Acipenser ruthenus (sterlet): 117971373
Help
Entry
117971373 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: stabilin-1-like
KO
K19020
stabilin-1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117971373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117971373
Glycosaminoglycan binding proteins [BR:
arut00536
]
Hyaluronan
Cell surface receptors
117971373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
Xlink
FXa_inhibition
EGF_TEN
EGF_Teneurin
EGF_MSP1_1
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
117971373
NCBI-ProteinID:
XP_034775500
LinkDB
All DBs
Position
Unknown
AA seq
2526 aa
AA seq
DB search
MHAILSSSAQCAPLARPFLEYGVLQVPEGPPRLLESKAADLGEETLTLSGCSHTCEKDVT
EHKCCPGFWGPDCMPCPSKSGKPCNWKGTCMDGVTGNGTCICEAGFSGFACQECKDENVY
GPDCQLECDCVHGICSSGIGGNGSCICETGYAGVRCDQESQLCHGMDCGENSVCNEGAGG
TAVCGCMPGFQKTGQQCLPQDPCAQNVCDHNADCVNHGQRKYDCRCKEAYQGDGKVCVPV
NPCLIDNGGCPTNSTNCVYKSVGKTLCVCKSGMEGANPSAGCTLKDVCKKDSCDKSAKCV
TGLDGTASCVCKKGQISDGTFCYGNIIERILELNTESRHKGKLTSAINMFEKGCELALSK
RLFTVFVPASTFTVTGMSEKYLCKLHMIIGLHMFSDLQDKVFWTLGGEPVHFMADKSFSF
QRDQNKTYRILQSDLAAANGIIHIINQPVTNISPEHAENEQDSKKTIEEIIANQHKFSRY
QTLLENCEMSPILEGPGPFTVFVPTNEAVDQHRDGTIIYLLTDGKKKLQELVKHHIYTSA
SVTVDRLAAMPQILTKANQIITVNVTSDGRIVLGGKAVVLNQQDIVASNGIIHVIDEILI
PPSIVPILPHRCDVTEYNIVMGQCVDCSKLDTTSCPLGSTELDKFHKGCEYISSVMNIIT
NRRGCAKYCNKTVVRPDCCKGFFGPDCKACLGGFQNPCYQHGTCNDGIQGNGTCSCLPDF
QGIACHICSNPNKHGEMCDEDCKCLHGVCDNRPGSKGVCRINSCAEGYTGELCDRVTKPC
GPSGLSQYCHINAVCDYSDNTRCVCRNGYEGDGFSCQEMNPCQKADRGGCSANARCIYTS
PGNATCICNEGWAGDGQACVEIDNCLLNNRGGCHYNADCITQGPGQSECVCKKNYMGDGY
NCDIINPCLQSNGGCHSLAKCKPLGDGERECLCPEGYGGDGAICYGNILTELASNSNFFS
FYQWIKSSSLSNPEGNVTVLVPSENAIKGLKEEVREFWMKPYMLPFLVRVHFLEGAFTID
DLKQRGDVELSTLNPRTKWEVKDTSGTVMIQNASILISDIPAVNGFINVIDQVLIPSLAD
IPPPPPGLMQVLNQTTSFSLFKKALLHYNLTEKMDSSEKYTILIPFNKAIEDHLNATGSE
ELDEDSVRYHIIVEERLLPGNLRNGIHKSTMLGSSYQIMFHNNNENQTYANEVPLNGVFY
STRNGMLMGISQLLHIHKNRCDKNVTILTKGFCGRCDGNYRCPKRAIPLTHVADMAALKS
NCKYRKKNKKVDGCSYQCLTVTEDHNCCPGYFGLNCFKCPGKPGNWCSNNGICQDGVLGS
GDCLCKEGFHGTACEDCEPGRHGTSCESECTCIHGKCLDGIGGDGKCVCYKGWKGANCSV
EIVADPCNDTCDPNANCLTGLPGSLPTCSCSAGYAGNGSFCSEINPCDSGNGGCSEHANC
TKISPGERSCTCTEGYFGDGVVCIEKDGCLIDHGGCHRLAECIKTGPNLVGCNCLPGYSG
DGKMCLPINPCKTNNGGCSDFAWCRYTEPGSRNCSCRFSYVGDGLTCRGRLHRELDREPA
