Aeromonas rivipollensis: C7N77_07470
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Entry
C7N77_07470 CDS
T05453
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
arv
Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arv03009
]
C7N77_07470
Enzymes [BR:
arv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C7N77_07470
Ribosome biogenesis [BR:
arv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C7N77_07470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
MTS
RrnaAD
PCMT
Methyltransf_ANTKMT
Methyltransf_15
Methyltransf_12
Methyltransf_23
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_4
PrmA
Methyltransf_37
DOT1
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AVP93051
LinkDB
All DBs
Position
1540486..1541808
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AA seq
440 aa
AA seq
DB search
MAQFFKPQKKSTQPQRIEFTIDSLDHHCVGVGRHQGKAIFVEGALPGELIKARIVDDKKH
YAHAALQQIVTPAANRIDPFCPHYRECGGCSAQHLGEADQQAVKEAGLVSLFERLGNIKA
PALEPVLKGESRAYRRVCRLAIKFDKNGRCTRVGFRRRQSNDLVEVTGCPVLADPLSALI
TPLRECLNRLKSQRELGHAELIQAEQGIMMLLRHTGRPNEADRALLVAFAEAQGIDLYLQ
AADERIEPLRQQFQPSYTLDGLSLAFAPGDFIQVNGPINQSMVTQALAWLGATKDDKVLD
LFCGIGNFTLPLARQAREVVGVEGELAMVARAEENARRNGIDNARFYKADLSGDIVGMSW
AREGFDLVLLDPARPGALEVMSHVAALSPKRVVYVSCNPVTLARDSQVLVKGGYRLARLG
MLDMFPHTGHLESMALFERD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtttttcaagccccaaaagaaatccacccagccccaacgtattgaatttacg
atagacagtctggaccaccactgtgtcggtgtcggccgtcatcagggcaaggccatcttc
gtcgaaggggcactccccggtgagctgatcaaggcacgcatcgtcgatgacaagaagcac
tatgcccacgccgccctgcaacagatagtgaccccggcggccaatcgcatcgatcccttc
tgcccccattatcgcgagtgcggcggttgcagtgcccagcacctcggcgaagcggatcag
caggcggtcaaggaggccgggctggtcagcctgttcgagcgccttggcaacatcaaggcg
ccggcgctcgagcccgtgctcaagggggagtcccgcgcctaccgccgggtctgccgtctc
gccatcaagtttgacaagaacggtcgctgcacccgggtgggcttccgtcgccgtcaatcc
aatgacctggtggaggtgacgggctgccccgtgctggctgatcccctctctgccctcatc
acccccctgcgcgagtgcctcaatcgcttgaagagccagcgcgagctggggcatgcggag
ctcatccaggccgaacagggcatcatgatgctgctgcgccacactggtcgccccaacgag
gcggatcgcgccctgctggtggcgtttgccgaggcccaggggatagacctctaccttcag
gcggcggatgagcgcatcgaacccctgcgccaacaatttcagccgagctacaccctcgat
ggcctgtctcttgcattcgcccctggcgacttcattcaggtcaacggccccatcaaccag
agcatggtgacccaggcgctggcgtggctgggggcgaccaaggatgacaaggtgctggat
ctgttctgcggcatcggcaacttcaccctgccgctggcccgtcaggcccgtgaagtggtg
ggggtagagggggagctcgccatggtggcccgtgccgaggagaatgcccggcgcaacggc
atcgacaacgcccgtttctacaaggcggatttgagcggcgacatagtcggcatgtcctgg
gcgcgggaaggcttcgatctggtgctgctggatccggcccggcccggggcgctggaagtc
atgagccacgtggcggcactttcgcccaagcgggtggtctatgtttcctgtaaccctgtc
accctggcccgggacagccaggtgttggtgaaggggggttatcgactggcccgtctgggg
atgctggacatgttcccccacaccggccatctggagtccatggcgctgtttgaacgggat
tga
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