Acipenser ruthenus (sterlet): 117969769
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Entry
117969769 CDS
T07327
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117969769
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117969769
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
Helicases
117969769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
117969769
NCBI-ProteinID:
XP_034773612
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MDAGRLQFHEMGLDDRLLKALADLGWAQPTLIQEKAIPLALDGKDLLARARTGSGKTAAY
AVPIIQHILSVKQSVTEQAVRALILVPSKELGQQVQKMIRELTAFCARDVRVVDISGQAE
LAAQRPILMEKPDIVVGTPSRVLAQLSARNLLLRSCLEMLVIDEADLVFSFGFESDLKSL
LCHLPKIYQAFLMSATFNEDVQSLKKLVLHNPVTLKLQGSQLPGSSQLTQYHIRCEEEDK
FLLIYTLLKLALVRGKTLIFIGTIDRCYRLKLFLEQFSIPACVLNSELPVHSRCHIIGQF
NQGFYDYIIATDEQSLEDPPVLPGGHGKKGKKKKAQGRGGKDKEYSVSRGIDFQNVANVI
NFDFPTTIESYIHRVGRTARADNRGTALTFVLHTQLPLLAEIEDALTAENADCALKPYEF
KMQEIEGFRYRCRDAMRSVTKQAVKEARLKEIKQELLNSEKLKTYFDDNPRDFQLLCHDK
ALHPAIIKPHLKNVPEYLIPPTLRGVAHPVIRKKRQRRTQGIAGGRETKKNFKQQHKKRN
PLKSFRYTGKQGQGKSGRGAKS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggatgctggcaggttacagtttcatgaaatggggctggatgatcgccttttaaaggcg
ctggctgaccttggctgggcacagcctaccctgatccaggagaaggccatcccgctggca
ctggatgggaaggacctcctggctcgagccagaaccggctctggaaaaaccgctgcctac
gctgtgccaatcatccaacacatcctctctgtgaagcagtcggtgacggagcaggcagtc
cgagccctcatcctggtccccagtaaggagttgggacagcaggtgcagaagatgatccgt
gagctgactgccttctgtgccagggacgtgcgtgtggttgacatctccggccaggcggag
ctcgccgcacagaggcccatcctgatggagaagcccgatatcgtggtgggcactccctct
cgtgtgctggctcaactgagcgctcggaacctgctcctgcgcagctgcctggagatgctg
gtcatcgatgaggccgacctggtcttctctttcggctttgagagcgacctcaagagcctc
ctctgccacctgcccaaaatctaccaggctttcttgatgtctgccacgtttaacgaagac
gtccagtccctgaagaagctggttctgcacaacccggtgactctgaagctgcagggctcc
cagctgccaggcagctcccagctcacacagtaccacatccgctgtgaggaggaggataag
ttcctgctcatctacaccctgctcaagctggccctggtccggggcaagaccctcatcttc
atcgggaccattgaccgctgctaccgcctcaaactcttcctggagcagttcagcatccct
gcctgcgtgctcaactcggagctccctgtgcactccaggtgccacatcatcgggcagttt
aaccaggggttctacgattacatcattgccacggatgagcagagtctagaggaccccccc
gtcctgcccggggggcacggcaagaagggcaagaagaagaaagcccagggcaggggcggg
aaagacaaagagtacagcgtctcgcgagggattgatttccagaacgtggctaatgttatt
aacttcgacttccccacaaccatagagtcgtacatccaccgtgtcggcaggacagcccgt
gcggataaccgcggaacagccctgaccttcgtattgcacacacagctccccctgctggct
gaaatagaagatgccctcactgcagagaatgcagactgcgccctgaaaccgtacgagttt
aagatgcaggagattgaggggttcagatacaggtgtcgggatgccatgcgctctgtcacc
aagcaggctgtgaaggaggcccgtctgaaggagatcaaacaggagctgctcaactctgag
aaactcaaaacgtactttgacgataaccctcgagacttccagctactatgccacgataaa
gctctgcaccccgccatcatcaaaccccacctgaagaacgttcccgagtatctcatccct
cccacactgaggggtgttgcccatcctgtaatacgtaagaagaggcagagacgaacacag
ggcatagccgggggcagagaaacgaagaagaacttcaagcaacaacacaaaaagaggaac
cctctgaagagctttagatacacaggaaagcagggccaggggaagagtggtcgaggggcg
aagtcctag
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