ASWFNKKAQTHMLKELNGDGPFTVFVPHQDYISNDTIEEWKNKSLTGHMVRYHVVGCQTL
LLSDIQSLSTLVTLSGRSLQISVDEDTVYLNKEVKIVSSDFVTSNGVIHFIDKVLVPSDL
QNKSDLHQPKKNFTETAESHGYTIFSKLLQDAGLLSMVQNSLHHPFTMLWPTDKVFNSLP
DERKKWLYSEDHRDKLAAYIKAHIIRDNKIVAADLPNQKSLRTLYGSLISFACSRNITGD
IFVDDGNAKIVDRQIEFDVGIAYGIDQLLEPPNMGARCDDFVTTTVSGRCGSCSFTPSCP
TGSTMVRVSLCSHPYLYTSGLFHSPFGYRRRYHHLMNPFHHQLSAGCMKECNSTQWVAKC
CKNHYGRDCQVCPGGLEAPCSNHGACNDGMAEQGKCNCSLGFTGTTCGQCAPNRYGPDCR
ECSCTVHGKCAEGIDGDGSCFCKEGWIGENCELQLGVKPVCTPECDANAVCQPNNICECD
SLYKGDGRNCTVVDLCMDSNGGCHEHATCTQNVVSRTCTCLPAYTGDGYSCTAINRCVSD
NGGCSEFATCIFTGPNERRCECNEGFVGNGVQCLEKAIPPLDRCLEENGGCHPQAICTDL
HFEEKTAGVFHVQSPKGKYKLTYSDALAACQAEGATMATIAQLSAAQQFGYHSCAAGWLD
SENVGYPTTNPSLNCGNNHVGVVLYNKPGSLYDAYCYRIKDVSCVCRDGYVGDGDFCNGN
LLDVVASNANFSVFYSTLLEYANYSSRGVELVDFLXNYITYETLFVPADAGFGENETLSL
RDLEYHISVNDSFIFYDEMSHGTVIPSRLGYNLSVTVSSFKRWKLTNGSKLVNDHLIVEW
DIPASNGILHVIERPLKAPPPPVLSAVAPASPHSSAAVVSTVLAVCLLAVAAGGALYFCF
KPKNEGFHFRYFKADEDEDDGMPSPAEGRSSLVSVPNPLFSGYNAFTEPFDETTDIDYSD
TQNILG
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcaatactctccagttcagcacaatgtgcacctcttgcgcggccgttcctagag
tatggtgtcctccaggttccagaaggaccacccagattactggagtcaaaggctgcagac
ctgggagaagaaaccctgaccctgtccggttgcagtcatacctgtgaaaaagatgtcacc
gaacacaagtgctgccctgggttctggggacctgactgcatgccttgtcccagcaagtct
ggcaagccctgcaattggaaaggtacctgcatggacggagtgactgggaatggaacttgc
atttgtgaggctgggtttagtggctttgcatgtcaggagtgtaaagatgaaaatgtatat
gggccagactgtcaattagagtgtgactgtgttcatggaatatgcagctctggcattgga
ggaaatggaagctgcatttgtgagacaggatacgctggagtaaggtgtgaccaagaatct
cagctgtgtcatggtatggactgtggggagaattctgtttgcaatgaaggtgctggaggg
actgctgtctgtggctgcatgcctggcttccagaaaactggacagcaatgcctgcctcaa
gatccttgtgcccagaacgtctgtgatcacaatgctgactgtgtaaaccatggacaaagg
aaatatgattgcagatgtaaagaagcctaccaaggagatgggaaagtgtgtgttccagta
aacccatgcttgattgacaatggaggctgtcctacaaactcaacaaactgtgtatacaaa
agcgtaggaaagacattgtgtgtgtgtaagagtgggatggaaggagccaatccctcagct
ggctgtacattaaaagatgtgtgcaagaaagacagctgcgacaaaagtgcaaaatgtgta
acgggactggatgggacggcgagctgtgtttgcaagaagggacagatttctgatggtacg
ttttgctatggaaacatcatagaaaggattttggagctgaacacagagtcaagacataaa
ggaaaacttaccagtgcgattaatatgttcgaaaagggatgtgaacttgccttgagcaaa
agactatttacagtatttgttccagcctcaacgttcacagtaactgggatgtcagaaaag
