Acipenser ruthenus (sterlet): 117972856
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Entry
117972856 CDS
T07327
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117972856
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117972856
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
90S particles
Helicases
117972856
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
117972856
NCBI-ProteinID:
XP_034779116
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All DBs
Position
9:49296362..49391388
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AA seq
890 aa
AA seq
DB search
MTGVSGGKTPCVPKSKKRGRNPRDTDDPVKNFERWKKKYNKKKVRVKQEKRRNKKPDWQI
ERETISKLVKQYQEINPSEAVKFSDFPLSKKTLKGLWEAQYRLPTEIQKQTIGLALQGKD
VLGAAKTGSGKTLAFLIPVLECLFRQQWTADDGLGALIISPTRELAYQTFEVLRKVGKNH
EFSAGLIIGGKDLKSETERIHRTNIIICTPGRLLQHMDQTMSFHASNLHILVLDEADRIL
DMGFADTVNAIVENLPKTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATL
EQNYVVCELHQKINMLFSFMKSHLNRKVIVFFSSCKEVQFLFRVFCRLRPGIPVLALHGK
QQQMKRMEVYNDFIRKKAAVLFATDIAARGLDFPVVNWVLQFDCPEDANTYIHRVGRTAR
YKEGGEALLVLLPSEEKGMLQQLQERKVPINKIKVNPDKLTNVQQKLEAFLAQEQALKER
AQRCFVSYLRSVYLMKNKDVFDVFKMQLSEYACSLGLAVAPRVRFIQKAKKQREESARDK
TDTTREAASGEEQESSTEDELENFKARLRGQKPTSVGATSQGQGEMSCLAGDPSSGGESE
EESGSSGEEEEDETGGGTSGIKFVEDDDDDDDDLKDLDLLTVKRRDVFGLDAASEEQSDE
KLPQKKKVEKDSKFKAAKKALKRNFIVNTKVKFTEDGEMVQQWPPVQRLAVKDEDGEDAN
AGIDVQKARERLFEEDKFDKEEYRRRIKEKHRERRLKEKAARREASKRQKEGGSDEGEEE
EEEEVVAYLDQSDNEGEFDPSTLPDPDKHRDSNQDEETSAEEDVIVPSEKRVRKRSYSSE
SSSSPDEEEMPAGGKKRKSHGDASLLKPLDTGLSLAEDEELVLHLLGSRS
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgactggagtaagtgggggaaagacaccttgtgtcccgaaatccaagaaacggggacgt
aaccccagagacactgacgaccccgtcaaaaattttgagagatggaagaaaaaatacaac
aagaagaaagttagggtcaaacaagagaaaagacggaataagaaaccagactggcagatc
gagagggagacgatcagcaaactggtgaaacagtaccaggagatcaacccaagtgaggca
gtgaaattttcagattttcccttgtcaaaaaaaactttgaaaggattgtgggaggcacag
tatcgtctgcccactgaaattcagaagcagacgatcggtttggcgttgcaagggaaagat
gtcttgggagcagcgaagacaggatctggcaaaactctggcctttctgatccctgttttg
gagtgcttgtttcgtcagcagtggacagcggatgatggattaggcgcactgatcatttca
cccaccagagaactggcttatcaaacctttgaggtgctgcggaaagtggggaagaaccac
gagttttcagctgggctaatcataggcggaaaggatttgaaatccgagacagaaaggatt
catcgcaccaacattatcatttgcactccaggacgcctcttgcagcacatggatcaaaca
atgtctttccatgcttcaaacctgcatattttggttctggatgaagccgatcgaattctg
gacatggggtttgcagacactgtaaatgccattgtggagaacctccccaagacccgtcag
accctgctcttctcagctacgcagaccaagtctgtgaaggacctggccagacttagtctc
aaagatcccgagtatgtctgggtgcacgagaaagccaagttcagcacccctgcaacgctg
gagcagaactatgttgtctgtgaactgcaccagaaaatcaacatgctgttctccttcatg
aagagtcatctgaataggaaggtcattgtgtttttttcaagctgcaaagaggtgcagttc
ttgttccgagtgttctgccgcctacgccctgggatcccagtgctcgctctgcatggcaaa
cagcagcagatgaagaggatggaggtttacaacgacttcatccgcaagaaggcagccgtg
ctgtttgctactgacatagcagccaggggccttgatttccctgtggtgaactgggtactg
cagtttgattgtccagaagacgctaatacctacatccacagagtggggagaacagccagg
tataaagaaggtggtgaagcactgttggttctgttgccatcagaagaaaagggaatgttg
caacagcttcaagaaaggaaggtccccattaacaaaatcaaggtcaatccggacaagtta
acaaatgtgcagcagaaactggaggctttcctagcacaggagcaggctctaaaggagcgt
gcacaaagatgctttgtatcctacctgcgatctgtctacctgatgaaaaacaaagatgtg
tttgatgtatttaagatgcagttatcagagtatgcttgctcgttaggcctggccgtggca
ccaagagttcgcttcattcagaaagcaaagaagcagagggaggagagtgcgagagacaag
acagacaccaccagggaggcagccagtggagaggaacaggagtccagcacagaggatgag
ctggagaacttcaaagctcgtctcaggggccagaaacccacttcagtgggggcaacgtcg
caaggccagggagaaatgtcatgtcttgcaggggacccatcctctggaggagagtcggag
gaggagtctggttcttcaggggaggaggaggaagatgagactggaggggggacatcgggg
atcaagtttgttgaagatgatgacgatgatgatgatgacctgaaagacctggatttactg
actgtgaagagaagggatgtttttggtcttgatgccgcttctgaagagcagtcagatgaa
aaactaccccaaaagaagaaggttgaaaaagactccaagttcaaagcagccaagaaagcc
ctgaagaggaattttatagtgaacacaaaagttaaatttactgaggatggagagatggtt
cagcagtggcctcctgtacagaggttggcagttaaagatgaggatggagaagacgccaat
gctggcattgatgtgcaaaaggcccgcgagagactgtttgaggaggacaaatttgacaaa
gaggaatacaggagaagaatcaaagaaaagcacagggagagaaggcttaaagagaaggca
gccagacgagaagccagcaaacggcagaaagagggtggaagtgatgaaggtgaggaggag
gaggaggaggaagtggtggcctaccttgaccagagtgataatgaaggggagtttgacccc
agcaccctgcctgatcctgataaacacagggactctaatcaagatgaggagacgagcgct
gaagaagatgtgatcgtgccctctgagaagagggtgagaaagagaagctacagcagtgag
agcagcagcagccctgacgaggaggagatgcctgcagggggaaagaagaggaagagtcac
ggcgatgccagcctgctcaagcccctggatactggcttgtccttggcagaagacgaagag
cttgtgctacatttgctcggcagcaggagctaa
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