KEGG   Acipenser ruthenus (sterlet): 117967912
Entry
117967912         CDS       T07327                                 
Name
(RefSeq) transcription factor Sox-19b-like isoform X1
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:arut03000]
    117967912
Transcription factors [BR:arut03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    117967912
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp HMG_WDHD1
Other DBs
NCBI-GeneID: 117967912
NCBI-ProteinID: XP_034771259
LinkDB
Position
56:790105..800877
AA seq 296 aa
MYSMMEHELKSPGPPPSHHPGSGMSPVGSGVGGNHPGAKGACPPGSDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYK
YKPRRKSKPLLKKDNPAGKYPLSAGNLLAVAAAQGPGGSPRMDSYGWGPTGGYAGMQSEA
LGYPQQLHRYELSTLQYPPGMATAQSYMSGANSYSPMSYGGNAQQASSVMSMVKPEPVSH
SPTGAPSHHRGGLQGDLRDMISMYIPSNDTTDPAGQRGYSSVQQHYLNGTVPLTHI
NT seq 891 nt   +upstreamnt  +downstreamnt
atgtacagtatgatggaacatgagttaaagtcaccggggcctccgccgtcccatcatccc
ggctcgggcatgtcacctgtcgggagcggcgtgggaggtaaccatcccggggcgaagggt
gcttgccctcccggcagcgaccccatggacaaagttaagcgacctatgaacgccttcatg
gtgtggtcccggggccagcgacgaaaaatggctcaggaaaaccccaaaatgcacaactca
gagattagcaaacgactaggcgccgagtggaagctactgacagacgctgaaaagcgacct
ttcatcgacgaggccaagcgcctgagggcgctgcacatgaaggagtaccccgactacaag
tataagcccaggcgcaagagcaagcctctcttgaagaaggacaacccggctggcaagtac
cctctctcggccggcaacctgcttgcggtggcggcggctcagggacccggagggagtccc
agaatggacagctacggctggggccctactggggggtacgcgggcatgcagagcgaggcc
cttgggtacccccagcagctacatcgctacgaactgtcgaccctgcagtacccccctggc
atggccacagcacagagttacatgagcggagcaaattcctacagccccatgtcttacgga
ggaaacgctcagcaggccagctctgtgatgtcaatggtaaaacccgagccggtgtctcac
tcccccactggggcccccagccaccaccgagggggcctgcagggggacctgagagacatg
atcagcatgtacatccccagcaacgacacgacggaccccgcaggacagaggggctacagc
agcgtacagcagcactacctgaacgggactgtacccctgacacacatctga

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