tacttatgcaaattgcacatgattattggcctgcacatgttcagtgatttacaagacaag
gtgttctggacactgggaggggagccagttcatttcatggcagacaagagctttagcttc
caaagagatcaaaataaaacgtaccgtatactgcagagtgacctcgccgcagccaatggg
atcattcacattatcaaccagccagtaaccaacatcagtccagagcatgcagaaaatgag
caggattcaaagaaaacaattgaagaaatcatagcaaaccaacataagttcagtagatat
caaacactgttagagaactgtgaaatgtctccaatattggaaggccctggtcctttcaca
gtatttgtaccaaccaacgaggcagtggatcagcacagagatggcactatcatatatcta
cttacagatggaaagaaaaaacttcaagagcttgtgaaacatcacatttatacatcagcc
tcggttactgtagacaggctggctgccatgccccagatcctcaccaaggcaaatcaaata
attactgttaacgttaccagtgatggcagaattgtattgggtggcaaagcagtggtttta
aatcagcaggatattgttgcatcaaatggaatcattcacgtcatagatgaaattttaatt
cctccttcaattgtcccaatcctgccccacagatgtgatgtgaccgagtataacatcgta
atgggtcagtgtgtggattgcagtaaattggacaccacgagctgtcctttaggaagcaca
gagctggacaagtttcacaagggctgtgaatatatctcctctgttatgaacataatcact
aacaggaggggttgtgccaaatactgcaacaagactgttgtgagacctgattgctgtaag
ggcttttttggccctgactgcaaagcttgcctgggcggatttcaaaatccgtgttaccaa
catggaacatgcaatgatgggattcaaggcaatggcacctgcagctgtcttccagatttt
caaggcattgcctgtcacatttgttccaacccaaacaaacatggtgaaatgtgtgatgaa
gattgcaagtgcttgcatggtgtttgtgataacaggcctggaagcaaaggggtgtgcagg
atcaattcctgtgcagaaggttacacaggagaattgtgcgacagagtaacaaagccttgt
ggcccgtctggcttgtctcagtattgccatataaatgctgtctgtgattacagtgacaat
acaaggtgtgtttgccggaatgggtatgaaggagatggcttttcatgtcaggaaatgaac
ccctgtcagaaggctgaccgaggtggctgttctgcaaatgcaaggtgcatctacacaagc
ccaggcaatgccacctgcatttgtaatgaaggctgggcaggggatgggcaagcctgtgtg
gagattgacaactgtttacttaataacagaggaggctgccattacaatgcagactgtata
actcagggtcctggacagagcgagtgtgtgtgtaagaagaactatatgggagatggttat
aactgtgacataataaacccctgtttgcaaagcaatggaggctgtcattccttggctaag
tgcaagcctcttggagatggtgaacgagagtgtctttgccctgagggttatggaggggat
ggagctatatgctacggaaacattttaacagaactggcaagcaattccaacttcttcagt
ttttatcagtggatcaagagttcctcattgtctaacccagaaggcaatgtaactgtcctg
gtgccatctgaaaatgccataaagggtttgaaagaagaggttcgagaattctggatgaag
ccttacatgctgccatttctagtccgagtgcactttctggaaggcgcatttaccattgat
gatctaaaacagcgaggagatgtggagctgtccacactgaacccacgcacaaagtgggaa
gtaaaggacaccagtgggactgtgatgatacagaacgccagcatcctcatttctgacatt
cctgcagtgaatggtttcattaacgtcattgaccaggttttaataccctcactggcagat
attcccccaccacccccaggtctaatgcaagtcctgaatcaaaccacctccttcagcttg
