTGSYG
HLSVGAMSPSMGFPGSMSHAKGPGSSFGHGPPLSHPPGPCHPAFRHPATPSLLPHNKHCH
MKTEPLGSVKGMEDRSECDVPSPSSAGTQDPLMGLLDGRDDLEKEDGKQEAEVVYETNCH
WEGCTKEFDTQEQLVHHINNEHIHGEKKEFVCHWQDCSREQRPFKAQYMLVVHMRRHTGE
KPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEACNKAFSNASDRAKHQNRTHSN
EKPYVCKILGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRPLGAGLPPSGQGQE
LHMEKEEGKREDCKLMVPDNTLKSQPSPGGQSSCSSERSPLGSANNNDSGVEMNANAGGS
LEDLSTLEDVPCVESAGTAGMSAQALKRLENLKIDKLKQIRRPTPPTRNVKLPAIPGNQG
EMLSMCGPSPMLSNRRVRELSNNDLVSMNQLTDRRNSSTSSISSAYTVSRRSSVVSPYLS
SRRSSDVSQVSGHPQNIGDPLSPESTRRAGEARQCGGGLPGLANLTPAQQYSLKAKYAAA
TGGPPPTPLPNVDQPGARMGFMNDYHGQPMPPFQHHGIQRRNSANEYSSYGTGIIHPHQA
PGNTIRRASDPVKSGVDQQAVAKVQRFNSLTNMSMSLMGRRNATTSTLQHFGGSEANVAR
HIYSPRPPSITENVMLEAMASMENPAATQPRDPNLMMPTDGMGQYMGYHQGSNLSPNHEP
LNCNEQGYQAAGVHHQNMYHSQRTDMGNQQVRQVEAMRQGGMASNMIQQPEYGMNQCQLS
PSSQHFPNLLQMNASENLAGQWGEPSPGSMDHSHQNHPHAMPNMMSGGQYTGSAMQHPGH
PRSSMPNNSHTQPTMFTNQKVMHQQTIKPEQQFHQSLSTLNPCQNMKQQQPMAPQQTFDR
SSQMVRPSGMSCEFQGQLDTQQASFSVGMTAGMLGSPVQEGRRSQTPMMQVKEMMVRNYV
QSQQALMWEQQQKNEMPPPADSMDLGSQGQIMQHSPHSQPYMSPNYINYQQPSQQQANLM
SPVSHSGSVQSKDMLSPNSQCYSHDMVPRPPQGRKPISRQNSMTHQQGYLDSPPQLSPGH
ESSTSPRRTVQLPQVQPHQELSTSNNSTIYYSGQIQMHHPDISKQLARQNSQQGSCVNQQ
INQMDQMKPGSLAYPEMGQMSSALDNLDLENAQIDFAAILDDADHSALMPGPNGIHSSSH
TSSRLTTPRNSVTLQSGLSNMDMASIMTSLTGENKFLNTMS
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgacatgcagccccatcagggccggtatcgctacgagcctggccccagtcag
cctgccaggggcctcacaccgtctggcagtcctgtgtactctgatgtgtctctgatcagg
atgtctcctcatcgctctcagcctggggagagccaggccctgttccaccccaacagccac
gccttcgtggagccctacatgaggccacctcacagacagataccccccagcatgctggct
aaccgaggcgtggcaacagcacatggtgggaatggagggacctactaccaccagaataac
ctgatggccagtcaccatggctttggcttgaaccaggctgggggagagcacctgagctct
atggatgtgtcgcggttctccacgcctcgctcgatgatgaagctcagtaagaagcgagcg
ctctccatctctcccatgtcagacgccagcattgacctgcagaccatgatccgcacctcc
cccaactccctcgtcgccttcatcaactcccgctgcggctccaccaccggctcctacggg
cacctctctgtgggggccatgagcccgtcaatgggattcccaggctccatgagtcatgcc
aagggtccgggctcctcgttcgggcacggcccgcccctcagccacccccctgggccctgc
caccctgccttcaggcacccggccacccccagcctgctgccacacaacaagcactgccac
atgaagacggagcctctgggcagtgtgaagggaatggaggacaggtctgagtgtgacgtt
cccagcccctcctctgcaggcacacaggaccctctgatgggactcctggacgggagggat
gacctggagaaggaggacgggaagcaggaggctgaagtcgtgtatgagaccaactgtcac
tgggagggctgcaccaaggagttcgacacccaggagcagctggtgcatcacattaacaat
gagcacatccacggggagaagaaggagtttgtgtgtcactggcaggactgctcgcgggag
cagaggcccttcaaagctcagtacatgctggtggtgcacatgaggagacacactggagag
aagccacacaagtgtacttttgagggctgtaataaggcgtactcccggcttgagaatctg
aagacccacctgcgatcacacacaggggagaaaccgtacgtgtgtgaacacgaggcctgc
aacaaggcattctccaacgcctcggaccgagccaagcaccagaaccgcacccactccaac
gagaaaccgtacgtgtgtaaaatcctgggttgcaccaagcgctacactgaccccagctcg
ctgaggaagcacgtcaagaccgtgcatgggcccgaggctcacatcaccaagaaacaccgc
ggagacacgggcccccggccccttggagcagggctgcccccctctggacagggccaggaa
ctgcacatggagaaggaggagggcaagagagaggactgcaaactgatggtgccagacaat
