Aeromonas rivipollensis: C7N77_02890
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Entry
C7N77_02890 CDS
T05453
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
arv
Aeromonas rivipollensis
Pathway
arv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C7N77_02890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arv03021
]
C7N77_02890
03400 DNA repair and recombination proteins [BR:
arv03400
]
C7N77_02890
Enzymes [BR:
arv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C7N77_02890
Transcription machinery [BR:
arv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C7N77_02890
DNA repair and recombination proteins [BR:
arv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C7N77_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AVP92267
LinkDB
All DBs
Position
complement(589942..590931)
Genome browser
AA seq
329 aa
AA seq
DB search
MLGSVTDFLKPRLVDIEQVSPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITHGDE
VEIVNPEHVICHLTGANAEISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPI
VRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVP
EKKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttctgtaacagattttcttaaaccgcggctagttgacatcgagcaagttagc
ccgactcacgcgaaagtgactctcgagccgcttgagcgtggctttggccacacgctgggt
aatgccctgcgtcgtattttgctgtcatctatgcccggttgtgcagttactgaagtcgag
atcgacggagtactgcacgagtacagcagcaaagaaggtgtacaggaagacattcttgaa
atcctgctcaacctgaaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctg
tccctgaccaagtctggaacaggccccgttaccgctggtgatatcactcacggtgatgaa
gtcgagatcgtaaacccggagcacgtaatctgccacctgacaggggccaatgctgagatc
agcatgcgtctgaaagttcagcgcggtcgtggttatgtgcctgcttctgctcgtgttcac
aacgatgatgaagagcgtcctattggccgcctgctgctggactccgcgttcagccccatc
gttcgcatcgcctacaatgttgaggcggcacgtgtggaacagcgcaccgacttggacaag
ctggttatcgacatggagaccaatggtactctggatccggaagaagccattcgccgttct
gccactattttggccgaacagctggaagcctttgtggatctgcgcgatgtcagcgtgccc
gagaagaaagaagagaaacccgagtttgatccgattctgctgcgtcctgtcgatgatttg
gagctgacagttcgttcagcgaactgtctgaaggcagaagctatccactatattggtgat
ctggtacagcgtaccgaagttgagttgcttaaaactcctaacctcggtaagaagtccctg
actgagatcaaggatgtgttggcctcccgtggtctgtctcttggcatgcgccttgagaac
tggccgcccgccagcatcgctgacgagtaa
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