ttcaagaaggctttactgcattacaacctgacagagaaaatggactcatcagaaaagtac
accattcttattcctttcaataaagcaatagaggatcatctcaatgcaacaggatcagaa
gagctggatgaagactctgtaaggtatcacatcatagtggaagaaagactgctgcctggg
aatctgaggaatgggattcacaaaagtactatgttgggatcctcttatcaaataatgttt
cacaataacaatgaaaaccagacctatgccaatgaagtgccactgaacggggtattttat
agtactagaaatgggatgttgatgggcatttctcagcttttacacattcataagaaccga
tgtgacaaaaacgtaaccattctaacaaaggggttctgtggacgttgtgatggaaactac
aggtgtcctaagagagcaatcccacttactcatgtagcagatatggcagctctgaagtcg
aactgcaaatacagaaaaaagaataaaaaagtggatggttgttcctaccagtgtttgact
gtcaccgaggaccataattgctgtccaggctattttggactaaattgctttaagtgcccg
ggaaagccagggaactggtgttccaacaacggcatctgtcaggatggtgttctgggctca
ggggattgcctgtgcaaagaagggttccacggcaccgcctgtgaagattgtgagcctgga
cgacatgggaccagctgtgaatcagaatgtacatgcatccatgggaaatgtctcgatgga
ataggaggcgatgggaagtgtgtctgctacaaagggtggaaaggagcaaactgctccgta
gaaattgttgctgacccatgcaatgacacatgtgaccctaacgccaactgcttaacgggc
ctccctgggtcgctcccgacctgctcttgctctgctggatacgctgggaatggaagcttc
tgctcagagattaatccatgtgatagtggtaatgggggatgctcagagcatgcaaactgc
actaagatctcccctggggagaggagctgcacatgtactgaaggctactttggtgacggg
gtggtgtgtatagagaaagacggctgtctaatagaccacggagggtgtcatcgtctagct
gaatgcatcaaaacagggcctaatttagttggttgcaactgtctcccaggctacagtggg
gatggtaaaatgtgtttgccgatcaatccttgcaaaacgaacaatggaggctgcagtgat
tttgcctggtgtagatacaccgagccagggtcccgcaattgctcctgtaggtttagctat
gttggagatggtctgacatgcagaggaaggttacatcgggaactagaccgagaaccagcg
gcttcatggtttaataaaaaggcacagacgcacatgttgaaggagttaaatggagacggg
cctttcactgtctttgttccccatcaggattacattagtaatgacacgatagaggagtgg
aagaacaagagtctgactggtcacatggtacgctatcacgttgtcggctgccagacgctg
ctgctctctgatattcagtccctcagcacactggtcactctgtctggaagatccctgcag
atatcggtggacgaggacaccgtttacctaaacaaagaagtgaaaattgtcagcagtgac
tttgtgacctccaatggggttattcattttattgacaaggttttagtccccagtgatctg
cagaacaaaagtgacttacatcaacctaagaaaaattttactgaaacagcagagtctcac
ggatatactatattcagcaagctgctgcaggatgcaggcttgctgtcgatggtgcagaat
agtctccaccaccctttcacaatgctgtggcctactgacaaggtttttaattctctccct
gatgaaagaaagaaatggctgtacagtgaagatcacagagataaactggcagcgtatatc
aaagctcacatcataagggataacaagatcgtggcagctgatctgccaaatcagaaatcc
ctgagaacgctgtatggttcactgatctcgttcgcctgcagcagaaacataactggtgac
atttttgtggatgatgggaatgctaagatagttgaccggcagatagagttcgatgttggg
