Aeromonas rivipollensis: C7N77_01945
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Entry
C7N77_01945 CDS
T05453
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
arv
Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arv03016
]
C7N77_01945
Enzymes [BR:
arv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C7N77_01945
Transfer RNA biogenesis [BR:
arv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C7N77_01945
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AVP92109
LinkDB
All DBs
Position
389667..391703
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AA seq
678 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQAVVRFVGRVKMFRDRLNVVPDHPLIKDAIKARAKKGLDE
KSFKEGDWVVATLKRHALVDGNFSAEITQLIADKDDHNVPWWVVLARHNLAQIEPADLPE
WNVIEEEELPRRDLTQVPFFTIDGAKTKDMDDALSIRKLDNGWELLVAIADPTAYVAEGS
ELDQEAAKRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARIVSHARLNYDDVSDWAEHGKALDIDAGVLAQLPLMKAMTEARIKWRTEHALVFPD
RPDYDFELGENGAVLAIHVEPRRIANRMIEESMIAANICAGRVLGKSVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFEKEEIASLSGFCALRRWIDSLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSQELTEHLTECRRLHR
RVERDIGDWLYVRYLQAAAGTDQVFNAEIIDVMRAGLKLRLQENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLSEAVEETRSLIAKPAVALVPGPAPEAPAAE
STASESSEAAADAAPKAE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgttattcgcgcctccgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgtaccgagaaagagaaggaagtggccgagccggatgccctgctggag
caggccgtggttcgcttcgtcggccgcgtcaagatgttccgcgaccgcctcaacgtggtg
cctgatcaccccctcatcaaggacgccatcaaggcccgcgccaagaagggtctggacgag
aagtccttcaaggaaggggactgggtggtggcgaccctcaagcgccacgccctggtggat
ggcaacttctccgccgagataacccagctcatcgccgacaaggacgatcacaacgtgccc
tggtgggtagtgctggcgcgccacaacctggcccagatcgagccggcggacctgcccgag
tggaacgtcatcgaagaggaagagctgccccgtcgcgatctgacccaggtgcccttcttc
accatagatggcgccaagaccaaggacatggatgacgccctctccatccgcaaactggac
aacggctgggagctgctggtcgccatcgctgatccgaccgcctatgtggccgaaggcagc
gagctggaccaggaagccgccaagcgcgccttcaccgtctacatgccgggccgcaatgtg
cccatgataccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacaccctgtgcgcacgtctgctgatcgccgaggatggcctgctgctggaagagaccgaa
ttcttcgccgcccgcatcgtctcccacgctcgtctgaactatgacgacgtctccgactgg
gccgagcacggcaaggcgctggacatagacgccggcgtcctggcccaactgccgctgatg
aaagccatgacggaggcgcggatcaagtggcgtaccgagcacgccctggtgttcccggac
cgtcccgactacgacttcgagctgggtgagaacggcgccgtgctggccatccatgtggag
ccgcgccgcatcgccaaccgcatgatcgaagagtcgatgatagccgccaacatctgcgcc
ggtcgcgtgctgggcaagagcgtcggctacggcatcttcaacgtccacacagggttcgat
gaagagtccctcgacggcgccatcgacctgctgaaaagcgccgaggcaccgttcgagaag
gaagagatcgccagcctgtccggtttctgcgccctgcgccgctggatcgacagcctggac
acccgctggctggacggcaagatccgccgcttccagagctatgcactgatgtccgccgag
ccgggtgcccactacggcctggggctggatgcttacgccacctggacttccccgatccgc
aagtacggcgatatggtcaaccatcgtctgctcaaggccgtcatcgccggcaagaccccg
ggtgagcgcccgagccaggagctcaccgagcacctgaccgagtgccgccgcctgcaccgc
agggtggagcgcgacatcggcgactggctctatgtccgttacctccaggccgccgccggt
accgatcaggtgttcaacgccgagatcatcgatgtgatgcgggccggcctcaagctgcgt
ctgcaggagaacggcgccgtggtcttcatgcccgcccgccacatcctggacaacaaggac
aggctggagtgcaattgggacaacggtcgcgtctacctggacaagacagaagtggtctat
gagcttggccagatcatcgaggtgaagctgagcgaggcggtggaagagacccgctccctc
atcgccaaaccggcggtggccctggtgccgggtccggcaccggaagcaccggcagccgag
agcacagcaagcgagagcagcgaggctgcggccgacgcggcccccaaggcggaataa
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