Aeromonas rivipollensis: C7N77_02625
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Entry
C7N77_02625 CDS
T05453
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
arv
Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arv03019
]
C7N77_02625
Messenger RNA biogenesis [BR:
arv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C7N77_02625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AVP92227
LinkDB
All DBs
Position
complement(532772..534691)
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AA seq
639 aa
AA seq
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MKLTTQLVSFITLCVISAMAVVMLGGVFSFRQMGMELQQNRVDSLVEIIDKQLGVTDDQQ
ALARWLPSLLRASHVVELEIRQDSQRVYWFRDVQQQTDESLLIPYSKAIPNQAGMQAEFK
LDRPFKEFEYSMQAMFGISLGVFIVVFGLWYSIRWLRQQLRGAELLAERAQLILDGKLTK
LAHDPDDEWPLSASQALTHLLAELADARKERSRFDNFIRSNAFVDKTTGIGNRLFFDNRL
ENAIMEASVISGGVLLIELAGLEELDPELSGRPSQDLLMEASASIGTFVRKHSGALQARY
AGQVFAVLLPNMSESEMVDGASQLLKSLQRLHWPESVNLETAVYLGAVCYQAEDSLLKVQ
EEAELALKSARLQGHSGWFLYEKSLDEEASNKGTVRWRTLINRRIEEQGISFYLQSVQQE
RDQVVLQQELLIRLHDEQGRELQAGVFMPMAEKAGLLLPLDRLVVTQTLRLLRQRPESSC
PVSLSLSAQNLLNREFQRELFFELFQLPRSINEGLILQLSESQVTRHYEALKRPLRALRM
LGCRLAIDHAGQDVVSTQYIKEFEIHFLKLHPSLVREIHLRQVNQMAVRSLVGGCANTQA
RVIAVGVESGDEWKMLRHLGVHAGQGPWFAEPERLVMPI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccactcaactcgtctcttttattacgctgtgcgtgatctcggccatggcc
gtggtgatgctcggcggggtattcagtttccgccagatggggatggagctgcagcagaac
cgggtcgactccctggtggagatcatcgacaagcagctgggggtgaccgacgatcagcag
gcccttgcccgctggctgccctccctgctgcgggcctcccacgtggtcgagctggagatc
cgccaggacagccagcgggtctactggtttcgcgatgtgcagcagcagacggacgagagt
ctgctgatcccctacagcaaggccattcccaatcaggccggcatgcaggccgagttcaag
ctggacaggcccttcaaggagttcgagtactccatgcaggccatgttcggcatctccctc
ggggtcttcatagtggtgttcggcctctggtactccatccgctggctgcgccagcaactg
cgcggtgccgagctgctggcggagcgcgcccagctgatcctggatggcaagctgaccaag
ctggcccatgatcccgacgacgagtggcccctctccgccagccaggccctcacccatctg
ctggccgaactggccgatgcccgcaaggagcgtagccggttcgacaacttcatccgcagc
aacgccttcgtcgacaagacgaccggcataggcaaccgcctcttcttcgacaaccggctg
gaaaacgccatcatggaggcgagcgtgatcagcggcggtgtcctgctgatcgagctggcg
gggctggaggagctggatcccgagctgagcgggcgcccgagccaggatctgctgatggag
gcgagcgcctccatcggcaccttcgtgcgcaagcacagcggcgccctgcaggcccgctac
gccggccaggtctttgccgtgctgctgcccaacatgtccgagagcgagatggtggacggc
gccagccagctgctcaagagcctgcaacggctgcactggccagagtcggtcaatctggag
acggccgtctacctcggcgccgtctgttatcaggctgaggactccctgctcaaggtgcag
gaagaggccgagctggccctcaagagcgcgcggctgcagggccacagcggctggttccta
tacgagaagtccctggacgaggaggcgagcaacaaggggacagtgcgctggcgcaccctg
atcaaccgtcgcatcgaggagcaggggatctccttctatctgcaatctgtgcagcaggag
cgagatcaggtggtgctgcaacaggagctgctgatccgcctccatgacgagcagggacgg
gagttgcaggcgggggtcttcatgcccatggcggagaaggccggtctgctgttgccgctg
gaccggctggtggtcacccagaccctgcgcctgctgcgccagcgaccggagtcgagctgc
cccgtcagtctgtccctcagcgcccagaacctgctcaaccgtgagttccagcgggagcta
ttcttcgagctgttccagctgccgcgcagcatcaatgaggggctgatactgcaactgtcc
gagtcccaggtgacccgtcactacgaggcgctcaagcggccactgcgggcgctgcgcatg
ctggggtgtcgactggccatagatcacgccggccaggatgtggtgagcacccagtacatc
aaggagttcgagatccacttcctcaagctgcaccccagcctggtgcgggagatccacctt
cgtcaggtcaaccagatggcggtgcgcagcctggtggggggctgtgccaatacccaggcc
cgggtgattgcggtgggggtggagagcggcgacgagtggaagatgctgcgccacctcggc
gtgcacgcgggccaggggccctggttcgccgaaccagagcggctggtgatgcccatatga
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