KEGG   Acipenser ruthenus (sterlet): 117973865
Entry
117973865         CDS       T07327                                 
Name
(RefSeq) whirlin-like isoform X1
  KO
K21879  whirlin
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:arut03037]
    117973865
Cilium and associated proteins [BR:arut03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   117973865
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 USH1C_N HHD_RTEL1 DUF1722 EF-hand_8
Other DBs
NCBI-GeneID: 117973865
NCBI-ProteinID: XP_034783187
LinkDB
Position
16:430147..465964
AA seq 967 aa
MSTDLERMSLNSSSANSVGSGGRTLSANVRKLHNALNLLLNDLEREQFIHCLNVYHSKRN
VFDLVQTLKVILSTPSKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKSDLLASNGNPVAA
DSPGKAMPLAGNANALPGHFQAPPLQHRPSSDSFSTTSEGTVPPTPFPGRAVFQETPSDI
RQVSLKRSKNKEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKVFDR
VTHAEAVKVLKGSKKLSLSVSSAGRIPGGYVTNHVYTWVDPQGRSVSPPPDLTEHSSATL
RRKDGERRSNLQLLQEGDEKKVNVVLDDGRSLGLMIRGGAEYALGIYITGVDRGSASESG
GLKVGDQILEVNGYSFLSVPHDEAVRILKSSRHLMMTIKDVGRLPHARTVVDETKWITGS
QIAESATTGSIAGLSDQAAPAAGKPVFYKGVAGSQVMLSSLISQSRAMLEEQARHLLNEQ
ERQTMVYYLDEYKEGHIGIQALVMALLELLNTHAKFSLLSEVRGLITPQDLERFDSLVLK
REIESMKARQNSGTVLGTDSYSMVSYADTLTSTGSYFTSTTLSSARERLLWLIDLMENES
TLDGSRECLQENADSLPDISLDEVQSLADHPPPFKPPPPPVVSSGGLQRRPSRREQPKRS
SSESSQSGLFFTAPHTSAVDSEAASSEAASSEQTSLSTSPAPAVSKAEVTAHLSLVNHHP
IGPFRPVQSPTRAKSPEPSFSPSPPPPPSHPAPAPPSPDKPLPQPSPSSSASNQHFVMVE
VHRPNSEPDVNEVKPLPQARAALSLLPPASTLCQLSDSGQTLSEDSGVDIADTGGNSKDS
SPLPAKSWGSKDSAGGEGRTESAPKPPGLLEPTSSLVRVMKSATTLGIAIEGGANTRQPL
PRIVTIQRGGSAHNCGKLKVGHVILEVNGATLRGKEHKDAARMIAEAFKTKEKDCIDFLV
TEFNVLL
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgagcacggatctggaacgcatgtctctgaattcatcctcggccaactccgtgggctcc
ggtgggcgaacgctttcagccaacgtgaggaagctgcacaatgccctcaacctgttactg
aacgacttggagcgggagcagttcatccactgcctgaacgtctaccactccaaaagaaac
gtgttcgacctggtccaaactctgaaagtcatactcagcacgccgagcaagcggcagctc
cttcccatgctgcggctggttatccccaggtcggatcagctcctgtttgatcagtacacc
tcggaaggcctctacctgaaatccgatcttctagctagtaacgggaaccccgtggctgca
gatagcccagggaaagcgatgcctttggccggcaatgctaacgcgctgcccggtcatttc
caggctccccctctacagcaccgtccgtcctcggacagtttcagcaccaccagcgagggg
acagttccgccgactccttttccagggcgagcggtgtttcaagagacccccagcgatatc
agacaggtgtcgctcaaacgaagtaagaacaaagaaggactcgggttcagcatccgcggc
ggttcggagcacggagtgggcatttatgtgtcgctggtggagccgggatcgctggccgag
aaagagggtctcagggtcggcgatcagatcctgagagtgaacgacaaagtgtttgatcga
gtcacacacgcagaggcggtgaaggttctcaagggctctaagaaactgtctctgtcggtg
agctctgcggggcggatccctggcggctacgtgaccaatcacgtgtacacatgggtggac
ccccagggccgcagcgtgtccccgccccctgacctgaccgagcacagcagcgccaccttg
aggcggaaagacggcgagcggcggagcaacctgcagctacttcaggagggggacgagaag
aaggtgaacgtggtgctggatgatggccgctcgctggggttgatgattcggggcggggct
gagtacgccctggggatctacatcaccggagtggaccggggctctgcgtccgagagtggg
gggctcaaggtgggagatcagatcctagaggtgaacgggtacagtttcctcagcgtgcct
catgatgaggcagtgcggatcctcaagtcctctcggcacctcatgatgaccatcaaggac
gtgggccgcctgccgcacgccaggacagtggtggacgagaccaagtggatcaccggctct
cagatcgcagagagcgccaccacgggcagcatcgcggggttgtctgatcaggctgctccc
gctgctggaaagccggtgttctataagggcgtggccggctcccaggtgatgctgtccagt
ctgatcagccaatcacgcgccatgctggaggagcaggcacggcaccttctgaacgagcag
gagaggcagaccatggtgtactacctggacgagtacaaggagggacacatcggcatccag
gccctcgtcatggccctgttagagctgctcaacacacacgccaagttctctctgctgtcg
gaggtgcgggggctgatcactccccaggatctggagcgctttgacagcctggttctgaag
agggagatcgagtccatgaaggcgcggcagaactcgggcacggtgctgggcacagactcc
tactccatggtgtcatacgctgacacactcacatccactgggagctacttcacctccacc
acactcagctctgcgcgggaacgcttgctgtggctcatagacttgatggagaatgagagc
acgctcgatgggtccagagaatgcctgcaggagaatgctgacagtcttcctgacatctct
ctggatgaagtccagtctctggcggaccaccctcctcccttcaagcccccgcctccccca
gtggtcagttcagggggtctgcagcggcgtccgagccggcgagagcagcccaagcggtca
tcgtccgagtcctcccagtcaggcctcttcttcaccgctccccacacctccgcagtggac
agtgaggcagcgtccagcgaggcagcgtccagcgagcaaacctccctctccacctcccca
gccccagccgtcagcaaagcagaggtgaccgcccacctctcgctggtcaaccaccacccc
atcggccccttccgtccagtccagtccccgacccgagctaaatcccctgagccctccttc
tctcccagcccccctcctcccccttctcaccctgccccagccccgcccagtccggacaag
cccctcccccagccctccccctcctcctcggcctccaatcagcacttcgtcatggtggag
gtgcaccgccccaacagcgagcccgacgtcaatgaagtgaagccgctgccccaagccaga
gcggctctctcgctcctccccccagcctccactctgtgccagctctcagacagtggacag
acgctgagcgaggacagcggggtggacattgcggacacagggggcaacagcaaggacagc
agccccctcccagccaagagctggggcagcaaggacagcgcagggggcgagggcaggaca
gagtcagctcctaaaccgcccggtctcttggagcccacttcctcactggtgagggtgatg
aagagcgccaccacgctgggcatcgccatcgagggaggggccaacacacgccagcccctg
ccccgcatcgtcaccatacagaggggcgggtcggcgcacaactgcggcaagctgaaagtg
ggtcacgtgatcctggaggtgaacggcgccacgctccgagggaaggagcacaaggacgcg
gcgcggatgatcgccgaagcgttcaaaaccaaagagaaagactgtatcgatttcctggtg
accgagttcaacgtgttgctttag

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