KEGG   Acipenser ruthenus (sterlet): 117968257
Entry
117968257         CDS       T07327                                 
Name
(RefSeq) protein SMG5-like
  KO
K11125  protein SMG5
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117968257
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117968257
   03032 DNA replication proteins [BR:arut03032]
    117968257
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     117968257
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117968257
DNA replication proteins [BR:arut03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    117968257
SSDB
Motif
Pfam: EST1_DNA_bind EST1 PIN_4
Other DBs
NCBI-GeneID: 117968257
NCBI-ProteinID: XP_034771759
LinkDB
Position
Unknown
AA seq 1085 aa
MSGPGQDSEPEAKVLHTKRLYRAVVESVHKLDLIISNKSSYREVFKPENISLRNKLRELC
VKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHVHSRSALECAYRTHLIAGVGFYQ
HLLLYIQSHYQLELQDCIDWTHVTDPLIGRKKAVSATAKEMDWAQMACHRCLVYLGDLAR
YQNELAGVEAELLAERFYHQALSVTPHVGMPFNQLGTLAGSKYYNVEATYYYLRCIQSEM
PFEGAYGNLKRLYDKAAKMYHQVKKQEMKKLSPTKQRSKDVKRLLVSFMYLQSLLQPKNS
LLESELTSLCQSVLEDFNLVLFYLPSASHSSSGCEEEEDHESRYSFVPDVLVFRMVVTCL
MVVHNLKRAGSKQYSAAIAFTLAMFSHLVNHVNIHLQAELEEGESGVPVLHTDDLEVKDG
VTLTPEEGTLQNGTAEEEEEEEEEERSGKGADGQKKPSNSTDKTKKSGKKKYSRLSRLRR
RRYDGKEDESDLSEGFESEGERGGRVGGRRVGAAVVSTAITRAKHKGADWDSGSEKSEED
YEEEEAETAFDVETDSDMNSQESRSDLEDIEDEKTEIAGVPDSLDSVDSKPLEKAEPSPA
VNGPTPSSSGSDSSIASNLQAMSSQLFQTKRCFRLAPTFSNVLLRPCSAPEASGGGSSPQ
PTALDQTPLTSSNPSANPSHCQPCLFCATDGGSDSEGSVESNQSCRNEKTLLERLEILTN
QGLLPAVKVFLDWLRANTDIIVMCAQSSQSLWNRLSVLLNLLPDSRKILEAEVPLCEEVS
ELLSACERPDLQQTLLLPEDVALRHLPALRAAHKRLDMERESPTLSTLQESVVRLSCIRS
FGHFLTRLQGNVLHFNPEAGIFTSVSQSEQENLLQQARAQFRMAEEEARRNRLMRDMAQL
RLQLEVSQLEGSLQQPKAQSSMSPYLVPDTTALCQHLGLIRQLAGSGRFIIIIPRTVIDG
LDFLKKENAGARDGIRFLESEFRKGNRYIRCQRESGKSFERHKLKRQDSDAWHLYKMVDS
CRQLTVSQGSGEEDTAGMVTILTGFHIEDVTTLSPHMQGALQAVSVAGIELKNILEFYKQ
WKEMG
NT seq 3258 nt   +upstreamnt  +downstreamnt
atgagcggccccgggcaggacagcgagcccgaggcgaaagtcctccacaccaagcggctg
taccgagcggtggtggaatcagttcacaagctggacctcatcatcagtaacaagtcatcc
taccgggaggtgttcaaacctgagaacatcagcctccgcaacaagctcagagagctgtgt
gttaagctgatgttcctgcaccccgttgattatgggaggaaggcagaagagctgctctgg
aggaaagtgtactacgaggttattcagctcatcaaaaccaacaagaagcatgtccacagc
cgcagtgctctggagtgtgcctacaggacccacctgatcgctggagtgggcttttaccag
cacctgctgctctacatccagtcccactaccagctggagctgcaggactgcatcgactgg
acccacgtcacagaccccctcatcggccggaagaaagcggtctctgctactgccaaggag
atggactgggctcagatggcctgccatcgctgcctggtctacctgggagacctcgctcgc
taccagaatgaactggcaggcgtggaggcagagttgctggctgagaggttttatcaccag
gctctgtctgtgactccacacgttggaatgccttttaaccagctggggacgctagcggga
agcaagtactacaacgtggaggcaacttactactacctgcgatgtattcagtcagagatg
