Acipenser ruthenus (sterlet): 117973865
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Entry
117973865 CDS
T07327
Name
(RefSeq) whirlin-like isoform X1
KO
K21879
whirlin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
arut03037
]
117973865
Cilium and associated proteins [BR:
arut03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117973865
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
HHD_RTEL1
DUF1722
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
117973865
NCBI-ProteinID:
XP_034783187
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All DBs
Position
16:430147..465964
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AA seq
967 aa
AA seq
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MSTDLERMSLNSSSANSVGSGGRTLSANVRKLHNALNLLLNDLEREQFIHCLNVYHSKRN
VFDLVQTLKVILSTPSKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKSDLLASNGNPVAA
DSPGKAMPLAGNANALPGHFQAPPLQHRPSSDSFSTTSEGTVPPTPFPGRAVFQETPSDI
RQVSLKRSKNKEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKVFDR
VTHAEAVKVLKGSKKLSLSVSSAGRIPGGYVTNHVYTWVDPQGRSVSPPPDLTEHSSATL
RRKDGERRSNLQLLQEGDEKKVNVVLDDGRSLGLMIRGGAEYALGIYITGVDRGSASESG
GLKVGDQILEVNGYSFLSVPHDEAVRILKSSRHLMMTIKDVGRLPHARTVVDETKWITGS
QIAESATTGSIAGLSDQAAPAAGKPVFYKGVAGSQVMLSSLISQSRAMLEEQARHLLNEQ
ERQTMVYYLDEYKEGHIGIQALVMALLELLNTHAKFSLLSEVRGLITPQDLERFDSLVLK
REIESMKARQNSGTVLGTDSYSMVSYADTLTSTGSYFTSTTLSSARERLLWLIDLMENES
TLDGSRECLQENADSLPDISLDEVQSLADHPPPFKPPPPPVVSSGGLQRRPSRREQPKRS
SSESSQSGLFFTAPHTSAVDSEAASSEAASSEQTSLSTSPAPAVSKAEVTAHLSLVNHHP
IGPFRPVQSPTRAKSPEPSFSPSPPPPPSHPAPAPPSPDKPLPQPSPSSSASNQHFVMVE
VHRPNSEPDVNEVKPLPQARAALSLLPPASTLCQLSDSGQTLSEDSGVDIADTGGNSKDS
SPLPAKSWGSKDSAGGEGRTESAPKPPGLLEPTSSLVRVMKSATTLGIAIEGGANTRQPL
PRIVTIQRGGSAHNCGKLKVGHVILEVNGATLRGKEHKDAARMIAEAFKTKEKDCIDFLV
TEFNVLL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggatctggaacgcatgtctctgaattcatcctcggccaactccgtgggctcc
ggtgggcgaacgctttcagccaacgtgaggaagctgcacaatgccctcaacctgttactg
aacgacttggagcgggagcagttcatccactgcctgaacgtctaccactccaaaagaaac
gtgttcgacctggtccaaactctgaaagtcatactcagcacgccgagcaagcggcagctc
cttcccatgctgcggctggttatccccaggtcggatcagctcctgtttgatcagtacacc
tcggaaggcctctacctgaaatccgatcttctagctagtaacgggaaccccgtggctgca
gatagcccagggaaagcgatgcctttggccggcaatgctaacgcgctgcccggtcatttc
caggctccccctctacagcaccgtccgtcctcggacagtttcagcaccaccagcgagggg
acagttccgccgactccttttccagggcgagcggtgtttcaagagacccccagcgatatc
agacaggtgtcgctcaaacgaagtaagaacaaagaaggactcgggttcagcatccgcggc
ggttcggagcacggagtgggcatttatgtgtcgctggtggagccgggatcgctggccgag
aaagagggtctcagggtcggcgatcagatcctgagagtgaacgacaaagtgtttgatcga
gtcacacacgcagaggcggtgaaggttctcaagggctctaagaaactgtctctgtcggtg
agctctgcggggcggatccctggcggctacgtgaccaatcacgtgtacacatgggtggac
ccccagggccgcagcgtgtccccgccccctgacctgaccgagcacagcagcgccaccttg
aggcggaaagacggcgagcggcggagcaacctgcagctacttcaggagggggacgagaag
aaggtgaacgtggtgctggatgatggccgctcgctggggttgatgattcggggcggggct
gagtacgccctggggatctacatcaccggagtggaccggggctctgcgtccgagagtggg
gggctcaaggtgggagatcagatcctagaggtgaacgggtacagtttcctcagcgtgcct
catgatgaggcagtgcggatcctcaagtcctctcggcacctcatgatgaccatcaaggac
gtgggccgcctgccgcacgccaggacagtggtggacgagaccaagtggatcaccggctct
cagatcgcagagagcgccaccacgggcagcatcgcggggttgtctgatcaggctgctccc
gctgctggaaagccggtgttctataagggcgtggccggctcccaggtgatgctgtccagt
ctgatcagccaatcacgcgccatgctggaggagcaggcacggcaccttctgaacgagcag
gagaggcagaccatggtgtactacctggacgagtacaaggagggacacatcggcatccag
gccctcgtcatggccctgttagagctgctcaacacacacgccaagttctctctgctgtcg
gaggtgcgggggctgatcactccccaggatctggagcgctttgacagcctggttctgaag
agggagatcgagtccatgaaggcgcggcagaactcgggcacggtgctgggcacagactcc
tactccatggtgtcatacgctgacacactcacatccactgggagctacttcacctccacc
acactcagctctgcgcgggaacgcttgctgtggctcatagacttgatggagaatgagagc
acgctcgatgggtccagagaatgcctgcaggagaatgctgacagtcttcctgacatctct
ctggatgaagtccagtctctggcggaccaccctcctcccttcaagcccccgcctccccca
gtggtcagttcagggggtctgcagcggcgtccgagccggcgagagcagcccaagcggtca
tcgtccgagtcctcccagtcaggcctcttcttcaccgctccccacacctccgcagtggac
agtgaggcagcgtccagcgaggcagcgtccagcgagcaaacctccctctccacctcccca
gccccagccgtcagcaaagcagaggtgaccgcccacctctcgctggtcaaccaccacccc
atcggccccttccgtccagtccagtccccgacccgagctaaatcccctgagccctccttc
tctcccagcccccctcctcccccttctcaccctgccccagccccgcccagtccggacaag
cccctcccccagccctccccctcctcctcggcctccaatcagcacttcgtcatggtggag
gtgcaccgccccaacagcgagcccgacgtcaatgaagtgaagccgctgccccaagccaga
gcggctctctcgctcctccccccagcctccactctgtgccagctctcagacagtggacag
acgctgagcgaggacagcggggtggacattgcggacacagggggcaacagcaaggacagc
agccccctcccagccaagagctggggcagcaaggacagcgcagggggcgagggcaggaca
gagtcagctcctaaaccgcccggtctcttggagcccacttcctcactggtgagggtgatg
aagagcgccaccacgctgggcatcgccatcgagggaggggccaacacacgccagcccctg
ccccgcatcgtcaccatacagaggggcgggtcggcgcacaactgcggcaagctgaaagtg
ggtcacgtgatcctggaggtgaacggcgccacgctccgagggaaggagcacaaggacgcg
gcgcggatgatcgccgaagcgttcaaaaccaaagagaaagactgtatcgatttcctggtg
accgagttcaacgtgttgctttag
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