Acipenser ruthenus (sterlet): 117969855
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Entry
117969855 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 15-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117969855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117969855
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117969855
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117969855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
TPR_MLP1_2
COG3_N
YkyA
EzrA
Nmad5
Motif
Other DBs
NCBI-GeneID:
117969855
NCBI-ProteinID:
XP_034773697
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MNQTRNRFDPRNSSPGGGLNGDLVGNILNQAGQNGGQHIPDTPSKTSKPSKESGGKENFY
KRTTQALAVLLLTTVTAGTGLHYSQMSRASTEYSSLLDSHTDLVQKLEGVKLDYSTLQER
YTAIEEQLTSVHDKFTSLQGAHSDLRSKLMSGIQKYLPQGDSILRSIQENVLEKLPVDLS
FNDNAESVEASSVAGYLEQGVELGSDDWVPVSEGRGLITGQDLTAEVKDDNSGSLISRAA
SFLSKLGVPAVVLSVFAYAFKKRGSIAGQLNNRLGEKTYQDSLSSKGNRFNDVLSENLVP
VNAQNQHSSFVSAVTDKLRNLKGSDMMKKLYDKSPFYRYFGARGDTKPLSTLEKPTPTYP
EHLEEPDSAYSSSFEKFAPVNSERFEKPAAVFSDRIDSVEARQQHSSVDSSKDQSPKDGV
VLDPYTAYPKLILSQDGKRLRLGDETRAVSDDNPERFDYWECAVGQEGFTSGRHFWEVDV
GENQHWKLGVARASAQRKGEFSMLPRDGYWTLWWYGDQLWALTDPLTSLAPGLKVQKVGV
SLVYDEGRLSFYDVESGTLLYTFTDVFTEKVYPFFWTWDTSTDLVIL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaacacgcaacagatttgatccgcggaactccagtccgggaggtgggcttaac
ggtgacctggtgggaaatatcctgaaccaagctggacagaacgggggacagcatataccc
gacacaccatcgaagacttcgaagccttcgaaagaatctggcgggaaagagaatttttac
aagcggaccacgcaagccctggccgttctgctcctcaccacagttacagcaggaaccgga
ctgcattattcccaaatgtccagggcgagcacggagtacagcagcctgctcgacagccac
acagatttggtgcagaagctagaaggggtgaagctggattactccaccctgcaggagagg
tacacggcgatcgaggagcagctgacgtcagtgcacgataagtttaccagcctgcagggg
gcgcactcggacctgcggagcaagttaatgagcggcattcagaagtacctcccacaaggg
gacagcatcctgagaagcatccaggagaacgtgctggagaagttaccagtggatctctcg
ttcaacgacaatgccgagtccgttgaagccagctctgttgcggggtacctggagcagggg
gtggagttaggttctgatgattgggtccctgtttctgagggaagaggactgataacagga
caagatttgacagcagaagtcaaagacgacaattcaggttcccttatatcacgggctgcc
tccttcctgtccaaactgggagttccagctgttgtcttatcggtcttcgcctacgccttt
aagaagcgcggcagcatagcaggccagcttaacaacagactaggggagaaaacatatcaa
gactctctgagctccaaagggaacaggtttaatgatgtgctttcagagaatttagtcccg
gtgaatgcgcagaaccaacacagttcatttgtgtcagctgttacagataaactgcgtaat
ctcaaaggtagcgacatgatgaagaaactgtacgacaagagcccgttttacagatatttc
ggtgctaggggagatacgaagccactgtctacactagagaaacccacgccaacttatcct
gagcatctcgaagaaccagactctgcctattcttctagtttcgagaagtttgccccagtc
aattcagagcgtttcgagaaaccagctgcggtgttttctgatcgcatcgactctgtggag
gccagacagcagcattcttcagtagattccagcaaggatcagtctccaaaagacggagtg
gttctggacccctacacggcgtaccctaaactgatactgtcccaggacggaaagcggctc
cgactgggcgatgaaacgcgggccgtctccgatgacaaccccgagaggttcgattactgg
gaatgtgccgtgggccaggagggcttcacctcagggcgccacttctgggaagtggacgtg
ggggagaaccagcactggaagctgggagtcgccagagcctctgcccagaggaaaggggag
ttcagcatgctcccccgggatgggtactggactctgtggtggtacggagatcagttatgg
gccctgactgaccccctgacatctctagccccggggttgaaggtccagaaggtgggggtc
agtctggtgtacgatgaagggcgactctccttttacgacgtagagagcggaactcttctc
tatactttcactgacgtcttcaccgagaaggtttacccatttttctggacctgggatacg
agcacagatcttgtcatactgtaa
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