KEGG   Acipenser ruthenus (sterlet): 117973346
Entry
117973346         CDS       T07327                                 
Name
(RefSeq) splicing factor 3A subunit 1-like
  KO
K12825  splicing factor 3A subunit 1
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117973346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117973346
Spliceosome [BR:arut03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117973346
 Complex B
    117973346
 Complex C
   U2 SnRNP specific factors
    117973346
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 117973346
NCBI-ProteinID: XP_034781302
LinkDB
Position
12:complement(8527754..8537762)
AA seq 808 aa
MPPGPVQIVLPDSNNKVEETKDEPAVSKTIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKALEPSAAAVPKVMQQQALQNASQQ
QLPQKVQAQVIHETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLM
QKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLQKMKREAENPREVLDQVRYR
VEWAKFQERERKKEEEEREKERVSYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGA
RILIQERYEKFGESEEVEMEVESEDEDDEPEERREPPPTHLDQDTQLQDMDEGSDDEEDS
MKAPPPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPPAPVSDEYLISPITGEKIPASKM
QEHMRIGLLDPRWLEQRDRSIRERQIEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIG
KKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKI
GPSKPTDKPQPPMSSSAPSMPSSAPPVSVPRPPLIPPPVRTTLVSTLPVMQRPSMVRLGP
GQVLASMPPMIHAPRINVVPMSPSGHLMAPRPPPMVVPAAFVPAPPVPQPPSSAPAPMPP
ARPPPPHDDEPASKKMKSEDNLIPEEEFLRRNKAPVTVKVQVPNMQDKTEWKLNGQLLTF
TLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMVNSSMIHLALKERV
TLGGRKKVSPAPGATALGVHPHRAAAGS
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgccgccagggcctgtgcagatcgtcctgccggacagcaacaacaaggttgaggaaaca
aaggatgagcctgcagtgtcgaaaaccattgttgggatcatttatcccccgccagaggtc
cggaatattgtggataagacagccagctttgtggccaggaacggaccagaatttgaagcc
aggatccgtcagaatgaaattaacaatcccaaattcaatttcctgaaccccaatgacccg
taccatgcctactaccggcacaaggtgaatgagttcaaggaggggaaggcgctggagccc
tcggcggcggccgtgcccaaggtcatgcaacaacaggcactgcaaaacgcatcccaacag
cagctgccacagaaggttcaggcccaggtgatccacgagactgtggtgcccaaggagcct
ccccctgagtttgagttcatcgcggaccccccctctatctccgctttcgacctggatgtg
gtgaagctcactgcccagtttgtggctcgcaacggcaggcagttcctcacccagctaatg
cagaaagagcagcgcaattaccagtttgacttcctgcggccccagcacagcctttttaac
tacttcaccaagctcgtggagcagtacaccaaggtccttatcccacccaaaggattgctg
cagaaaatgaagagggaggcagagaatccacgagaggtgcttgatcaggtgaggtatcga
gtggagtgggcaaagtttcaggagcgcgagagaaagaaagaggaggaggagagggagaag
gagcgggtatcctacgcacagattgactggcatgactttgttgttgtggaaactgtggac
ttccagcccaatgagcaaggtcacttccctcctcccaccaccccagaggagctgggcgcc
cgaatcctgatccaggagcgctatgagaagtttggggagagtgaggaggtggagatggag
gtggagtctgaagatgaggacgatgaacctgaggagaggcgcgagcctccaccgacacac
ctggaccaggacactcagctccaagacatggacgagggttctgatgatgaagaggacagt
atgaaggccccgccgcccccagataaccccatgcccccaccactgccccccacccctgac
caggtcatcatccgcaaggactacgaccccaaagcctccaagccccagcccccagctccg
gtctcagacgagtacctcatctcccccatcactggagagaagatcccagccagcaagatg
caggagcacatgcgcattgggctgctggacccgcgctggctggagcaacgagaccgcagc
atccgggagaggcagatcgaggacgaggtgtacgcccctggcctggacatcgagagcagc
ctgaagcagcttgccgagcgccgtaccgatatcttcggtgtggaggagacggctatcggc
aagaagatcggggaggaggagatccagaaaccagaggagaaggtcacgtgggacggtcac
tctggcagcatggcgcgcacccagcaggcggcccaggccaacatcacactgcaggagcag
atcgaggccatccacaaggccaaggggctggtccccgaggacgacagcaaagagaagatc
ggacccagcaagcccaccgacaagcctcagccgcccatgtcctcctctgcacccagcatg
cccagctctgcaccccctgtctcagtgccccgcccgccactgattcctcccccggttcga
accacgctggtctcgactttgccagtgatgcagcgtccctcaatggtgcgtttgggccca
ggtcaggtgctggcttccatgccacctatgatccacgcgcctcgtatcaatgtggtgccc
atgtctccctcgggacacctcatggcacctcgtccaccccctatggtggttccagcagca
ttcgtgccagcgcctcctgtgcctcagccccccagctcggccccagcgcccatgcccccc
gcacgcccccctcctccacacgacgatgagcctgccagcaagaagatgaagtcagaggac
aacctcatcccagaggaggagttcctacgcagaaacaaggcaccagtaacggtgaaggtg
caagttcccaacatgcaggacaaaacagaatggaagctaaacgggcagctcctcactttc
acactcccgctgacagaccaggtatccgttataaaggttaaaatccacgaagccaccggc
atgccagctggtaaacagaagttgcagtatgagggtatcttcatcaaagactccaactcg
ctggcttactacaacatggtcaacagctcaatgatacacctggccctgaaggaaagagtg
accctgggcggcaggaaaaaagtgagccctgccccaggggcaactgctctgggggtccat
ccacacagagccgcagcaggaagctag

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