ccgttcgagggagcttacgggaacctgaagcgtctctatgacaaggcagccaagatgtac
caccaggtcaagaaacaggaaatgaagaagctgtcccccaccaagcagaggtctaaagac
gttaaacggttgctggtgagcttcatgtacctgcagagccttcttcagcccaagaacagc
ctgctggagtctgagctgacgtctctgtgccagtcggtgctggaggactttaacctggtg
ctgttctacctgccctctgcctcgcactcctcctctggctgtgaggaagaggaggatcac
gagagccgctactccttcgtccctgatgtgctcgtcttcagaatggtcgtcacctgcctc
atggtcgtgcacaacctcaagagggcaggttccaagcagtacagcgctgccatcgccttc
acgctggccatgttctctcacctggtcaaccacgtgaacatccacctgcaggccgagctg
gaggaaggagagagcggagtcccggtgctgcacacggatgacctggaagtgaaagacggc
gtgacgttgacgccggaggaaggcacgctacagaatgggactgctgaagaggaggaggag
gaggaggaggaggagagaagtgggaaaggagcagacggccaaaagaaaccttcaaactca
acagacaaaaccaagaagagcggcaaaaagaaatactcccgtctctcccgcctgagacgg
cgccgatacgatgggaaagaggacgagagtgatctgagtgagggctttgagagcgagggg
gagagagggggtagagtggggggcaggagagtgggagcagctgtcgtctccaccgccatt
accagggccaaacacaagggagctgactgggacagtggctctgagaagagcgaggaagac
tatgaagaggaggaggcggagactgcgttcgacgtggaaaccgattcggatatgaacagc
caggagtcacgctctgatttggaagacatcgaagacgaaaaaacagagatcgcaggtgtt
cccgattcacttgacagcgtggattcaaaaccgctggagaaggcggagcctagcccagct
gtcaatgggcctacccccagcagcagcggcagcgactccagcatcgccagtaacctccag
gccatgtcttcccagctcttccagaccaaacgctgcttccgtttggctcccactttcagt
aacgtgctgctgcgaccctgcagcgctccagaggccagcgggggagggagcagcccccag
ccaacagcccttgatcagacccctctcaccagcagcaatcccagcgccaacccctcacac
tgccaaccctgtctcttctgtgccacagatggtggctcggattcggagggcagcgtggag
agtaaccaatcctgtcgcaacgagaagaccctactagagcgactggagatcctgaccaat
caagggctgctgccggctgtcaaggtcttcctggattggctgagagcgaacactgacatc
attgtcatgtgcgcacagagttctcagagcctgtggaacagattgtcggtgcttctcaat
ctccttccagacagcagaaagatactggaagccgaggtgcccttgtgtgaggaggtgtct
gagctcctgagcgcgtgcgagcggccggacctgcagcagaccctgctgctgcccgaggat
gtggcactgcgccatctgcctgccctccgagcagctcacaagagattggacatggagaga
gagagccccactctcagcaccctgcaggagtcggtggtgcgcctgtcctgcattcgcagt
ttcggtcacttcctgacccgtctccaaggcaacgtgctacacttcaacccggaggcgggc
atcttcaccagcgtcagccaatcggagcaggagaacctgctgcagcaggccagggcgcag
ttccgcatggcggaggaggaggcacgcagaaacaggctgatgagagacatggcacagctg
aggctacagttggaagtgtctcagctggagggcagtctgcagcagcccaaggcccagtcc
tccatgtctccctacttggtcccagacaccactgctctctgccagcacctggggctgatc
agacagctggcaggcagcggtcgtttcatcatcatcatcccgcgcacagtgatcgacggg
ctggatttcctgaagaaggagaatgctggagccagggacgggatccgctttctggagtcg
gaattccgcaagggaaaccggtatatccgctgtcagagggagtctgggaagagctttgag
agacacaagctgaagagacaggatagcgacgcctggcacctgtataagatggtggatagc
tgcagacagctgacggtgtcccaggggagtggcgaggaggacactgctggcatggtgacc
atcctcacagggtttcacattgaagacgtcacgacgctgtcgcctcacatgcagggtgct
ctacaagccgtgtcagtggctggaatcgaactcaaaaacatcctggaattctacaagcag
tggaaggaaatgggctga

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