Acipenser ruthenus (sterlet): 117973798
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Entry
117973798 CDS
T07327
Name
(RefSeq) protocadherin alpha-C2-like
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117973798
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117973798
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117973798
NCBI-ProteinID:
XP_034782951
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Position
15:24788624..24791071
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AA seq
793 aa
AA seq
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MHADRLDFHRTPKWKCVCFIFLSCFWEATTGQIRYKIQEELEVGTFVGNIVEDLGLDVNA
LSARKFRMSTGAKKKYTEVNLKNGIVFINDRIDREEICGQTLICFLNLEIVLENPLEMHY
AEIEILDVNDNSPIFPEPKLSLEIAEHVLPGARFSLESAHDPDTGKNSLASYKLSPSEYF
QLHVETRNEPKKVPFLVLRKQLDRELQSVHNLVLTAVDGGSPERSGTVDILITVLDSNDN
PPVFAKQIYAVGILENASIGTPVIKLNASDADEGSNGKIRYFFSDKTMENVREAFSIDSN
SGEIHVKGLLDFEEKSDYDIEFVAEDEGQPSMVAQCSVIVKIIDVNDNAPLVTVSSLSNP
LKEDTPIDTVVALISVTDADSGDNAKVKCSLSPNVPFKLKPSFKTNFYSLVIDGFLDRET
TPEYNVTITATDFGSPPLYGIKTVRITISDVNDNPPRFEQSSYSVYIQENNAPGASIFQI
TALDPDSMENGKVSYSVFEKQIEDRPVSAILSINPDNGSICALNSFDCEKLKSFHFEVQA
KDNGLNPLTSNVTVHVYILDQNDNAPVILSPLANSGSLVAVEKVPRSVNTGFLVTKIRAN
DADIGYNAWVSFKLSDITDPSLFAVGLYTGEIRTRRLFADTDVDLHKLTITVKDGGSPSL
SATVNMDIEVVENTEENVPLFSTSFKDQFKSPDDASQLTLYLIITLGSISFLFLVSVIAL
VTTYCYKARCHKSNQTFAPYLNYGDGSAGGSLFRTYRYQMHLSQECSKHDSMTGMQQIHR
DTLRSNGNMHTQS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcagaccgtctggattttcacaggactccaaaatggaaatgcgtttgctttatt
tttctatcctgcttttgggaagcaacaacggggcagattaggtacaaaattcaagaggaa
ttggaagtggggacctttgttggaaacattgttgaggatttgggattggatgttaatgcc
ctgtctgctcgcaagtttcgaatgtcgaccggagctaagaaaaaatatacagaggtaaat
ctaaagaatgggattgtattcattaatgatagaatagacagagaggagatttgtggacag
acgttaatatgttttcttaacctggaaatagttttagaaaaccctcttgagatgcattat
gctgagatagaaatattagatgtcaatgataattcgcctattttcccagagcctaaactg
tctcttgaaattgcagaacatgtattgccaggagcgaggttttctctggaaagtgcacat
gatccagacactggaaaaaactcccttgcttcgtacaagctcagtccaagtgaatatttt
caactgcatgttgaaacacgaaatgaacctaagaaagtaccatttctagttttaagaaag
caactggacagggagcttcagtcagttcacaatttagttttgactgcagttgatggtggc
tcaccagaaaggtcagggacggtggatatattgataacagttctggactctaatgacaat
ccacccgtctttgccaaacaaatatatgctgttggtatattggaaaacgcaagcataggc
acaccggtaattaaacttaacgccagtgatgcagatgagggtagcaatgggaaaattaga
tatttttttagtgacaagacaatggagaatgttcgtgaagcatttagtatagattctaat
tctggggagatacatgttaaagggttgctagattttgaagaaaaaagtgattatgatata
gaatttgtggctgaggacgaggggcaaccctcaatggtagctcaatgtagtgtaattgtt
aaaataatagacgttaacgataacgcaccgttggttacagtcagctccctttctaatccg
ttaaaggaagatactcctatagacacagtagtagctctaattagtgtgactgatgctgac
tcaggagacaacgctaaagttaagtgttcattgtctccaaacgtgccatttaaattgaag
ccgtcatttaaaacaaacttttattctttggtcattgatggttttctagacagagaaaca
acaccagagtataatgttacaatcactgctacagattttggttctccacctctttatggc
attaaaacagttagaattacgatttctgatgtaaatgacaatccgccccgttttgagcag
tcatcttatagcgtatatattcaagaaaataatgcaccaggcgcttctattttccaaatt
actgcgctggatccagatagcatggagaacggaaaggtttcttactcggtttttgaaaaa
cagattgaggatcgaccggtgtctgctattttgtccattaaccctgacaatggaagcatt
tgcgcgctgaatagttttgactgcgagaagttaaagagctttcattttgaagttcaagct
aaagataacggactcaatccgcttacttcgaatgttacagtccacgtgtatattcttgac
cagaatgacaatgcgccggtcatactgtctcctttagcgaatagcgggtctctggtggct
gtagagaaagttccaagatctgtgaacacaggttttctggtcaccaagatcagagcaaat
gatgctgacattggttacaatgcatgggtctcattcaaactaagtgacattacagaccca
agcctgtttgctgtggggctttacacaggggaaattagaacacgaagactttttgcagac
acggatgttgaccttcataaactcacaattacagttaaggacggcggcagtccttcactc
tcagcaaccgtaaacatggacatcgaagttgtggaaaacacagaagaaaacgttcctttg
ttttcaacttctttcaaagaccagttcaaaagtccagatgacgcttcccaactaactctg
tatttaatcataacgctggggtcgatttccttcctatttttagttagtgttatcgccctt
gtaactacttactgttacaaagccagatgccacaagtctaaccagacgtttgctccatat
ctcaactatggcgatggcagcgcaggcggatcactctttcgcacttaccgctaccaaatg
catttgtctcaggaatgctccaaacacgactcgatgactggcatgcaacagattcatagg
gatactttgagaagcaacggaaacatgcacacacaatcgtga
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