Acipenser ruthenus (sterlet): 117973312
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Entry
117973312 CDS
T07327
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117973312
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117973312
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
Helicases
117973312
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Cas3-like_C_2
SBF_like
Motif
Other DBs
NCBI-GeneID:
117973312
NCBI-ProteinID:
XP_034781098
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All DBs
Position
12:5470096..5476383
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AA seq
601 aa
AA seq
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MENVTEGTWRSLPVKLNEKIFQTLDELGFTHMTPVQSACIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGALVVTPTRELAIQINEVMEHFTKHFPQFRRILLIGG
SNPIEDVEKFKELGGNIIIATPGRLEDMFRRKADGLDLASSVKTLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQEVENLVRAGLRNPVRITVKEKGATESSTQKTPA
RLQNYYTVCRTEEKFNLLVAFLRQHKHEKHLVFFSTCACVEYYGKALEALVKNGTILCIH
GKMKHKRNKIFTEFRKLKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTA
RIGNQGSALVFLLPMEESYVNFLAINQKCPMQEMAPIKDMVDVLPKVKSLAMADRAMYER
GMRAFVSCVQAYNKHECSLIFRVKDLDFASMARGFALLRLPKMPELKGKSFPGFVPELID
TDSIPYKDKNREKQRQKMLAEMRQQRPQDRVRKNFTKNKAWSKQKTRKDKKKKKADKRKR
EEGSDIDDEDMGELLKDTRLLKKLKKGKITEEDFDKQVITGPKSENRKGGDHEQDDSEDD
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtgacggaaggcacgtggagaagtttacctgttaaacttaacgaaaagatt
tttcagactctcgacgagctgggattcacacacatgacaccagtccagtctgcgtgcatc
cctctgtttatgaagaataaagacgtggcggctgaagcggtgacaggcagtgggaagacc
ttggcgtttgttattcccatattggaaatactgctaaggagagaggagaagttgaagaaa
atgcaggttggtgctctggtcgttacaccaacacgagagcttgccattcagatcaatgaa
gtgatggaacattttactaagcatttcccacagttcagacggattcttctaatcggtggg
agcaatccaattgaagatgtggaaaaattcaaagaacttggaggaaacatcatcattgcc
actccagggcgtctggaggacatgttcaggaggaaggcggatgggctggacctggctagc
agtgtgaagaccctcgacgtcctggttctagatgaggcggacaggcttcttgacatggga
tttgaagcaagcttgaataccattctcgggtatttacccaagcagaggaggacaggcctg
ttctcagcaacgcagacccaggaggtggagaacctggtgagagccggactgcgtaaccca
gtacgcatcacagtgaaagagaaaggagccacggagagcagcacacagaaaacaccagcc
agactgcagaactactacacggtctgcagaacagaggagaagtttaacctgctcgtggca
tttcttcgacagcacaaacacgagaaacacctggttttcttcagtacgtgtgcctgtgtg
gagtattacgggaaagccttggaagccttagttaaaaatggaaccatactttgcattcac
gggaaaatgaaacataagcgcaacaaaatctttacagagtttcgtaagttaaaaagtggc
attctggtttgcactgatgtaatggcgagaggtatcgacattcctgaggttaactgggtc
ttgcagtatgaccctccaagcagtgccagttcttttgtccatcgctgtggacggaccgct
cgcattggcaatcagggcagtgctcttgtatttttgcttcctatggaagaatcttatgtc
aacttcctggccattaaccagaagtgtccaatgcaggagatggcccccataaaggacatg
gtagatgttcttcctaaagtgaagtctctagccatggcagacagagctatgtatgagagg
ggaatgagagcctttgtgtcgtgtgtacaagcatataacaaacacgaatgcagcctcatc
ttcagagtaaaggatctggactttgcaagtatggctcgtggctttgctttgttaagattg
ccaaagatgcctgagctaaaaggaaagagtttcccaggctttgtacccgaactgatagac
acagactccatcccctacaaagataagaacagggagaagcaacgacagaagatgctggca
gaaatgcgacagcagagaccgcaggaccgagtcaggaagaattttaccaagaataaggcg
tggtccaaacagaaaacaaggaaagacaagaagaaaaagaaagcagacaaaagaaagaga
gaggagggctcggacattgacgacgaggatatgggtgaactgctcaaagacacccgattg
ttgaagaagctgaaaaagggcaaaatcacggaggaggattttgacaagcaagtgataaca
ggaccgaagtcagaaaacagaaagggaggcgaccacgagcaggatgattcagaggatgac
gagtag
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