Acipenser ruthenus (sterlet): 117972824
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Entry
117972824 CDS
T07327
Name
(RefSeq) netrin receptor DCC-like isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117972824
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117972824
Cell adhesion molecules [BR:
arut04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117972824
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Ig_Rha78A_N
Interfer-bind
Protocadherin
EphA2_TM
CRLF2-like_D2
Arylsulfotran_N
TM_ErbB1
FAM176
GH101_dom-5
PRIMA1
Motif
Other DBs
NCBI-GeneID:
117972824
NCBI-ProteinID:
XP_034779053
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Position
1:complement(88341869..88394442)
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AA seq
804 aa
AA seq
DB search
MPPPSNMQNGFITGYKIRHRKTGRRGEQETLEPNNLWYLFTGLEKGSQYSFQVAAMTVIG
TGPSTEWYTAETPENDLDESQVPDQPSSLHVRPLTTSIVMSWTPPLNPSIVVRGYIIGYG
VGSPYAETVRVDSKQRYFSIENLEPSSHYVISLKSFNNAGEGVPLYESAVTRSMTDPVDP
TDDLYHLFDKFPTPVPDTSTPMIPPVGVQAVALTPDSVRVSWADNSMSKNQKMTEVRFYT
VKWKTSYSTSGKYKSADTTALSHTVTGLKPNTMYEFSVMVTKGRKSSTWSMTAHATTYEA
APSSAPKDLTVINREGKPRAVIISWQPPLEANGKITGYILFYTLDKNLPIDDWVMESISG
DRLTHQVMDLTLDTVYYFRIQAKNAKGVGPLSDPILFRTPKVEHPDKMANDQGRHGDGGY
WPSDTNLIDRSSLNEPPIGQIHPPHGSVTPQKNSNLLVIIVVSVGAVTVVVVVIVAVICT
RRSSAQQRKKRATHSTGKRKGSQKDLRPPDLWIHHEEMELKNIEKPSGSDPSSRDSPLQG
CQDITPVSHSQSESQMGSKSSHSGLDADEVASSISTLERSLAARRATRTKLMIPMDSQPS
NTPIVSAIPVPTLESAQYPGILPSPTCGYPHPQFTLRPVPFPTLTVDRSYASGRTIAEGT
ASHSQHQSLLAQTQSEHAVTEEVPSRTIPTACVRPTHPLRSFANPLLPPPMSAIDPKVPY
TPLLSQTGANLPKALVKTASLGLAGKARSPLLPVSVPTAPEATEEGHKQPEDPASVYEQD
DLSEQMASLEGLMKQLNAITGSAF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaccctcaaacatgcaaaatggctttatcactggatacaaaatccgacaccga
aaaactgggcgcagaggagaacaagaaacgcttgagccaaataacctttggtatctgttt
acagggctggagaaaggaagtcagtacagtttccaggtggctgccatgactgtgattggg
acgggcccttccacagaatggtacacagcggaaactccagagaatgatctagatgaatcc
caggtgccagatcagccaagttctctccacgttagacccctgaccaccagcattgtcatg
agctggacacccccgctgaaccccagcattgtggtcaggggttacatcattgggtatggg
gtgggcagtccctatgccgagactgtcagagtggacagcaagcagcgctacttctccatt
gaaaatctagagccaagctcccattatgttatttccctgaagtccttcaacaatgcagga
gaaggggttcctctctatgagagtgcagttaccagatctatgacagaccctgttgaccca
acagatgatttgtatcatttgtttgataaattccctaccccagtcccagatacctccacc
cccatgatcccacctgtaggtgtgcaggctgtggcactcacccctgactctgtacgggtc
agctgggctgacaattcaatgtccaagaaccagaagatgaccgaggtgcgcttctacact
gtcaaatggaagaccagctactccaccagcggcaaatacaagtctgcagacaccacagcc
ctcagtcacaccgtcacaggactcaaacccaacaccatgtacgagttttctgtcatggta
acgaaaggtcgaaagtcaagcacatggagtatgactgcacatgcgacaacctatgaagct
gctcccagttctgccccaaaggatctcactgtaatcaacagggaggggaaacctcgggcc
gtcatcatcagctggcagccaccattggaggccaatggaaaaatcacaggatacatcctt
ttctacacattggacaaaaacctgcccattgatgactgggttatggagtctatcagtggt
gaccggctcacgcaccaggtcatggacctcaccctggacacggtttactatttccgcatc
caagccaagaatgcaaagggggttggcccgctctctgaccctatcctcttcaggactccg
aaagttgagcaccctgacaaaatggctaatgaccaaggtcgtcatggagacggagggtac
tggccatctgacaccaatctgatagataggagcagccttaacgagcctcccattggtcag
atccaccctcctcatggcagcgtgacccctcagaagaacagcaacctgctggttatcatc
gtggtctcagtgggcgctgtcactgtggtggttgtggttatcgtggctgtcatttgtaca
cgccgctcgtcagcacagcaaaggaagaaacgtgccacccacagcacaggcaagagaaaa
ggcagccagaaagatctgaggcccccggatctgtggatccaccacgaggagatggagctg
aagaacattgagaagccctcgggttccgatccctcaagccgtgattcgcccttgcagggc
tgtcaggacatcacgcctgtcagtcacagccaatcggagagccagatgggcagcaagagc
agtcactcaggtctggatgcggacgaggtggccagcagtatctccacactggagcgctcc
cttgctgcccgcagagctacacgcaccaagctaatgatccccatggactcccagcctagc
aacacacccattgtaagtgccatacccgtgccaacattagaaagtgcccagtacccagga
atcctgccttcgcccacctgtgggtacccgcacccacagttcacgcttcgcccagtgcca
ttccccacgctcaccgttgatcgaagctacgcgtcaggtagaacgatagcagagggcacc
gcatcacactcccagcatcagtctctgctcgcccagacgcagtcagaacatgcagtcact
gaggaggtacccagcagaactatccccacagcctgcgttcgtcccactcaccctcttcgc
agcttcgccaaccccttgctacctccccccatgagcgccattgaccccaaagtcccctac
acaccacttctgtctcagacaggtgcaaacctaccaaaggctctggtgaagactgcctcc
ctgggtttagctggaaaggcgagatctccactgcttccggtttccgtgccaacagcccca
gaggccacagaggagggccataaacagccagaagaccctgccagtgtatatgaacaagat
gacctgagtgaacaaatggctagtctagaaggactaatgaagcaacttaatgccatcacc
ggctcagccttttaa
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