Aeromonas rivipollensis: C7N77_09315
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Entry
C7N77_09315 CDS
T05453
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
arv
Aeromonas rivipollensis
Pathway
arv03030
DNA replication
arv03430
Mismatch repair
arv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7N77_09315
03430 Mismatch repair
C7N77_09315
03440 Homologous recombination
C7N77_09315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arv03032
]
C7N77_09315
03400 DNA repair and recombination proteins [BR:
arv03400
]
C7N77_09315
Enzymes [BR:
arv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7N77_09315
DNA replication proteins [BR:
arv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7N77_09315
DNA repair and recombination proteins [BR:
arv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7N77_09315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AVP93374
LinkDB
All DBs
Position
1928016..1931495
Genome browser
AA seq
1159 aa
AA seq
DB search
MADPRFVHLRVHSDFSMVDGLQKIGPIVSAAAANNMPALALTDQMNMCGLVRFYGSAHGK
GIKPLVGADFWVQSDELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKGW
LVEHAKGVIVLSGGREGDLGKFLLKGNRQMVEQSLAFYRTHFPDAYYLELLRTGRPDEEV
YLHMAVAIAAEFELPVVATNEVVFLGADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMCELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMSTEDFLVMKSREGL
EDRLAFLFPDPQVRAAKRGEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIEHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDSGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKKSFALL
QRFETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPAEM
AKQRSGFEEGAVKNGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILSARDQDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSSELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQRIDERFFPRLCEILEPARAGVCPVQVNYRRPGSRARLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcctcgcttcgtccacctgcgggtccactccgacttctccatggtcgatggc
ctgcaaaagattggccccatcgtctcggcggccgcggccaacaatatgccggccctggcc
ctgaccgaccagatgaacatgtgcggcctggtgcgcttctatggctcggcccatggcaag
gggatcaagcccctggtcggggcggatttctgggtgcagagcgatgagctcggcgacgag
cagttccgcctcaccctgctcgccatggacaacgacggctaccagaacatcaccctgctc
atctcccgcggctaccagcgcggtcacgtgcaggggcgccccgtcatcgacaagggctgg
ctggtcgaacatgccaagggggtgatagtgctctcaggcggtcgcgagggggatctgggc
aagttcctgctcaagggcaaccgccagatggtggagcagagcctcgccttctaccggact
cacttcccggatgcctactacctggagctgctgcgtaccggtcgacccgatgaagaggtc
tatctgcacatggcggtggccatcgccgccgagttcgagctgcccgtggtggctaccaac
gaggtggtgttcctcggggccgacgacttcgatgcccacgagatccgggtcgccatccac
gacggctacaccctgatggacaagcgccgtccgcgccgctacagcccgcagcagtacctg
cgcagccaggaagaaatgtgcgagctgtttgccgacattcccgaggcgctggaaaacacg
gtggagatcgccaagcgctgcaacgtgactgtgcgtctgggcgaatacttcctgccgaac
ttcccgaccggtgacatgagcaccgaagacttcctggtgatgaagtccagggaggggctg
gaggaccgtctggccttcctgttcccggatccgcaagtgcgcgccgccaagcgcggcgag
tacgacgagcgcctcgacatcgagctcaaggtgattaaccagatgggcttcccgggttac
ttcctcatagtgatggagtttatccagtggtccaaggacaacggcatccccgtcggcccg
ggccggggatcgggggcgggctccctggtggcctacgccctcaagatcaccgatctggat
cccctcgagtttgatctgctgttcgaacgtttcctcaaccccgagcgggtctccatgccc
gacttcgacgtcgacttctgcatggacagacgggacgaggtgatagagcacgtctccgag
atgtatggccgggaggcggtgtcccagatcatcaccttcggcagcatggcggccaaggcg
gtggtgcgggacgtgggccgggtgctgggccacgcctatggtttcgtggatcgcatctcc
aagctcattccgccggatccgggcatgacgctggccaaggcattcgaggccgagcccaag
ctgccggagctctacgagcaggacgaggaggtcaaggacctcatcgacatggcgcgccga
ctggaaggtgtggtgcgcaacgccggcaaacacgccggtggtgtggtgatagcccccacc
aagatcaccgacttcgcgccgctctactgcgatgactccggccatcaccctgttacccag
ttcgacaagaacgacgtggagtacgcgggcctggtgaagttcgacttcctgggactgagg
accctcaccatcatcgattgggcgctcggcatgatcaacccgcgcctggccaaggagggc
aagccgccggtcgacatcgccgccatccccatcgacgacaagaagtcgttcgcgctcttg
cagcgcttcgagaccacggcggtgttccagctcgaatcccgcggcatgaaggatctgatc
aagcggctgcagcccgactgcttcgaagacatgatcgccctggtggccctgttccgtccg
ggcccgctgcagtccggcatggtggacaacttcatcgagcgcaagcacggcaaggaggcc
atctcctacccggacgagaagtggcagcacgagagcctcaaacccatactggagcccacc
tacggcatcatcctctaccaggagcaggtgatgcagatagcccaggtgctggcgggctac
accctgggcggcgcggacatgctgcgccgggccatgggcaagaagaaccccgccgagatg
gccaagcagcgttccggcttcgaggaaggggcggtcaagaacggcgtcgacggcgagctg
gcgatcaagatcttcgatctggtggagaagtttgcgggctacggcttcaacaagtcccac
tccgccgcctatgcgctggtctcctaccagaccctctggctcaagacccacttcccggcc
gagttcatggcggcggtgatgaccgccgacatggacaacaccgacaagatagtgacgcta
gtggacgagtgccagcgcatggggctcaccgtgataccgccggatgtgaacacaggtcgc
tatcgcttctcggtcaacgaagatggccatatcgtctacggcataggcgcggtgaaaggg
gtgggcgagggccccatagatgcgattctcagcgcgcgggatcaggacggccccttccgg
gatctgttcgacttctgcaacagggtcgacatcaagaagctcaacaagcgggtgatggaa
aaactcatcctctccggcgccatggaccgactgggcccgcaccgcgccgccctgatggcg
acgctggaagaggccatgcgcgccgccgagcagcacgccaaggcgcaggcggtggggcag
gtcgacatgttcggcgtgctcaccgaggagatagacgacgtcaagaaggcgttcgccaac
gtgccgcactggcccgacaaagtgtggctggaaggggagcgcgagaccctcggactctac
ctcaccggtcaccccatcaaccagtacagcagcgagctgcgtcgctacacctcgggccgt
ctgtgcgatctgcatcccacctcccgggatacggtgaccacggcggcggggctggtgatc
gcggcccgcagcatggtgaccaagcgcggcaacaagatggggatcttcaccctggacgac
agatccggccgtctggatgtgaccctcttcagtgaagcgctggaaaaatacgaagaattg
atgcaaaaagaccgtattttagtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgcgaattgctggatatcaacgatgcgagggagcgtttcgcc
agggcgatccgcatttctctcgatgaacaacgcattgacgaacgctttttcccgcgtttg
tgcgagattttggagcccgcccgtgccggagtctgtccggttcaggtaaactatcgtcgg
cccggctcccgggcgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgagtcctgcttggacgagagcgggttgaattggtttttgattag
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