Acipenser ruthenus (sterlet): 117971083
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Entry
117971083 CDS
T07327
Name
(RefSeq) uncharacterized protein LOC117971083 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117971083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117971083
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117971083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
Motif
Other DBs
NCBI-GeneID:
117971083
NCBI-ProteinID:
XP_034774955
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSRHRNVRGYNCDEDFDDNDICGQSTVDDYFISPATAAEFISSKHDKPSIFREPLEEEEE
ECGVEEQEVPAFSPSMNHEKLSEVDQARLYSCLDQMRQVLGDSVPDPILVKAVLKCRFDL
QKALDLILSEGGKKTSSTSNQNEISTGKAVKGDLVSSSKFGISKHDGSFKTPRALHNTET
SSSLDLSCLLAQLELPAVVLSDRLSSANLKMLCSDEGGSKTCQNNFLNLSLSELNNASFK
KTEHESTKSNSLGKTSLAQLISNHERDSQKGVNFTPLAFAGCATAVPKSKSEMSDPSLPQ
KVSLSATSAEMDPKYTAALGSLTDFNTPFPNTNCLPSSLGTLTQTSMQDPQQKPEAFGSL
HSVFQSTPLDITSRNNSYKTQHVGSPSLADLIQEHTKTSLSPYDTMCDSQVKPVAGEVSV
PLSFASLSLSQLASEHEAKTGSLPLTGTLSSLLTPVTTKAKEQENVCLSSLIADSVESAP
KTWLMNNKHDVLDSQPSVGLDLNVDLSMLIQKPPEAEMTKILLSKSKDQNISHSANNQSL
CKCKTGHVSKRRTMTVSWSKELSAKPSVFALALSVQYPPRGFRKQVLGIHKAFLYSKQMQ
VVKRKDQGPLFKIAPFDFQTPSPDDIIKAKQKKAFTR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacagaaatgtccggggttataactgcgatgaagattttgacgacaatgat
atatgtggacagtctactgttgatgactactttatttcaccggctacagctgccgagttc
atcagttccaagcacgacaagccctctatcttcagagagccccttgaggaggaggaggag
gagtgtggggttgaggagcaggaggtacccgctttttcacccagcatgaatcatgaaaaa
cttagtgaagtagatcaagctcggttgtattcatgccttgatcagatgcgacaggtcctt
ggcgactctgtcccagatcctattctggtgaaagcggttcttaagtgccggtttgattta
cagaaggccctggatctcatattatctgaaggcggcaagaagacatcaagtacaagcaac
cagaatgagatctctacagggaaagctgtcaaaggagacctagtttcttcatcaaagttt
ggaatttctaagcatgatgggtcatttaaaacaccaagggcattgcataatacagaaaca
tcatcttctttggatcttagctgtcttttagcacaacttgagttaccagcagttgtttta
agcgacagactttcctctgcaaaccttaagatgctctgttctgatgagggaggatcaaag
acttgccaaaacaatttcttgaatctttcactgtctgaactgaataatgcatcatttaaa
aaaacagaacatgagagcacaaaaagtaactcactggggaaaaccagtctcgcacaattg
atttcgaaccatgagcgtgacagtcaaaaaggcgttaattttactcctctggcttttgca
ggctgtgctactgcagtgcccaagagtaaatcagaaatgtcagatccgtcattgccacaa
aaagtgtcgctttcagctactagtgcagaaatggaccccaagtataccgctgccctgggt
agcctgactgattttaataccccctttcccaataccaactgcttgccttcctctctgggc
actttgactcagacaagcatgcaagatccacagcaaaaacctgaggcatttggcagtctc
cactcagtttttcagagcacacccttagatattactagcagaaataacagctataaaaca
cagcatgttggaagcccatccctggcagacctcatccaggaacatacaaaaactagtctg
agtccgtacgataccatgtgtgacagccaggtcaagccagtggcaggagaagtcagtgta
cctttgtcttttgcgtctctatcattgtcacagttagcttctgaacacgaggccaaaact
ggttctcttccactaacaggaactttgtcttcattactgactcctgtaactaccaaagcc
aaggagcaagaaaatgtgtgtctgtccagcttgattgcagacagtgttgagagtgccccg
aagacttggttaatgaataataagcatgatgtcctagactcgcagccctctgtgggattg
gatttgaatgtagatttgagtatgcttatccagaaaccacctgaagcagaaatgacaaag
atcttattgtcaaagtcaaaagatcaaaatataagccattctgctaacaatcaatcattg
tgcaagtgcaaaacagggcacgtgtctaaaaggcgaaccatgactgtctcttggtcgaaa
gaactaagtgctaaaccctcagtatttgccttggctttgtcagttcaatatcctcccagg
ggcttcaggaaacaagtgcttggtattcataaagcattcttgtacagcaagcagatgcaa
gtggtaaaaagaaaagaccagggacctctgtttaaaatcgcaccatttgactttcagaca
ccttctccagatgatattataaaagctaaacaaaagaaggcttttaccagataa
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