acactgaaatctcagcccagtcctggtggccagtcctcgtgcagtagcgagcgttcgcca
ctggggagcgccaacaacaacgacagcggggtggagatgaacgcgaacgctgggggcagc
ctggaggatctctccaccctggaggacgtgccctgcgtggagtcagcgggcacagcgggc
atgtccgcccaggcccttaagcggcttgagaacctcaagattgacaagctgaagcagatc
cgcaggcccaccccacccactcgaaacgtcaagctgcccgccatcccgggtaaccaggga
gagatgctgtccatgtgcggcccgtctccgatgctgtctaatcggcgggtgagggagctg
tccaacaatgacctcgtgtccatgaaccagctgaccgatcggaggaacagcagcacaagc
agcatcagctccgcctacacggtcagccggcggtcatctgtcgtctctccctacctctcc
agccgtcggtccagcgacgtgtcccaggtcagcggacacccccaaaacataggcgacccc
ctctctcccgagagtacccgcagggcgggagaggccaggcagtgcgggggaggcctgccc
ggtttggctaaccttaccccagcacagcagtacagcttgaaggccaaatacgcggctgcc
actggaggtcctccccccacccccttacccaacgtggatcagcccggggcaaggatgggt
ttcatgaatgactaccatggtcaacccatgcctccattccagcatcacggaatccaacgc
aggaacagcgccaacgagtacagcagctacgggacgggcatcatccaccctcaccaagcg
cctgggaacaccatccggagagccagtgacccggtgaagtcaggggtcgaccagcaagca
gtggccaaagtccagcgtttcaacagcttgaccaacatgagcatgtccctgatgggaaga
agaaacgccaccacctccacactccagcatttcggagggtcggaagccaacgttgctagg
cacatctactccccacggccccctagcatcacagagaatgttatgctggaggctatggcc
agtatggaaaaccccgctgccacccagcctagggatcccaacttgatgatgcccaccgat
ggtatggggcagtatatgggttaccaccaggggtcgaacttgtctcctaatcacgagcct
ttgaattgcaacgaacaaggctatcaggcagcaggggtgcatcatcagaatatgtatcac
agccagcgtacagatatgggcaaccaacaagtcaggcaagttgaggccatgcgccaagga
gggatggcaagcaacatgattcaacagccagagtatggaatgaaccaatgccagctgagt
ccttccagtcaacacttccctaacctcttgcagatgaatgccagcgaaaacctagcaggc
cagtggggagagcctagcccaggcagtatggaccactcgcatcagaaccacccgcatgca
atgccaaacatgatgtcaggcgggcagtatacaggttctgccatgcaacacccaggccac
ccaaggtcaagcatgcccaacaacagccacactcagccaaccatgttcaccaaccagaag
gtcatgcaccagcagaccatcaaaccagagcagcagttccaccagtccttgtcaaccttg
aacccctgtcagaatatgaagcagcagcagcccatggcacctcagcagacttttgaccgg
tcttctcagatggtacgtccaagtggtatgagctgcgagttccaaggccagctagacacc
cagcaggcttccttctccgtgggcatgacggctggcatgcttgggtctcctgtacaggag
gggagaaggtctcagacccccatgatgcaggtgaaggagatgatggttcggaattacgtg
cagtcccagcaagccctgatgtgggaacagcagcagaaaaacgaaatgcctccgccagca
gacagcatggacctgggcagccaaggccagatcatgcagcacagcccccattcccagcct
tacatgagtcccaattatatcaactaccagcaaccatcacagcagcaggctaacctgatg
agcccagtgtctcacagtggatcagtgcagtctaaagacatgctgagccccaacagccag
tgctacagccacgacatggttcccaggcctccacaaggaaggaaacccataagccggcag
aacagcatgacccaccagcaagggtacctagacagcccccctcagttgagcccgggccat
gagtcttccaccagccctaggagaaccgtccagcttcctcaagtgcaaccccatcaagaa
ttgagcaccagcaacaacagcacaatctactattccgggcagatacaaatgcatcacccg
gatataagcaagcagctcgccaggcaaaactcccagcaggggagctgcgtgaaccagcaa
atcaaccaaatggaccaaatgaagccaggatccttggcttatcccgagatggggcagatg
tccagcgcccttgacaacttggatctggagaatgcccagatagactttgcagccattcta
gacgatgcagaccactctgccttgatgcccggtcccaatggcatccacagctcgtcccac
acgtcctcccgtctcaccacgccaaggaactctgtcactctccagtcagggctgtccaac
atggacatggcatccatcatgacttcactaacgggggaaaacaagtttctcaacaccatg
tcttag
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integrated database retrieval system