attgcttatgggatagaccagctcctggaaccgcccaacatgggggcccgctgcgatgat
tttgtaaccacaacggtttctggtaggtgtgggagctgcagtttcacaccgtcatgtcct
actggatcgactatggttagagttagtctgtgttcacatccttacctttatacttctggc
ttgtttcactcaccttttgggtaccgtagaagataccatcatttgatgaatcccttccac
catcagctttcagctggttgtatgaaggaatgcaattcaacacagtgggttgcaaagtgt
tgtaaaaatcattatggaagggattgccaagtctgccctggtggtctggaggctccctgc
agtaaccatggtgcttgtaatgatgggatggctgaacaaggcaaatgcaactgctcattg
gggttcaccgggacaacgtgtggacagtgcgctcccaaccgatatggaccagactgtagg
gaatgcagttgcactgtgcatgggaagtgtgctgaaggaattgatggagatggaagctgc
ttctgcaaggagggctggataggagagaactgtgaactccagcttggagtgaagcctgtt
tgtacacctgaatgcgatgccaatgctgtatgccagcctaacaacatatgcgagtgtgat
tcactgtataagggggatggtagaaactgtacagttgtggatttgtgcatggattccaat
ggaggatgtcatgagcacgcaacctgcactcagaacgttgtcagtcgcacctgtacgtgt
ttgcctgcctatacgggagatggctactcctgtacagcaataaaccgctgtgtatctgat
aatggaggatgtagtgaatttgccacgtgtatcttcactggtccaaatgaacgaaggtgt
gaatgcaatgaaggctttgtgggtaatggagtgcagtgtctggaaaaagcaattcctcca
ctagatcgctgcttagaggagaatggaggctgtcatccacaggctatttgcacagacctt
cactttgaagagaaaacggctggagtgttccatgtgcagtcaccgaaagggaaatacaag
ctaacctacagtgatgcgctggcagcctgccaggctgaaggagctaccatggcaaccatt
gctcagctgtccgcagcacagcagtttggttaccattcctgtgcagcaggttggctggat
tctgaaaatgtcggttatccaaccacaaacccctcactcaactgcggcaacaatcatgtt
ggagttgtgctgtataataagccagggagcctttatgatgcttactgctacagaattaaa
gatgtcagttgcgtctgtcgagatggatatgtaggggacggagatttctgtaatggaaac
ttgctggatgttgtagcttccaatgctaatttctcagtgttttactctacattactagag
tatgcaaactattcttcaaggggagtagaacttgtggattttctgntcaattatatcacg
tacgagacgctgtttgtgccagcagacgctggatttggagagaacgagactttatccttg
agagaccttgagtaccacatctctgtcaatgacagcttcatcttctacgatgaaatgtct
catggcacagttataccatccagactgggttacaacctctctgtgactgtatcctcattt
aagagatggaagttaaccaatggttccaaactagtaaacgaccatctgattgtagagtgg
gatatccctgcttccaatggaattctccacgtcattgaaagacctttgaaggccccgcct
cctccagtcctgtctgctgtggctcctgcctcccctcacagctctgctgcagtcgtctcc
actgtcctcgcggtgtgtttgctggctgtggctgctggcggggcgctctacttctgcttc
aaacccaagaatgagggctttcacttccgctatttcaaggcggacgaagatgaagacgat
ggcatgccctcgccagcagaagggagatcttcattggtttcagtaccgaatccactgttc
agtggttacaatgcatttacggaaccttttgatgaaaccacagacattgattattcagac
actcagaatattcttggttag
DBGET
integrated database retrieval system
