KEGG   Acipenser ruthenus (sterlet): 117973366
Entry
117973366         CDS       T07327                                 
Name
(RefSeq) splicing factor 3A subunit 1-like
  KO
K12825  splicing factor 3A subunit 1
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117973366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117973366
Spliceosome [BR:arut03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117973366
 Complex B
    117973366
 Complex C
   U2 SnRNP specific factors
    117973366
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 117973366
NCBI-ProteinID: XP_034781372
LinkDB
Position
12:complement(8407755..8418004)
AA seq 782 aa
MPPGPVQIVLPDSNNKVEETKDEPAVSKTIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKALEPSAAVPKVMQQQALQNASQQQ
LPQKVQAQVIHETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQ
KEQRNYQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLQKMKREAENPREVLDQVRYRV
EWAKFQERERKKEEEEREKERVSYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGAR
ILIQERYEKFGESEEVEMEVESEDEDDEPEERREPPPTHLDQDTQLQDMDEGSDDEEDSM
KAPPPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPPAPVSDEYLISPITGEKIPASKMQ
EHMRIGLLDPRWLEQRDRSIRERQIEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGK
KIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIG
PSKPTDKPQPPMSSSAPSMPSSAPPVSVPRPPLIPPPVRTTLVSTLPVMQRPSMVRLGPG
QVLASMPPMIHAPRINVVPMSPSGHLMAPRPPPMVVPAAFVPAPPVPQPPSSAPAPLPPR
ARPPPPHDDEPASKKMKSEDNLIQRRRRRNKAPVTVKVQVPNMQDKTEWKLNGQLLTFTL
PLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMVNSSMIHLALKERGGR
KK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgccgccagggcctgtgcagatcgtcctgccggacagcaacaacaaggttgaggaaaca
aaggatgagcctgcagtgtcgaaaaccattgttgggatcatttatcccccgccagaggtc
cggaatattgtggataagacagccagctttgtggccaggaacggaccagaatttgaagcc
aggatccgtcagaatgaaattaacaatcccaaattcaatttcctgaaccccaatgacccg
taccatgcctactaccggcacaaggtgaatgagttcaaggaggggaaggcgctggagccc
tcggcggccgtgcccaaggtcatgcaacaacaggcactgcaaaacgcatcccaacagcag
ctgccacagaaggttcaggcccaggtgatccacgagactgtggtgcccaaggagcctccc
cctgagtttgagttcatcgcggaccccccctctatctccgctttcgacctggatgtggtg
aagctcactgcccagtttgtggctcgcaacggcaggcagttcctcacccagctaatgcag
aaagagcagcgcaattaccagtttgacttcctgcggccccagcacagcctttttaactac
ttcaccaagctcgtggagcagtacaccaaggtccttatcccacccaaaggattgctgcag
aaaatgaagagggaggcagagaatccacgagaggtgcttgatcaggtgcggtatcgagtg
gagtgggcaaagtttcaggagcgcgagagaaagaaagaggaggaggagagggagaaggag
cgggtatcctacgcacagattgactggcatgactttgttgttgtggaaactgtggacttc
cagcccaatgagcaaggtcacttccctcctcccaccaccccagaggagctgggcgcccga
atcctgatccaggagcgctatgagaagtttggggagagtgaggaggtggagatggaggtg
gagtctgaagatgaggacgatgaacctgaggagaggcgcgagcctccaccgacacacctg
gaccaggacactcagctccaagacatggacgagggttctgatgatgaagaggacagtatg
aaggccccgccgcccccagataaccccatgcccccaccactgccccccacccctgaccag
gtcatcatccgcaaggactacgaccccaaagcctccaagcctcagcccccagctccggtc
tcagacgagtacctcatctcccccatcactggagagaagatcccagccagcaagatgcag
gagcacatgcgcattgggctgctggacccgcgctggctggagcaacgagaccgcagcatc
cgggagaggcagatcgaggacgaggtgtacgcccctggcctggacatcgagagcagcctg
aagcagcttgccgagcgccgtaccgatatcttcggtgtggaggagacggctatcggcaag
aagatcggggaggaggagatccagaaaccggaggagaaggtcacgtgggacggtcactct
ggcagcatggcgcgcacccagcaggcggcccaggccaacatcacactgcaggagcagatc
gaggccatccacaaggccaaggggctggtccccgaggacgacagcaaagagaagatcgga
cccagcaagcccaccgacaagcctcagccgcccatgtcctcctctgcacccagcatgccc
agctctgcaccccctgtctcagtgccccgcccgccactgattcctcccccggttcgaact
acgctggtctcgactttgccagtgatgcagcgtccctcaatggtgcgtttgggcccaggt
caggtgctggcttccatgccacctatgatccacgcgcctcgtatcaatgtggtgcccatg
tctccctcgggacacctcatggcacctcgtccaccccctatggtggttccagcagcattc
gtgccagcgcctcctgtgcctcagccccccagctcggccccagcgcccctgcccccgcgc
gcacgcccccctcctccacacgacgacgagcctgccagcaagaagatgaagtcagaggac
aacctcatccagaggaggaggaggagaaacaaggcaccagtaacggtgaaggtgcaagtt
cccaacatgcaggacaaaacagaatggaagctaaacgggcagctcctcactttcacactc
ccgctgacagaccaggtatccgttataaaggttaaaatccacgaagccaccggcatgcca
gctggtaaacagaagttgcagtatgagggtatcttcatcaaagactccaactcgctggct
tactacaacatggtcaacagctcaatgatacacctggccctgaaggaaagaggcggcagg
aaaaagtga

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