Acipenser ruthenus (sterlet): 117972808
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Entry
117972808 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117972808
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117972808
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GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
117972808
NCBI-ProteinID:
XP_034778970
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Position
8:complement(58840721..58844947)
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AA seq
852 aa
AA seq
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MYLSIFCFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLASGERNRKSNFRVLEN
SAPHLLDVDPESGLLYTKQRIDRETLCRRNPKCQLSLEVFANDKEICMIKVEIQDINDNS
PSFPSEQIDIDISENAAPGTRFPIASAHDADSGENGLKTYQITRDDYNIFSLDVKSRGDG
TKFPELVVQRPLDREEQSHHTLVLTALDGGEHPRSGTVQINVKVIDSNDNSPLFDQPSYI
VEIPENAPSGTVVIDLNATDPDEGTNGQVVYSFSGYAPDRIRELFSIDSKTGVIKVQGEI
DYEESGIIEIDVQAKDLGPNPIPAHCKVTVKVIDKNDNWPSIGFVSVRQGAISESAPTGT
VIALVRVTDKDSSGRNGQLQCRVLGNVPFKLEENYDNFYTVITDRPLDREVQDEYNVTIV
AKDNGIPPLNSTKSFTVKILDENDNAPRFTKPVYLLQVPENNIPGEYLGSVLAHDPDLGQ
NGTVSYSILPSHVGDVSIYTYVSVNPTNGAIYALRSFNYEQTKFFEFKVLAKDSGSPHLE
SNATVRVSVLDVNDNAPVIVLPLLQNDTAEIHVPRNVGVGYILTTVRAVDNDYGESGRLI
YEITDGNEEHLFEMDSVTGEVRTVHPFWEEVTPVAELIIKVTDHGKPKLSAVSKLIIKAF
TGSPPEGEPRINEEQRHWDMSLPLIVTLSIVSIILLAAMITIAVKCKRENKEIRTYNCRI
AEYSHPQLGKSKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRLPL
SSPRSEVMYLKPTSNNLTVPQGHAGCHTSFTGPVTNTTETPVNRMSIIQVGNPIYIHLSC
NPSVQHIASCSS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttctattttctgtttcttgctgctctgggctcaagccctgacactgaaaaac
ctgaattattccgtcccagaggaacaagggcccgggactgtgattgggaacattgccaaa
gatgccaggcttgcatctggagagcgaaacaggaaatccaactttcgggttttagaaaat
tcagccccacatctgctggatgtggatcctgaaagcggactgctgtatactaagcagcgg
atcgatagggaaacactgtgcaggcgaaaccccaagtgccagctctccttggaagtgttt
gccaacgataaagagatctgcatgattaaagtggaaattcaggatataaacgataattct
cccagtttcccttcagaacagatcgatattgacatttctgagaacgcagcaccggggaca
cgcttcccaattgccagcgcacacgatgccgactcgggggaaaacgggttaaaaacatac
cagatcacccgagacgattataatatattttcattggacgtaaaatccagaggagacggg
actaaattccctgaattagttgttcagagacctttagacagggaggaacagagccatcac
acacttgtattaacagcattggatggtggagaacatcccagatcagggactgtgcaaata
aatgttaaagttattgattctaatgacaatagtccattgtttgaccagccctcttatatt
gtagaaatacctgaaaatgccccttccggcactgtagtgatagatttaaatgctacagac
ccagatgaaggcaccaatggacaggtagtttattcttttagtggttatgcaccagatagg
atccgtgagcttttctctattgactctaaaacaggtgttataaaggttcagggtgaaata
gactatgaggaaagtgggattattgagattgatgtccaggctaaagatttaggacccaac
cccattcctgcccactgtaaagtaactgtcaaagtaattgataaaaatgacaattggccc
tccattggttttgtgtctgtccgccagggggccatcagtgagtctgcgcccacaggcact
gttattgccctggtaagggttactgataaggattcatcagggagaaacggacagctccag
tgcagagtgctgggcaatgtgcctttcaaactggaggaaaactatgataatttttacacc
gtaattaccgatagacctttagacagagaggttcaggatgagtacaatgtgacgatagtg
gccaaagacaatgggatccctcccctcaattcaaccaaatcttttacagttaaaatctta
gatgaaaatgacaatgccccacgttttaccaaaccagtttaccttctgcaggtgcctgag
aataacatccctggggagtatttggggtcagttttggcacatgatccagatttgggtcag
aatggcactgtatcttattctattttaccatcgcatgtaggagatgtgtccatctacaca
tatgtgtctgtgaaccccacaaacggagcaatttacgcgttacgatcctttaactatgag
caaacgaagttttttgagtttaaagtcctagcaaaggattcgggatctcctcatttggaa
agcaatgcaacagtacgggttagtgttttagatgtaaatgataatgccccagttattgtc
ttacctctcctacagaatgacactgctgaaattcatgtcccccgaaatgttggagtagga
tatattctaaccacagtaagggcagttgataatgactatggagaaagtggccggctaatt
tatgagattacagatgggaatgaagagcacttatttgagatggactccgtcactggtgaa
gtgagaacagtgcatcctttctgggaagaagttaccccagttgcagagctaataataaag
gtgacagaccatggaaaaccaaaactttctgcggtgtcaaaactgataatcaaggctttc
actggctctccgcctgaaggggagccccgaataaacgaggagcagcgtcactgggacatg
tctttgcctttgattgtcactttgagcatcgtctccatcatcctccttgcagccatgatc
accatagctgtaaagtgcaaaagagaaaacaaagagatcagaacttacaactgccggatt
gccgagtattctcatccacagctaggcaagagcaagaagaaaaagattaataagaacgac
atcatgctggtgcaaagcgaggttgaggagagggatgccatgaatgtgatgaatgtggtt
agcagcccctccctcgccacttcccccatgtattttgattaccagactagattgcccctg
agttcccccaggtcagaggttatgtacttgaaacccacctctaacaacctgactgttcct
caaggacatgctggctgtcacaccagcttcacaggaccggtgacaaatacaacggaaaca
ccagttaataggatgtcaataattcaggtaggaaacccaatttatatccatctgtcttgt
aacccctcagttcagcacattgcgtcttgttccagttga
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